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Rationalizing the Unexpected Sensitivity in Excited State Lifetimes of Adenine to Tautomerization by Nonadiabatic Molecular Dynamics
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    Rationalizing the Unexpected Sensitivity in Excited State Lifetimes of Adenine to Tautomerization by Nonadiabatic Molecular Dynamics
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    The Journal of Physical Chemistry B

    Cite this: J. Phys. Chem. B 2022, 126, 37, 7077–7087
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    https://doi.org/10.1021/acs.jpcb.2c03178
    Published September 9, 2022
    Copyright © 2022 American Chemical Society

    Abstract

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    The remarkable photostability of canonical nucleobases makes them ideal building blocks for DNA and RNA. Even minor structural changes are expected to lead to drastic alteration of their subpicosecond excited state lifetimes. However, it is interesting to note that while the 9H- and 7H-amino tautomers of adenine possess drastically different lifetimes, 9H- and 7H-keto guanine possess similar excited state lifetimes. With an aim to explain this unexpected difference in sensitivity of lifetimes to tautomerization, we have investigated the excited state relaxation mechanism of UV-excited adenine and guanine tautomers using surface hopping based nonadiabatic molecular dynamics. We find that internal conversion in both guanine tautomers is almost barrierless while both adenine tautomers encounter significant barriers before they can deactivate. Moreover, the major deactivation channel (C2-puckering) in 9H-amino adenine is overall more efficient than the one (C6-puckering) in the 7H-amino form. We trace this difference to the frequent rotation of the amino group which disrupts its conjugation with the heterocyclic ring thereby reducing the strength of nonadiabatic coupling and, hence, delaying internal conversion.

    Copyright © 2022 American Chemical Society

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    Supporting Information

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    The Supporting Information is available free of charge at https://pubs.acs.org/doi/10.1021/acs.jpcb.2c03178.

    • Tables for comparison of vertical excitation energies at different level of theory, plots for KS-orbitals involved in lowest-lying singlet excited state for all purine tautomers, plots for critical structures of all tautomers, LIIC paths C6-puckered CI channels for 9HA and 7HA, and KDE plots for structural parameters for all tautomers (PDF)

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    This article is cited by 3 publications.

    1. Mohammad Salehi, Pierre Çarçabal, Reza Omidyan. Theoretical Insights on the Excited State Deactivation Mechanism in Protonated Adenosine. The Journal of Physical Chemistry A 2024, 128 (50) , 10851-10860. https://doi.org/10.1021/acs.jpca.4c06496
    2. Simin Roshan, Michael Hymas, Vasilios G. Stavros, Reza Omidyan. New theoretical insights on the nonradiative relaxation mechanism of the core structure of mycosporines: The amino-cyclohexenone central template. The Journal of Chemical Physics 2024, 161 (9) https://doi.org/10.1063/5.0222147
    3. Masafumi Koga, Do Hyung Kang, Zachary N. Heim, Philipp Meyer, Blake A. Erickson, Neal Haldar, Negar Baradaran, Martina Havenith, Daniel M. Neumark. Extreme ultraviolet time-resolved photoelectron spectroscopy of adenine, adenosine and adenosine monophosphate in a liquid flat jet. Physical Chemistry Chemical Physics 2024, 26 (17) , 13106-13117. https://doi.org/10.1039/D4CP00856A

    The Journal of Physical Chemistry B

    Cite this: J. Phys. Chem. B 2022, 126, 37, 7077–7087
    Click to copy citationCitation copied!
    https://doi.org/10.1021/acs.jpcb.2c03178
    Published September 9, 2022
    Copyright © 2022 American Chemical Society

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