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Role of Amino Acid Residues for Dioxygen Activation in the Second Coordination Sphere of the Dicopper Site of pMMO

Cite this: Inorg. Chem. 2019, 58, 18, 12280–12288
Publication Date (Web):August 29, 2019
https://doi.org/10.1021/acs.inorgchem.9b01752
Copyright © 2019 American Chemical Society
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Abstract

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Formation of an active oxygen species at the dicopper site of pMMO is studied by using density functional theory (DFT) calculations. The role of the amino acid residues of tyrosine (Tyr374) and glutamate (Glu35) located in the second coordination sphere of the dicopper site is discussed in detail. The phenolic proton of the tyrosine residue is transferred to the Cu2O2 core in a two-step manner via the glutamate residue, and an electron is directly transferred to the Cu2O2 core. These proton- and electron-transfer processes induce the O–O bond cleavage of the μ–η22-peroxodicopper(II) species to form the (μ-oxo)(μ-hydroxo)CuIICuIII species, which is able to play a key role of methane hydroxylation at the dicopper site of pMMO ( Inorg. Chem. 2013, 52, 7907). This proton-coupled electron-transfer mechanism is a little different from that in tyrosinase in that the proton of substrate tyrosine is directly transferred to the dicopper site ( J. Am. Chem. Soc. 2006, 128, 9873) because there is no proton acceptor in the vicinity of the dicopper site of tyrosinase. The rate-determining step for the formation of the (μ-oxo)(μ-hydroxo)CuIICuIII species is determined to be the O–O bond cleavage. These results shed new light on the interpretation of the role of the tyrosine and glutamate residues located in the second coordination sphere of the dicopper site of pMMO.

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The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/acs.inorgchem.9b01752.

  • Additional figures (energy diagrams and plots of spin densities and ESP charges) and Cartesian coordinate (PDF)

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Cited By


This article is cited by 4 publications.

  1. Kazunari Yoshizawa, Mayuko Miyanishi. Orbital Concept for Methane Activation. 2020,,, 1-22. https://doi.org/10.1007/978-981-15-6986-9_1
  2. . Direct Hydroxylation of Methane. 2020,,https://doi.org/10.1007/978-981-15-6986-9
  3. Yoshihito Shiota, Kazunari Yoshizawa. Theoretical Study of the Direct Conversion of Methane by First-Row Transition-Metal Oxide Cations in the Gas Phase. 2020,,, 23-44. https://doi.org/10.1007/978-981-15-6986-9_2
  4. . Direct Hydroxylation of Methane. 2020,,https://doi.org/10.1007/978-981-15-6986-9

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