Evaluation of Parameters Critical to Observing Proteins Inside Living Escherichia coli by In-Cell NMR Spectroscopy

Zach Serber, Richard Ledwidge, Susan M. Miller, and Volker Dötsch*§
Contribution from the Graduate Group in Biophysics, Department of Pharmaceutical Chemistry, Department of Cellular and Molecular Pharmacology, University of California San Francisco, San Francisco, California 94143
J. Am. Chem. Soc., 2001, 123 (37), pp 8895–8901
DOI: 10.1021/ja0112846
Publication Date (Web): August 16, 2001
Copyright © 2001 American Chemical Society

 Graduate Group in Biophysics.

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 Department of Pharmaceutical Chemistry.

,
*

 To whom correspondence should be addressed. Telephone:  (415) 502-7050. Fax:  (415) 476-0688. E-Mail:  volker@picasso.ucsf.edu.

,
§

 Department of Cellular and Molecular Pharmacology.

Abstract

Our recently developed in-cell NMR procedure now enables one to observe protein conformations inside living cells. Optimization of the technique demonstrates that distinguishing the signals produced by a single protein species depends critically on protein overexpression levels and the correlation time in the cytoplasm. Less relevant is the selective incorporation of 15N. Poorly expressed proteins, insoluble proteins, and proteins that cannot tumble freely due to associations within the cell cannot yet be observed. We show in-cell NMR spectra of bacterial NmerA and human calmodulin and discuss limitations of the technique as well as prospects for future applications.

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History

  • Published In Issue September 19, 2001
  • Received May 25, 2001
    Revised Manuscript Received July 6, 2001

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