Electronic and Nuclear Magnetic Resonance Spectroscopic Features of the 1‘,4‘-Iminopyrimidine Tautomeric Form of Thiamin Diphosphate, a Novel Intermediate on Enzymes Requiring This Coenzyme

Ahmet T. Baykal, Lazaros Kakalis, and Frank Jordan*
Department of Chemistry, Rutgers, the State University, Newark, New Jersey 07102
Biochemistry, 2006, 45 (24), pp 7522–7528
DOI: 10.1021/bi060395k
Publication Date (Web): May 18, 2006
Copyright © 2006 American Chemical Society

 Supported by National Institutes of Health Grants GM050380 and GM062330.

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*

 To whom correspondence should be addressed:  e-mail, frjordan@ newark.rutgers.edu; tel, 973-353-5470; fax, 973-353-1264.

Abstract

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Appropriate compounds were synthesized to create models for the 1‘,4‘-imino tautomer of the 4‘-aminopyrimidine ring of thiamin diphosphate recently found to exist on the pathway of enzymatic reactions requiring this cofactor [Jordan, F., and Nemeria, N. S. (2005) Bioorg. Chem. 33, 190−215]. The N1-methyl-4-aminopyrimidinium compounds synthesized on treatment with a strong base produce the 1,4-imino tautomer whose UV spectrum indicates a maximum between 300 and 320 nm, depending on the absence or presence of a methyl group at the 4-amino nitrogen. The λmax found is in the same wavelength range as the positive circular dichroism band observed on several enzymes and showed a very strong dependence on solvent dielectric constant. To help with the 15N chemical shift assignments, the model compounds were specifically labeled with 15N at the amino nitrogen atom. The chemical shift of the amino nitrogen was deshielded by N1-methylation and then dramatically further deshielded by more than 100 ppm on formation of the 1,4-iminopyrimidine tautomer. Both the UV spectroscopic values and the 15N chemical shift for the 1,4-iminopyrimidine tautomer should serve as useful guides to the assignment of enzyme-bound signals.

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History

  • Published In Issue June 20, 2006
  • Received February 27, 2006
    Revised Manuscript Received April 18, 2006

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