Do Ligand Binding and Solvent Exclusion Alter the Electrostatic Character within the Oxyanion Hole of an Enzymatic Active Site?

Paul A. Sigala, Aaron T. Fafarman, Patrick E. Bogard, Steven G. Boxer,* and Daniel Herschlag*;
Departments of Chemistry and Biochemistry, Stanford University, Stanford, California 94305-5307
J. Am. Chem. Soc., 2007, 129 (40), pp 12104–12105
DOI: 10.1021/ja075605a
Publication Date (Web): September 14, 2007
Copyright © 2007 American Chemical Society

Abstract

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We report the site-specific incorporation of a thiocyanate vibrational probe into the active-site oxyanion hole of ketosteroid isomerase (KSI) to test the effect of hydrophobic steroid binding and solvent exclusion on the local electrostatic environment at this position. While binding of an uncharged ground state steroid analogue shifts the observed −CN vibrational frequency by +0.4 cm-1 relative to unliganded KSI, binding of an intermediate steroid analogue containing localized negative charge results in a +2.8 cm-1 shift. On the basis of a Stark tuning rate of 0.7 cm-1/(MV/cm), this shift indicates a fivefold larger change in the projection of the local electric field along the −CN bond in the presence of the charged ligand. Binding of a single ring phenolate with oxyanion charge localization equivalent to the intermediate steroid analogue but lacking distal hydrocarbon rings results in an identical −CN peak shift. We conclude that solvent exclusion and replacement by hydrophobic steroid rings negligibly alter the electrostatic environment within the KSI oxyanion hole. Development of localized negative charge analogous to that of the dienolate intermediate during steroid isomerization dramatically increases the magnitude of the local electric field. This increase reflects field contributions from the localized negative charge itself as well as possible increased ordering of active-site dipoles in response to charge localization.

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History

  • Published In Issue October 10, 2007
  • Received July 26, 2007

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