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Contribution of Microorganisms with the Clade II Nitrous Oxide Reductase to Suppression of Surface Emissions of Nitrous Oxide
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    Contribution of Microorganisms with the Clade II Nitrous Oxide Reductase to Suppression of Surface Emissions of Nitrous Oxide
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    • Kristopher A. Hunt*
      Kristopher A. Hunt
      Department of Civil and Environmental Engineering, University of Washington, Seattle, Washington 98195, United States
      *Email: [email protected]. Phone: (206) 616-6985.
    • Alex V. Carr
      Alex V. Carr
      Department of Molecular Engineering Sciences, University of Washington, Seattle, Washington 98105, United States
      Institute for Systems Biology, Seattle, Washington 98109, United States
      More by Alex V. Carr
    • Anne E. Otwell
      Anne E. Otwell
      Department of Civil and Environmental Engineering, University of Washington, Seattle, Washington 98195, United States
    • Jacob J. Valenzuela
      Jacob J. Valenzuela
      Institute for Systems Biology, Seattle, Washington 98109, United States
    • Kathleen S. Walker
      Kathleen S. Walker
      Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
      Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee 37996, United States
    • Emma R. Dixon
      Emma R. Dixon
      Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
      Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee 37996, United States
    • Lauren M. Lui
      Lauren M. Lui
      Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
    • Torben N. Nielsen
      Torben N. Nielsen
      Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
    • Samuel Bowman
      Samuel Bowman
      Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02540, United States
    • Frederick von Netzer
      Frederick von Netzer
      Department of Civil and Environmental Engineering, University of Washington, Seattle, Washington 98195, United States
    • Ji-Won Moon
      Ji-Won Moon
      Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
      More by Ji-Won Moon
    • Christopher W. Schadt
      Christopher W. Schadt
      Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
    • Miguel Rodriguez Jr
      Miguel Rodriguez Jr
      Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
    • Kenneth Lowe
      Kenneth Lowe
      Environmental Sciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
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    • Dominique Joyner
      Dominique Joyner
      Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
      Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee 37996, United States
    • Katherine J. Davis
      Katherine J. Davis
      Center for Biofilm Engineering, Montana State University, Bozeman, Montana 59717, United States
    • Xiaoqin Wu
      Xiaoqin Wu
      Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
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    • Romy Chakraborty
      Romy Chakraborty
      Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
    • Matthew W. Fields
      Matthew W. Fields
      Center for Biofilm Engineering, Montana State University, Bozeman, Montana 59717, United States
      Department of Microbiology and Cell Biology, Montana State University, Bozeman, Montana 59717, United States
    • Jizhong Zhou
      Jizhong Zhou
      Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
      Institute for Environmental Genomics and Department of Botany and Microbiology, University of Oklahoma, Norman, Oklahoma 73019, United States
      State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
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    • Terry C. Hazen
      Terry C. Hazen
      Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37830, United States
      Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee 37996, United States
    • Adam P. Arkin
      Adam P. Arkin
      Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
      Department of Bioengineering, University of California Berkeley, Berkeley, California 94720, United States
    • Scott D. Wankel
      Scott D. Wankel
      Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02540, United States
    • Nitin S. Baliga
      Nitin S. Baliga
      Department of Molecular Engineering Sciences, University of Washington, Seattle, Washington 98105, United States
      Institute for Systems Biology, Seattle, Washington 98109, United States
    • David A. Stahl
      David A. Stahl
      Department of Civil and Environmental Engineering, University of Washington, Seattle, Washington 98195, United States
    Other Access OptionsSupporting Information (1)

    Environmental Science & Technology

    Cite this: Environ. Sci. Technol. 2024, 58, 16, 7056–7065
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    https://doi.org/10.1021/acs.est.3c07972
    Published April 12, 2024
    Copyright © 2024 American Chemical Society

    Abstract

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    The sources and sinks of nitrous oxide, as control emissions to the atmosphere, are generally poorly constrained for most environmental systems. Initial depth-resolved analysis of nitrous oxide flux from observation wells and the proximal surface within a nitrate contaminated aquifer system revealed high subsurface production but little escape from the surface. To better understand the environmental controls of production and emission at this site, we used a combination of isotopic, geochemical, and molecular analyses to show that chemodenitrification and bacterial denitrification are major sources of nitrous oxide in this subsurface, where low DO, low pH, and high nitrate are correlated with significant nitrous oxide production. Depth-resolved metagenomes showed that consumption of nitrous oxide near the surface was correlated with an enrichment of Clade II nitrous oxide reducers, consistent with a growing appreciation of their importance in controlling release of nitrous oxide to the atmosphere. Our work also provides evidence for the reduction of nitrous oxide at a pH of 4, well below the generally accepted limit of pH 5.

    Copyright © 2024 American Chemical Society

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    Supporting Information

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    The Supporting Information is available free of charge at https://pubs.acs.org/doi/10.1021/acs.est.3c07972.

    • Additional data and figures about instrumentation, well characteristics, metagenome statistics, normalizations, and dynamics of other wells in the area are provided (PDF)

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    Environmental Science & Technology

    Cite this: Environ. Sci. Technol. 2024, 58, 16, 7056–7065
    Click to copy citationCitation copied!
    https://doi.org/10.1021/acs.est.3c07972
    Published April 12, 2024
    Copyright © 2024 American Chemical Society

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