Structures of the Nω-Hydroxy-l-Arginine Complex of Inducible Nitric Oxide Synthase Oxygenase Dimer with Active and Inactive Pterins,

Brian R. Crane,§ Andrew S. Arvai,§ Sanjay Ghosh, Elizabeth D. Getzoff,§ Dennis J. Stuehr, and John A. Tainer*§
The Department of Molecular Biology and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, California 92037, and The Department of Immunology, The Cleveland Clinic, Cleveland, OH, 44106
Biochemistry, 2000, 39 (16), pp 4608–4621
DOI: 10.1021/bi992409a
Publication Date (Web): March 31, 2000
Copyright © 2000 American Chemical Society

 Supported by National Institute of Health Grants HL58883 (E.D.G.) and CA53914 (D.J.S.), fellowship grants from the Helen Hay Whitney Foundation (B.R.C.), and the Skaggs Institute for Research (A.S.A. and B.R.C.).

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 PDB codes for the structures reported within:  NHA−H4B, 1DWX; NHA−H2B, 1DWW; NHA−4-amino-H4B, 1DWV.

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§

 The Scripps Research Institute.

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 Present address:  The Beckman Institute, The California Institute of Technology, Pasadena California 91125

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 The Cleveland Clinic.

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*

 To whom correspondence should be addressed. Telephone:  (858)784-8119. Fax:  (858)784-2289. E-mail:  jat@scripps.edu.

Abstract

Nitric oxide synthases (NOSs) catalyze two mechanistically distinct, tetrahydrobiopterin (H4B)-dependent, heme-based oxidations that first convert l-arginine (l-Arg) to Nω-hydroxy-l-arginine (NHA) and then NHA to l-citrulline and nitric oxide. Structures of the murine inducible NOS oxygenase domain (iNOSox) complexed with NHA indicate that NHA and l-Arg both bind with the same conformation adjacent to the heme iron and neither interacts directly with it nor with H4B. Steric restriction of dioxygen binding to the heme in the NHA complex suggests either small conformational adjustments in the ternary complex or a concerted reaction of dioxygen with NHA and the heme iron. Interactions of the NHA hydroxyl with active center β-structure and the heme ring polarize and distort the hydroxyguanidinium to increase substrate reactivity. Steric constraints in the active center rule against superoxo-iron accepting a hydrogen atom from the NHA hydroxyl in their initial reaction, but support an Fe(III)-peroxo-NHA radical conjugate as an intermediate. However, our structures do not exclude an oxo-iron intermediate participating in either l-Arg or NHA oxidation. Identical binding modes for active H4B, the inactive quinonoid-dihydrobiopterin (q-H2B), and inactive 4-amino-H4B indicate that conformational differences cannot explain pterin inactivity. Different redox and/or protonation states of q-H2B and 4-amino-H4B relative to H4B likely affect their ability to electronically influence the heme and/or undergo redox reactions during NOS catalysis. On the basis of these structures, we propose a testable mechanism where neutral H4B transfers both an electron and a 3,4-amide proton to the heme during the first step of NO synthesis.

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History

  • Published In Issue April 25, 2000
  • Received October 18, 1999
    Revised Manuscript Received December 17, 1999

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