Article
RasMol and Mage in the Undergraduate Biochemistry Curriculum
Purchase the full-text
- PDF/HTML,
figures/images,
references and tables,
(where available)
Abstract
Mage and RasMol, free visualization software used to view and manipulate three-dimensional images of proteins and nucleic acids, have been incorporated extensively in the undergraduate biochemistry courses at several institutions in the University System of Georgia. Some teaching and learning activities using RasMol and Mage, and new educational resources, including the GLACTONE Web site and a CD-ROM, are described. The results of a survey of students enrolled in undergraduate biochemistry courses at five institutions in the University System of Georgia indicate that an overwhelming majority of students felt strongly that using Mage and RasMol increased their understanding of biochemistry. The survey also indicates that the majority of students used RasMol or Mage outside of the classroom either on campus or at home. The majority of the students surveyed recommend that RasMol or Mage be used in freshman chemistry and high school. We have trained high school teachers and faculty at two-year colleges throughout Georgia to use RasMol and have demonstrated its possible applications in lower-level chemistry and biology courses.
Keywords (Audience):
Second-Year UndergraduateKeywords (Domain):
BiochemistryKeywords (Feature):
Teaching with TechnologyKeywords (Pedagogy):
Computer-Based LearningKeywords (Subject):
Molecular ModelingCiting Articles
Citation data is made available by participants in CrossRef's Cited-by Linking service. For a more comprehensive list of citations to this article, users are encouraged to perform a search in SciFinder.
This article has been cited by 4 ACS Journal articles (4 most recent appear below).

Analyzing the 3D Structure of Human Carbonic Anhydrase II and Its Mutants Using Deep View and the Protein Data Bank
Noam J. Ship and Deborah B. ZambleJournal of Chemical Education2005 82 (12), 1805Analyzing the 3D Structure of Human Carbonic Anhydrase II and Its Mutants Using Deep View and the Protein Data Bank
Noam J. Ship and Deborah B. ZambleJournal of Chemical Education2005 82 (12), 1805A lab was designed to teach biological chemistry students to critically analyze the 3D structure of a protein. The enzyme studied was human carbonic anhydrase (II) and students also examined mutants and protein bound to a variety of ligands, metals, and ...

Assessment of Molecular Construction in Undergraduate Biochemistry
David C. Richardson and Jane S. Richardson , Rudy Sirochman , Steven W. Weiner , Mary Farwell and Cindy Putnam-Evans , Deborah Booth and Robert C. Bateman Jr.Journal of Chemical Education2005 82 (12), 1854Assessment of Molecular Construction in Undergraduate Biochemistry
David C. Richardson and Jane S. Richardson , Rudy Sirochman , Steven W. Weiner , Mary Farwell and Cindy Putnam-Evans , Deborah Booth and Robert C. Bateman Jr.Journal of Chemical Education2005 82 (12), 1854Undergraduate students in nine classes at eastern and southeastern universities in the U.S. were evaluated regarding their attitudes towards the use of molecular visualization in biochemistry lecture courses. All classes used the same visualization ...

Mage: A Tool for Developing Interactive Instructional Graphics
Stephen F. PavkovicJournal of Chemical Education2005 82 (1), 167Mage: A Tool for Developing Interactive Instructional Graphics
Stephen F. PavkovicJournal of Chemical Education2005 82 (1), 167Mage is a graphics program developed for visualization of three-dimensional structures of proteins and other macromolecules. An application of the Mage program is reported here for developing interactive instructional graphics files (kinemages) of much ...

Structural Studies of Phycobiliproteins from Spirulina: Combining Spectroscopy, Thermodynamics, and Molecular Modeling in an Undergraduate Biochemistry Experiment
Ann T. S. Taylor and Scott E. FellerJournal of Chemical Education2002 79 (12), 1467Structural Studies of Phycobiliproteins from Spirulina: Combining Spectroscopy, Thermodynamics, and Molecular Modeling in an Undergraduate Biochemistry Experiment
Ann T. S. Taylor and Scott E. FellerJournal of Chemical Education2002 79 (12), 1467Molecular modeling provides a powerful mechanism for students to connect molecular-level structural changes with macroscopically observable properties. We describe an experiment that integrates spectroscopy, thermodynamics, and molecular modeling into a ...
Tools
-
Add to Favorites
-
Download Citation
-
Email a Colleague -
Permalink
Order Reprints
Rights & Permissions
Citation Alerts
History
- Received: August 03, 2009
Cart

ACS
Network






