Rotational Dynamics of Water near Osmolytes by Molecular Dynamics SimulationsClick to copy article linkArticle link copied!
- Yuji Higuchi*Yuji Higuchi*Email: [email protected]Research Institute for Information Technology, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, JapanMore by Yuji Higuchi
- Md. Abu SalehMd. Abu SalehDepartment of Applied Chemistry, Graduate School of Engineering, Kyushu University, Fukuoka 819-0395, JapanMore by Md. Abu Saleh
- Takahisa AnadaTakahisa AnadaDepartment of Applied Chemistry, Graduate School of Engineering, Kyushu University, Fukuoka 819-0395, JapanInstitute for Materials Chemistry and Engineering, Kyushu University, Fukuoka 819-0395, JapanMore by Takahisa Anada
- Masaru TanakaMasaru TanakaDepartment of Applied Chemistry, Graduate School of Engineering, Kyushu University, Fukuoka 819-0395, JapanInstitute for Materials Chemistry and Engineering, Kyushu University, Fukuoka 819-0395, JapanMore by Masaru Tanaka
- Mafumi Hishida*Mafumi Hishida*Email: [email protected]Department of Chemistry, Faculty of Science, Tokyo University of Science, 1-3 Kagurazaka, Shinjuku, Tokyo 162-8601, JapanMore by Mafumi Hishida
Abstract

The behavior of water molecules around organic molecules has attracted considerable attention as a crucial factor influencing the properties and functions of soft matter and biomolecules. Recently, it has been suggested that the change in protein stability upon the addition of small organic molecules (osmolytes) is dominated by the change in the water dynamics caused by the osmolyte, where the dynamics of not only the directly interacting water molecules but also the long-range hydration layer affect the protein stability. However, the relation between the long-range structure of hydration water in various solutions and the water dynamics remains unclear at the molecular level. We performed density-functional tight-binding molecular dynamics simulations to elucidate the varying rotational dynamics of water molecules in 15 osmolyte solutions. A positive correlation was observed between the rotational relaxation time and our proposed normalized parameter obtained by dividing the number of hydrogen bonds between water molecules by the number of nearest-neighbor water molecules. For the 15 osmolyte solutions, an increase or a decrease in the value of the normalized parameter for the second hydration shell tended to result in water molecules with slow and fast rotational dynamics, respectively, thus illustrating the importance of the second hydration shell for the rotational dynamics of water molecules. Our simulation results are anticipated to advance the current understanding of water dynamics around organic molecules and the long-range structure of water molecules.
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This article is cited by 4 publications.
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