Biochemistry: Latest Articles (ACS Publications)

Microsecond Time-Resolved Circular Dichroism of Rhodopsin Photointermediates

Yiren Gu Thomas et al — Tue, 24 Nov 2009 19:54:56 GMT

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Competition between Co(NH3)63+ and Inner Sphere Mg2+ Ions in the HDV Ribozyme

Bo Gong et al — Tue, 24 Nov 2009 19:54:09 GMT

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Use of 3-Aminotyrosine To Examine the Pathway Dependence of Radical Propagation in Escherichia coli Ribonucleotide Reductase

Ellen C. Minnihan et al — Tue, 24 Nov 2009 19:27:15 GMT

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Nonspecificity of Binding of γ-Secretase Modulators to the Amyloid Precursor Protein

Andrew J. Beel et al — Tue, 24 Nov 2009 14:01:55 GMT

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Glutaminyl Cyclases Display Significant Catalytic Proficiency for Glutamyl Substrates

Franziska Seifert et al — Tue, 24 Nov 2009 13:23:32 GMT

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The Human Papillomavirus E7−E2 Interaction Mechanism in Vitro Reveals a Finely Tuned System for Modulating Available E7 and E2 Proteins

Clara Smal et al — Tue, 24 Nov 2009 13:20:12 GMT

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Dss1 Regulates Interaction of Brh2 with DNA

Qingwen Zhou et al — Mon, 23 Nov 2009 14:23:43 GMT

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Asp157 Is Required for the Function of PsbO, the Photosystem II Manganese Stabilizing Protein

Hana Popelkova et al — Mon, 23 Nov 2009 14:03:23 GMT

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Mechanistic Studies of para-Substituted N,N′-Dibenzyl-1,4-diaminobutanes as Substrates for a Mammalian Polyamine Oxidase

Michelle Henderson Pozzi et al — Mon, 23 Nov 2009 14:00:21 GMT

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Solution Structure of a Covalently Bound Pyrrolo[2,1-c][1,4]benzodiazepine−Benzimidazole Hybrid to a 10mer DNA Duplex

Michael Rettig et al — Mon, 23 Nov 2009 13:58:12 GMT

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Peptidomics of Prolyl Endopeptidase in the Central Nervous System

Whitney M. Nolte et al — Mon, 23 Nov 2009 13:56:05 GMT

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Biochemical Characterization of the RNase II Family of Exoribonucleases from the Human Pathogens Salmonella typhimurium and Streptococcus pneumoniae

Susana Domingues et al — Mon, 23 Nov 2009 13:55:56 GMT

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Contrasting Synergistic Anion Effects in Vanadium(V) Binding to Nicatransferrin versus Human Serum Transferrin

Jean P. Gaffney et al — Fri, 20 Nov 2009 16:26:57 GMT

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Phosphorylation of Serine 205 by the Protein Kinase CK2 Persists on Pax3-FOXO1, but Not Pax3, throughout Early Myogenic Differentiation

Kevin N. Dietz et al — Fri, 20 Nov 2009 16:26:26 GMT

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Enhancing Nitrite Reductase Activity of Modified Hemoglobin: Bis-tetramers and Their PEGylated Derivatives

Francine E. Lui et al — Fri, 20 Nov 2009 13:23:20 GMT

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Reactions of the Flavin Mononucleotide in Complex I: A Combined Mechanism Describes NADH Oxidation Coupled to the Reduction of APAD+, Ferricyanide, or Molecular Oxygen

James A. Birrell et al — Thu, 19 Nov 2009 18:21:57 GMT

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Kinetic Analysis of Cysteine Desulfurase CD0387 from Synechocystis sp. PCC 6803: Formation of the Persulfide Intermediate

Elham Behshad et al — Thu, 19 Nov 2009 16:56:36 GMT

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Evidence for the Involvement of Human DNA Polymerase N in the Repair of DNA Interstrand Cross-Links

Laura Zietlow et al — Thu, 19 Nov 2009 16:53:59 GMT

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Physical Instability of a Therapeutic Fc Fusion Protein: Domain Contributions to Conformational and Colloidal Stability

Jonas L. Fast et al — Thu, 19 Nov 2009 14:10:56 GMT

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Association of Phosphatidic Acid with the Bovine Mitochondrial ADP/ATP Carrier

Richard M. Epand et al — Wed, 18 Nov 2009 21:20:27 GMT

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Characterization of a Key Neutralizing Epitope on Pertussis Toxin Recognized by Monoclonal Antibody 1B7

Jamie N. Sutherland et al — Wed, 18 Nov 2009 21:12:54 GMT

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Insight into the Mechanism of Inactivation of Ribonucleotide Reductase by Gemcitabine 5′-Diphosphate in the Presence or Absence of Reductant

Erin Artin et al — Wed, 18 Nov 2009 17:46:34 GMT

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Distinct Pose of Discodermolide in Taxol Binding Pocket Drives a Complementary Mode of Microtubule Stabilization

Marina Khrapunovich-Baine et al — Wed, 18 Nov 2009 17:40:07 GMT

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Mechanism of Inactivation of Human Ribonucleotide Reductase with p53R2 by Gemcitabine 5′-Diphosphate

Jun Wang et al — Wed, 18 Nov 2009 17:37:08 GMT

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Heme Iron Nitrosyl Complex of MauG Reveals an Efficient Redox Equilibrium between Hemes with Only One Heme Exclusively Binding Exogenous Ligands

Rong Fu et al — Wed, 18 Nov 2009 16:31:07 GMT

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Evidence of Kinetic Control of Ligand Binding and Staged Product Release in MurA (Enolpyruvyl UDP-GlcNAc Synthase)-Catalyzed Reactions

Sean G. Jackson et al — Wed, 18 Nov 2009 14:28:14 GMT

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Dissociation Kinetics of the GroEL−gp31 Chaperonin Complex Studied with Förster Resonance Energy Transfer

Stéphane Calmat et al — Wed, 18 Nov 2009 14:27:10 GMT

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Apo and Nickel-Bound Forms of the Pyrococcus horikoshii Species of the Metalloregulatory Protein: NikR Characterized by Molecular Dynamics Simulations

Daniel J. Sindhikara et al — Tue, 17 Nov 2009 14:46:49 GMT

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Influence of Proline upon the Folding and Geometry of the WALP19 Transmembrane Peptide

Rachel Thomas et al — Tue, 17 Nov 2009 14:45:33 GMT

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Interaction between Na+ Ion and Carboxylates of the PomA−PomB Stator Unit Studied by ATR-FTIR Spectroscopy

Yuki Sudo et al — Tue, 17 Nov 2009 14:44:48 GMT

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The Heparin Binding Motif of Endostatin Mediates Its Interaction with Receptor Nucleolin

Yan Fu et al — Tue, 17 Nov 2009 14:43:46 GMT

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Bolaamphiphile-Class Surfactants Can Stabilize and Support the Function of Solubilized Integral Membrane Proteins

Qingxin Li et al — Tue, 17 Nov 2009 13:51:56 GMT

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Betaglycan has Two Independent Domains Required for High Affinity TGF-β Binding: Proteolytic Cleavage Separates the Domains and Inactivates the Neutralizing Activity of the Soluble Receptor

Valentín Mendoza et al — Tue, 17 Nov 2009 13:50:55 GMT

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Molecularly Defined Antibody Conjugation through a Selenocysteine Interface

Thomas Hofer et al — Tue, 17 Nov 2009 13:50:47 GMT

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Steroidogenic Acute Regulatory Protein Has a More Open Conformation Than the Independently Folded Smaller Subdomains

Himangshu S. Bose et al — Mon, 16 Nov 2009 19:31:43 GMT

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The IQ Domains in Neuromodulin and PEP19 Represent Two Major Functional Classes

D. J. Black et al — Mon, 16 Nov 2009 17:04:04 GMT

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Role of the Nuclear Receptors HNF4α, PPARα, and LXRs in the TNFα-Mediated Inhibition of Human Apolipoprotein A-I Gene Expression in HepG2 Cells

Denis A. Mogilenko et al — Mon, 16 Nov 2009 15:15:53 GMT

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Biophysical Analyses of Synthetic Amyloid-β(1−42) Aggregates before and after Covalent Cross-Linking. Implications for Deducing the Structure of Endogenous Amyloid-β Oligomers

Brenda D. Moore et al — Mon, 16 Nov 2009 14:26:41 GMT

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The Major Surface Carbohydrates of the Echinococcus granulosus Cyst: Mucin-Type O-Glycans Decorated by Novel Galactose-Based Structures

Alvaro Díaz et al — Mon, 16 Nov 2009 14:23:40 GMT

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Cyclooxygenase Competitive Inhibitors Alter Tyrosyl Radical Dynamics in Prostaglandin H Synthase-2

Gang Wu et al — Fri, 13 Nov 2009 20:34:43 GMT

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Preclusion of Irreversible Destruction of Dr Adhesin Structures by a High Activation Barrier for the Unfolding Stage of the Fimbrial DraE Subunit

Rafał Pia̧tek et al — Fri, 13 Nov 2009 20:10:13 GMT

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Metal Binding Affinities of Arabidopsis Zinc and Copper Transporters: Selectivities Match the Relative, but Not the Absolute, Affinities of their Amino-Terminal Domains

Matthias Zimmermann et al — Fri, 13 Nov 2009 19:41:43 GMT

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Solution Structure and Membrane Interactions of the Antimicrobial Peptide Fallaxidin 4.1a: An NMR and QCM Study

Patrick J. Sherman et al — Fri, 13 Nov 2009 15:00:45 GMT

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Erratum: Correction to Novel Domain Arrangement in the Crystal Structure of a Truncated Acetyl-CoA Synthase from Moorella thermoacetica

Anne Volbeda et al — Fri, 13 Nov 2009 19:40:26 GMT

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The Energy Landscape of 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthase

Peng Tao et al — Fri, 13 Nov 2009 19:35:25 GMT

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Studies of the Expression of Human Poly(ADP-ribose) Polymerase-1 in Saccharomyces cerevisiae and Identification of PARP-1 Substrates by Yeast Proteome Microarray Screening

Zhihua Tao et al — Fri, 13 Nov 2009 14:59:25 GMT

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Molecular Basis of Association of Receptor Activity-Modifying Protein 3 with the Family B G Protein-Coupled Secretin Receptor

Kaleeckal G. Harikumar et al — Fri, 13 Nov 2009 14:58:03 GMT

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Role of a Conserved Active Site Cation−π Interaction in Escherichia coli Serine Hydroxymethyltransferase

Mirella Vivoli et al — Fri, 13 Nov 2009 14:45:09 GMT

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Kinetic Stability of the Flavin Semiquinone in Photolyase and Cryptochrome-DASH

Michael J. Damiani et al — Thu, 12 Nov 2009 20:11:48 GMT

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A Peptide Hairpin Inhibitor of Amyloid β-Protein Oligomerization and Fibrillogenesis

Ghiam Yamin et al — Thu, 12 Nov 2009 20:09:57 GMT

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A Transition Path Ensemble Study Reveals a Linchpin Role for Mg2+ during Rate-Limiting ADP Release from Protein Kinase A

Ilja V. Khavrutskii et al — Thu, 12 Nov 2009 13:17:15 GMT

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Structural, Thermodynamic, and Kinetic Effects of a Phosphomimetic Mutation in Dynein Light Chain LC8

Gregory Benison et al — Thu, 12 Nov 2009 12:54:57 GMT

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NMR Investigation of DNA Primer-Template Models: Guanine Templates Are Less Prone to Strand Slippage upon Misincorporation

Lai Man Chi et al — Thu, 12 Nov 2009 12:53:02 GMT

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Reversible Chemical Step and Rate-Limiting Enzyme Regeneration in the Reaction Catalyzed by Formamidopyrimidine-DNA Glycosylase

Nikita A. Kuznetsov et al — Thu, 12 Nov 2009 12:51:51 GMT

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Sensation and Signaling of α-Ketoglutarate and Adenylylate Energy Charge by the Escherichia coli PII Signal Transduction Protein Require Cooperation of the Three Ligand-Binding Sites within the PII Trimer

Peng Jiang et al — Wed, 11 Nov 2009 20:27:33 GMT

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The 8 and 5 kDa Fragments of Plasma Gelsolin Form Amyloid Fibrils by a Nucleated Polymerization Mechanism, while the 68 kDa Fragment Is Not Amyloidogenic

James P. Solomon et al — Wed, 11 Nov 2009 18:20:39 GMT

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α-Ketoglutarate Controls the Ability of the Escherichia coli PII Signal Transduction Protein To Regulate the Activities of NRII (NtrB) but Does Not Control the Binding of PII to NRII

Peng Jiang et al — Wed, 11 Nov 2009 18:19:21 GMT

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Purification and Characterization of the Lipid A Disaccharide Synthase (LpxB) from Escherichia coli, a Peripheral Membrane Protein

Louis E. Metzger et al — Wed, 11 Nov 2009 15:18:34 GMT

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Kinetic Mechanism for the Flipping and Excision of 1,N6-Ethenoadenine by Human Alkyladenine DNA Glycosylase

Abigail E. Wolfe et al — Wed, 11 Nov 2009 15:17:43 GMT

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Characterization of a Ras Mutant with Identical GDP- and GTP-Bound Structures

Bradley Ford et al — Wed, 11 Nov 2009 15:16:22 GMT

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Pre-Steady-State Kinetic Analysis of cis-3-Chloroacrylic Acid Dehalogenase: Analysis and Implications

Brooklyn A. Robertson et al — Wed, 11 Nov 2009 15:16:03 GMT

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ATP-Induced Conformational Changes in Hsp70: Molecular Dynamics and Experimental Validation of an in Silico Predicted Conformation

Hyung-June Woo et al — Wed, 11 Nov 2009 15:14:28 GMT

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Orientational Landscapes of Peptides in Membranes: Prediction of 2H NMR Couplings in a Dynamic Context

Santi Esteban-Martín et al — Wed, 11 Nov 2009 15:10:21 GMT

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Mechanism of Fibril Formation by a 39-Residue Peptide (PAPf39) from Human Prostatic Acidic Phosphatase

Zhuqiu Ye et al — Tue, 10 Nov 2009 20:04:39 GMT

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Thermodynamic Aspects of Coupled Binding and Folding of an Intrinsically Disordered Protein: A Computational Alanine Scanning Study

L. Michel Espinoza-Fonseca — Tue, 10 Nov 2009 19:49:47 GMT

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Hepatitis C Virus NS3 Protease Is Activated by Low Concentrations of Protease Inhibitors

Göran Dahl et al — Tue, 10 Nov 2009 19:49:05 GMT

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CooC1 from Carboxydothermus hydrogenoformans Is a Nickel-Binding ATPase

Jae-Hun Jeoung et al — Tue, 10 Nov 2009 19:48:06 GMT

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Repression of Translation of Human Estrogen Receptor α by G-Quadruplex Formation

Graham D. Balkwill et al — Tue, 10 Nov 2009 19:47:13 GMT

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Binding of Short Oligonucleotides to RNA: Studies of the Binding of Common RNA Structural Motifs to Isoenergetic Microarrays

Elzbieta Kierzek — Tue, 10 Nov 2009 19:46:40 GMT

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Allosteric Interactions Direct Binding and Phosphorylation of ASF/SF2 by SRPK1

Nhat Huynh et al — Tue, 10 Nov 2009 19:42:00 GMT

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Kinetic Characterization of Xenobiotic Reductase A from Pseudomonas putida 86

Olivia Spiegelhauer et al — Tue, 10 Nov 2009 15:53:22 GMT

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Electron Transfer from Cytochrome c2 to the Reaction Center: A Transition State Model for Ionic Strength Effects Due to Neutral Mutations

Edward C. Abresch et al — Tue, 10 Nov 2009 15:46:28 GMT

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The Role of Key Amino Acids in the Photoactivation Pathway of the Synechocystis Slr1694 BLUF Domain

Cosimo Bonetti et al — Tue, 10 Nov 2009 15:42:45 GMT

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Computation-Facilitated Assignment of the Function in the Enolase Superfamily: A Regiochemically Distinct Galactarate Dehydratase from Oceanobacillus iheyensis

John F. Rakus et al — Tue, 10 Nov 2009 13:56:01 GMT

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Morphing Activity between Structurally Similar Enzymes: From Heme-Free Bromoperoxidase to Lipase

Bo Chen et al — Tue, 10 Nov 2009 13:54:26 GMT

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Assembly with the Na,K-ATPase α1 Subunit Is Required for Export of β1 and β2 Subunits from the Endoplasmic Reticulum

Elmira Tokhtaeva et al — Tue, 10 Nov 2009 13:52:56 GMT

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Distinguishing between Smooth and Rough Free Energy Barriers in Protein Folding

Stefano Gianni et al — Fri, 06 Nov 2009 14:42:06 GMT

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The Structural Basis of Pregnane X Receptor Binding Promiscuity

Chi-Ho Ngan et al — Thu, 05 Nov 2009 18:12:07 GMT

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A Sequence-Dependent Emissive Ligand for the Selective Detection of Thymidine-Related Single Nucleotide Polymorphisms in Human Gene Sequence

Arivazhagan Rajendran et al — Tue, 23 Dec 2008 19:40:30 GMT

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A Peptide Tag System for Facile Purification and Single-Molecule Immobilization

Jin Huang et al — Tue, 24 Nov 2009 13:23:27 GMT

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The 1.4 Å Crystal Structure of the Class D β-Lactamase OXA-1 Complexed with Doripenem

Kyle D. Schneider et al — Tue, 24 Nov 2009 13:22:44 GMT

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Design and Pharmacological Characterization of Inhibitors of Amantadine-Resistant Mutants of the M2 Ion Channel of Influenza A Virus

Victoria Balannik et al — Tue, 24 Nov 2009 13:20:53 GMT

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Buffers May Adversely Affect Model Lipid Membranes: A Cautionary Tale

Teresa Peiró-Salvador et al — Tue, 24 Nov 2009 05:11:18 GMT

Biochemistry, Volume 48, Issue 47, Page 11149-11151, December 1, 2009.

Reduced Digestive Vacuolar Accumulation of Chloroquine Is Not Linked to Resistance to Chloroquine Toxicity

Mynthia Cabrera et al — Tue, 24 Nov 2009 05:10:16 GMT

Biochemistry, Volume 48, Issue 47, Page 11152-11154, December 1, 2009.

Assembly of Hybrid Bacteriophage Qβ Virus-like Particles

Steven D. Brown et al — Tue, 24 Nov 2009 05:05:47 GMT

Biochemistry, Volume 48, Issue 47, Page 11155-11157, December 1, 2009.

Interaction of the Disordered Yersinia Effector Protein YopE with Its Cognate Chaperone SycE

Xin Hu et al — Tue, 24 Nov 2009 06:27:02 GMT

Biochemistry, Volume 48, Issue 47, Page 11158-11160, December 1, 2009.

The Mechanistic Architecture of Thermostable Pyrococcus furiosus Family B DNA Polymerase Motif A and Its Interaction with the dNTP Substrate

Edward M. Kennedy et al — Tue, 24 Nov 2009 05:10:36 GMT

Biochemistry, Volume 48, Issue 47, Page 11161-11168, December 1, 2009.

Duplex Formation at the 5′ End Affects the Quadruplex Conformation of the Human Telomeric Repeat Overhang in Sodium but Not in Potassium

Timur I. Gaynutdinov et al — Tue, 24 Nov 2009 06:33:35 GMT

Biochemistry, Volume 48, Issue 47, Page 11169-11177, December 1, 2009.

Kinetics of Stop Codon Recognition by Release Factor 1

Byron Hetrick et al — Tue, 24 Nov 2009 06:30:20 GMT

Biochemistry, Volume 48, Issue 47, Page 11178-11184, December 1, 2009.

Interaction of the Tim44 C-Terminal Domain with Negatively Charged Phospholipids

Milit Marom et al — Tue, 24 Nov 2009 05:04:51 GMT

Biochemistry, Volume 48, Issue 47, Page 11185-11195, December 1, 2009.

Dynamics of Activation of Lecithin:Cholesterol Acyltransferase by Apolipoprotein A-I

Martin K. Jones et al — Tue, 24 Nov 2009 05:06:21 GMT

Biochemistry, Volume 48, Issue 47, Page 11196-11210, December 1, 2009.

Nuclear Magnetic Resonance Structural Characterization of Substrates Bound to the α-2,6-Sialyltransferase, ST6Gal-I

Shan Liu et al — Tue, 24 Nov 2009 06:03:45 GMT

Biochemistry, Volume 48, Issue 47, Page 11211-11219, December 1, 2009.

NMR Spectroscopic Characterization of the Sialyltransferase CstII from Campylobacter jejuni: Histidine 188 Is the General Base

Patrick H. W. Chan et al — Tue, 24 Nov 2009 05:01:26 GMT

Biochemistry, Volume 48, Issue 47, Page 11220-11230, December 1, 2009.

Coupling of the Distal Hydrogen Bond Network to the Exogenous Ligand in Substrate-Bound, Resting State Human Heme Oxygenase

Dungeng Peng et al — Tue, 24 Nov 2009 05:16:49 GMT

Biochemistry, Volume 48, Issue 47, Page 11231-11242, December 1, 2009.

Identification of the Rate-Determining Step of tRNA-Guanine Transglycosylase from Escherichia coli

George A. Garcia et al — Tue, 24 Nov 2009 05:50:39 GMT

Biochemistry, Volume 48, Issue 47, Page 11243-11251, December 1, 2009.

Critical Role of Tryptophan 154 for the Activity and Stability of Class D β-Lactamases

Stéphane Baurin et al — Tue, 24 Nov 2009 06:20:30 GMT

Biochemistry, Volume 48, Issue 47, Page 11252-11263, December 1, 2009.

Fluorescence and UV Resonance Raman Study of Peptide−Vesicle Interactions of Human Cathelicidin LL-37 and Its F6W and F17W Mutants

Jonathan E. Gable et al — Tue, 24 Nov 2009 05:12:24 GMT

Biochemistry, Volume 48, Issue 47, Page 11264-11272, December 1, 2009.

A FRET-Based Method for Probing the Conformational Behavior of an Intrinsically Disordered Repeat Domain from Bordetella pertussis Adenylate Cyclase

Géza R. Szilvay et al — Tue, 24 Nov 2009 05:15:48 GMT

Biochemistry, Volume 48, Issue 47, Page 11273-11282, December 1, 2009.

Structural Basis of the Aberrant Receptor Binding Properties of Hagfish and Lamprey Insulins

Waseem Sajid et al — Tue, 24 Nov 2009 06:16:37 GMT

Biochemistry, Volume 48, Issue 47, Page 11283-11295, December 1, 2009.

Mechanism of the Translation Termination Reaction on the Ribosome

Stefan Trobro et al — Tue, 24 Nov 2009 05:19:32 GMT

Biochemistry, Volume 48, Issue 47, Page 11296-11303, December 1, 2009.

Dynamics and Energetics of the Base Flipping Conformation Studied with Base Pair-Mimic Nucleosides

Shu-ichi Nakano et al — Tue, 24 Nov 2009 05:14:15 GMT

Biochemistry, Volume 48, Issue 47, Page 11304-11311, December 1, 2009.

pH-Dependent Configurations of a 5-Chlorouracil-Guanine Base Pair

Jacob A. Theruvathu et al — Tue, 24 Nov 2009 05:00:26 GMT

Biochemistry, Volume 48, Issue 47, Page 11312-11318, December 1, 2009.

Calmodulin Is a Nonessential Activator of Secretory Phospholipase A2

Lidija Kovačič et al — Tue, 24 Nov 2009 05:05:10 GMT

Biochemistry, Volume 48, Issue 47, Page 11319-11328, December 1, 2009.