Crystallographic Structure Determination: An Experiment for Organic Analysis and Other Nontraditional Venues

Allen D. Hunter
Department of Chemistry, Youngstown State University, Youngstown, OH 44555-3663
J. Chem. Educ., 1998, 75 (10), p 1297
DOI: 10.1021/ed075p1297
Publication Date (Web): October 1, 1998

Abstract

Single crystal diffraction analysis is a technique being increasingly utilized by non-specialists. To give students an introductory experience in this method, a one to two hour lecture and a three hour lab are described for use in courses such as organic analysis, biophysical chemistry, and instrumental methods. This class emphasizes the practical aspects of diffraction analysis, especially how routine structures are solved, how the results are prepared for publication as graphics and tables, and how reliable these results are. The student employ x-ray diffraction analysis software (i.e. SHELXTL) to solve the structures of compounds from supplied crystallographic data sets. Three data sets appropriate for this experiment are provided (i.e. for PhCH2-NH-CHPh-P(O)(OH)(OEt), (η6-1,4-C6H4(NH2)(NMe2))Cr(CO)3, and Pd(Ph2PCH2CH2PPh2)(S2C2(CN)2)) as is a link to a Youngstown State University Structure Center WEB page (i.e. http://www.as.ysu.edu/~adhunter/YSUSC/XRAYDPST/index.html) where additional properly formatted crystallographic data files may be downloaded.

Keywords (Domain):

Laboratory Instruction

Keywords (Pedagogy):

Hands-On Learning / Manipulatives

Keywords (Subject):

Instrumental Methods

Citing Articles

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This article has been cited by 4 ACS Journal articles (4 most recent appear below).

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    Designing, Teaching, and Evaluating a Unit on Symmetry and Crystallography in the High School Classroom

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    • Designing, Teaching, and Evaluating a Unit on Symmetry and Crystallography in the High School Classroom

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      An innovative teaching and research partnership was developed in collaboration with public high school chemistry teachers from the Talawanda (Ohio) School District and faculty, staff, and students from Miami University. With the involvement of high school ...

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    The Incorporation of Single Crystal X-ray Diffraction into the Undergraduate Chemistry Curriculum Using Internet-Facilitated Remote Diffractometer Control

    P. S. Szalay , M. Zeller and A. D. Hunter
    Journal of Chemical Education2005 82 (10), 1555
    • The Incorporation of Single Crystal X-ray Diffraction into the Undergraduate Chemistry Curriculum Using Internet-Facilitated Remote Diffractometer Control

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      Journal of Chemical Education2005 82 (10), 1555

      A laboratory experiment on single crystal X-ray diffraction has been developed and implemented in an inorganic chemistry course for undergraduate students via Internet-facilitated remote diffractometer control. The experiment was carried out from a remote ...

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    Crystallographic Study of Manganese(III) Acetylacetonate: An Advanced Undergraduate Project with Unexpected Challenges

    Silvano Geremia and Nicola Demitri
    Journal of Chemical Education2005 82 (3), 460
    • Crystallographic Study of Manganese(III) Acetylacetonate: An Advanced Undergraduate Project with Unexpected Challenges

      Silvano Geremia and Nicola Demitri
      Journal of Chemical Education2005 82 (3), 460

      An advanced undergraduate crystallographic experiment is proposed that integrates the well-tested protocol for synthesis of manganese acetylacetonate, Mn(acac)3, with a new low-temperature characterization of the crystal structure of the synthesized ...

  • Cover Image

    Integrating Single Crystal X-Ray Diffraction in the Undergraduate Curriculum

    Patrick E. Hoggard
    Journal of Chemical Education2002 79 (4), 420
    • Integrating Single Crystal X-Ray Diffraction in the Undergraduate Curriculum

      Patrick E. Hoggard
      Journal of Chemical Education2002 79 (4), 420

      Aspects of single crystal X-ray crystallography have been introduced into all four years of the chemistry curriculum at Santa Clara University. The laboratory components consist of (a) the determination of a molecular structure from a data set in year one,...

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  • Received: August 03, 2009

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