Pulsed Interleaved MINFLUX
- Luciano A. MasulloLuciano A. MasulloCentro de Investigaciones en Bionanociencias (CIBION), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Godoy Cruz 2390, C1425FQD, Ciudad Autónoma de Buenos Aires, ArgentinaDepartamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Güiraldes 2620, C1428EHA, Ciudad Autónoma de Buenos Aires, ArgentinaMore by Luciano A. Masullo
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- Florian SteinerFlorian SteinerDepartment of Chemistry and Center for NanoScience, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13 Haus E, 81377 München, GermanyMore by Florian Steiner
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- Jonas ZähringerJonas ZähringerDepartment of Chemistry and Center for NanoScience, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13 Haus E, 81377 München, GermanyMore by Jonas Zähringer
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- Lucía F. LopezLucía F. LopezCentro de Investigaciones en Bionanociencias (CIBION), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Godoy Cruz 2390, C1425FQD, Ciudad Autónoma de Buenos Aires, ArgentinaMore by Lucía F. Lopez
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- Johann BohlenJohann BohlenDepartment of Chemistry and Center for NanoScience, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13 Haus E, 81377 München, GermanyMore by Johann Bohlen
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- Lars RichterLars RichterCentro de Investigaciones en Bionanociencias (CIBION), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Godoy Cruz 2390, C1425FQD, Ciudad Autónoma de Buenos Aires, ArgentinaDepartment of Chemistry and Center for NanoScience, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13 Haus E, 81377 München, GermanyMore by Lars Richter
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- Fiona ColeFiona ColeDepartment of Chemistry and Center for NanoScience, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13 Haus E, 81377 München, GermanyMore by Fiona Cole
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- Philip Tinnefeld*Philip Tinnefeld*E-mail: [email protected]Department of Chemistry and Center for NanoScience, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13 Haus E, 81377 München, GermanyMore by Philip Tinnefeld
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- Fernando D. Stefani*Fernando D. Stefani*E-mail: [email protected]Centro de Investigaciones en Bionanociencias (CIBION), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Godoy Cruz 2390, C1425FQD, Ciudad Autónoma de Buenos Aires, ArgentinaDepartamento de Física, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Güiraldes 2620, C1428EHA, Ciudad Autónoma de Buenos Aires, ArgentinaMore by Fernando D. Stefani
Abstract

We introduce p-MINFLUX, a new implementation of the highly photon-efficient single-molecule localization method with a simplified experimental setup and additional fluorescence lifetime information. In contrast to the original MINFLUX implementation, p-MINFLUX uses interleaved laser pulses to deliver the doughnut-shaped excitation foci at a maximum repetition rate. Using both static and dynamic DNA origami model systems, we demonstrate the performance of p-MINFLUX for single-molecule localization nanoscopy and tracking, respectively. p-MINFLUX delivers 1–2 nm localization precision with 2000–1000 photon counts. In addition, p-MINFLUX gives access to the fluorescence lifetime enabling multiplexing and super-resolved lifetime imaging. p-MINFLUX should help to unlock the full potential of innovative single-molecule localization schemes.
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- Alexey N. Butkevich. Modular Synthetic Approach to Silicon-Rhodamine Homologues and Analogues via Bis-aryllanthanum Reagents. Organic Letters 2021, 23 (7) , 2604-2609. https://doi.org/10.1021/acs.orglett.1c00512
- Alan M. Szalai, Bruno Siarry, Jerónimo Lukin, Sebastián Giusti, Nicolás Unsain, Alfredo Cáceres, Florian Steiner, Philip Tinnefeld, Damián Refojo, Thomas M. Jovin, Fernando D. Stefani. Super-resolution Imaging of Energy Transfer by Intensity-Based STED-FRET. Nano Letters 2021, 21 (5) , 2296-2303. https://doi.org/10.1021/acs.nanolett.1c00158
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- Elias Amselem, Bo Broadwater, Tora Hävermark, Magnus Johansson, Johan Elf. Real-time single-molecule 3D tracking in E. coli based on cross-entropy minimization. Nature Communications 2023, 14 (1) https://doi.org/10.1038/s41467-023-36879-1
- Yucheng Sun, Zengnan Wu, Yuting Shang, Seong Ho Kang, Jin-Ming Lin. Single-molecule detection-based super-resolution imaging in single-cell analysis: Inspiring progress and future prospects. TrAC Trends in Analytical Chemistry 2023, 167 , 117255. https://doi.org/10.1016/j.trac.2023.117255
- Lars Richter, Alan M. Szalai, C. Lorena Manzanares‐Palenzuela, Izabela Kamińska, Philip Tinnefeld. Exploring the Synergies of Single‐Molecule Fluorescence and 2D Materials Coupled by DNA. Advanced Materials 2023, 306 https://doi.org/10.1002/adma.202303152
- Joshua Robert Prindle, Olivia Isabella Christiane de Cuba, Andreas Gahlmann. Single-molecule tracking to determine the abundances and stoichiometries of freely-diffusing protein complexes in living cells: Past applications and future prospects. The Journal of Chemical Physics 2023, 159 (7) https://doi.org/10.1063/5.0155638
- Megan K Dunlap, Duncan P Ryan, Peter M Goodwin, Chris J Sheehan, James H Werner, Somak Majumder, Jennifer A Hollingsworth, Martin P Gelfand, Alan Van Orden. Nanoscale imaging of quantum dot dimers using time-resolved super-resolution microscopy combined with scanning electron microscopy. Nanotechnology 2023, 34 (27) , 275202. https://doi.org/10.1088/1361-6528/acc9c9
- Fernando D. Stefani. Tracking nanoscopic motion with minima of light. Nature Photonics 2023, 17 (7) , 552-553. https://doi.org/10.1038/s41566-023-01239-4
- Cecilia Zaza, Germán Chiarelli, Ludovit P. Zweifel, Mauricio Pilo‐Pais, Evangelos Sisamakis, Fabio Barachati, Fernando D. Stefani, Guillermo P. Acuna. Super‐Resolved FRET Imaging by Confocal Fluorescence‐Lifetime Single‐Molecule Localization Microscopy. Small Methods 2023, 7 (7) https://doi.org/10.1002/smtd.202201565
- Nicholas A. Vickers, Fatemeh Sharifi, Sean B. Andersson. Information optimization of laser scanning microscopes for real-time feedback-driven single particle tracking. Optics Express 2023, 31 (13) , 21434. https://doi.org/10.1364/OE.485357
- Trung Duc Nguyen, Yuan-I Chen, Limin H. Chen, Hsin-Chih Yeh. Recent Advances in Single-Molecule Tracking and Imaging Techniques. Annual Review of Analytical Chemistry 2023, 16 (1) , 253-284. https://doi.org/10.1146/annurev-anchem-091922-073057
- Lucía F. Lopez, Luciano A. Masullo, Alan M. Szalai, Florencia Edorna, Florencia D. Choque, Fernando Caprile, Fernando D. Stefani. Optimization and characterization of toroidal foci for super-resolution fluorescence microscopy: tutorial. Journal of the Optical Society of America B 2023, 40 (4) , C103. https://doi.org/10.1364/JOSAB.482413
- Eli Slenders, Giuseppe Vicidomini. ISM-FLUX: MINFLUX with an array detector. Physical Review Research 2023, 5 (2) https://doi.org/10.1103/PhysRevResearch.5.023033
- Frank Mieskes, Evelyn Ploetz, Fabian Wehnekamp, Virgile Rat, Don C. Lamb. Multicolor 3D Orbital Tracking. Small 2023, 19 (17) https://doi.org/10.1002/smll.202204726
- Megan K. Dunlap, Liam A. Koch, Duncan P. Ryan, Peter M. Goodwin, James H. Werner, Paul B. Bourdin, Jennifer A. Hollingsworth, Chris J. Sheehan, Martin P. Gelfand, Alan K. Van Orden, , , . Time-resolved super-resolution microscopy to image photoluminescence lifetimes and spatially resolve dual emitter semiconductor nanostructures. 2023, 25. https://doi.org/10.1117/12.2650337
- Silvia Galiani, Christian Eggeling, Katharina Reglinski. Super-resolution microscopy and studies of peroxisomes. Biological Chemistry 2023, 404 (2-3) , 87-106. https://doi.org/10.1515/hsz-2022-0314
- Tim Schröder, Johann Bohlen, Sarah E. Ochmann, Patrick Schüler, Stefan Krause, Don C. Lamb, Philip Tinnefeld. Shrinking gate fluorescence correlation spectroscopy yields equilibrium constants and separates photophysics from structural dynamics. Proceedings of the National Academy of Sciences 2023, 120 (4) https://doi.org/10.1073/pnas.2211896120
- 卫奥尼 Wei Aoni, 秦成兵 Qin Chengbing, 董帅 Dong Shuai, 孟新钦 Meng Xinqin, 宋蕴睿 Song Yunrui, 李向东 Li Xiangdong, 梁喜龙 Liang Xilong, 张国峰 Zhang Guofeng, 陈瑞云 Chen Ruiyun, 胡建勇 Hu Jianyong, 杨志春 Yang Zhichun, 霍建忠 Huo Jianzhong, 肖连团 Xiao Liantuan, 贾锁堂 Jia Suotang. 超分辨荧光显微成像的若干研究进展. Laser & Optoelectronics Progress 2023, 60 (11) , 1106012. https://doi.org/10.3788/LOP230749
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- Kun Zhao, Xinzhu Xu, Wei Ren, Dayong Jin, Peng Xi. Two-photon MINFLUX with doubled localization precision. eLight 2022, 2 (1) https://doi.org/10.1186/s43593-021-00011-x
- Xinzhu Xu, Shu Jia, Peng Xi. Raster-scanning Donut simplifies MINFLUX and provides alternative implement on other scanning-based microscopes. Light: Science & Applications 2022, 11 (1) https://doi.org/10.1038/s41377-022-00983-6
- Luciano A. Masullo, Alan M. Szalai, Lucía F. Lopez, Mauricio Pilo-Pais, Guillermo P. Acuna, Fernando D. Stefani. An alternative to MINFLUX that enables nanometer resolution in a confocal microscope. Light: Science & Applications 2022, 11 (1) https://doi.org/10.1038/s41377-022-00896-4
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- Jing Wang, Zhen Zhang, Hongyu Shen, Qi Wu, Min Gu. Application and development of fluorescence probes in MINFLUX nanoscopy. Journal of Innovative Optical Health Sciences 2022, https://doi.org/10.1142/S1793545822300117
- Lynn M. Ostersehlt, Daniel C. Jans, Anna Wittek, Jan Keller-Findeisen, Kaushik Inamdar, Steffen J. Sahl, Stefan W. Hell, Stefan Jakobs. DNA-PAINT MINFLUX nanoscopy. Nature Methods 2022, 19 (9) , 1072-1075. https://doi.org/10.1038/s41592-022-01577-1
- Bertus van Heerden, Tjaart P. J. Krüger. Theoretical comparison of real-time feedback-driven single-particle tracking techniques. The Journal of Chemical Physics 2022, 157 (8) https://doi.org/10.1063/5.0096729
- Cecilia Zaza, Sabrina Simoncelli. Plasmonics for advance single-molecule fluorescence spectroscopy and imaging in biology. Frontiers in Photonics 2022, 3 https://doi.org/10.3389/fphot.2022.989570
- Dominic A. Helmerich, Gerti Beliu, Danush Taban, Mara Meub, Marcel Streit, Alexander Kuhlemann, Sören Doose, Markus Sauer. Photoswitching fingerprint analysis bypasses the 10-nm resolution barrier. Nature Methods 2022, 19 (8) , 986-994. https://doi.org/10.1038/s41592-022-01548-6
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- Bertus van Heerden, Nicholas A. Vickers, Tjaart P. J. Krüger, Sean B. Andersson. Real‐Time Feedback‐Driven Single‐Particle Tracking: A Survey and Perspective. Small 2022, 18 (29) https://doi.org/10.1002/smll.202107024
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- Fernando Caprile, Luciano A. Masullo, Fernando D. Stefani. PyFocus – A Python package for vectorial calculations of focused optical fields under realistic conditions. Application to toroidal foci. Computer Physics Communications 2022, 275 , 108315. https://doi.org/10.1016/j.cpc.2022.108315
- Laura A. Garrison, Ivan Kolesar, Ivan Viola, Helwig Hauser, Stefan Bruckner. Trends & Opportunities in Visualization for Physiology: A Multiscale Overview. Computer Graphics Forum 2022, 41 (3) , 609-643. https://doi.org/10.1111/cgf.14575
- Kirti Prakash. At the molecular resolution with MINFLUX?. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 2022, 380 (2220) https://doi.org/10.1098/rsta.2020.0145
- Yile Sun, Lu Yin, Mingxuan Cai, Hanmeng Wu, Xiang Hao, Cuifang Kuang, Xu Liu. Modulated illumination localization microscopy-enabled sub-10 nm resolution. Journal of Innovative Optical Health Sciences 2022, 15 (02) https://doi.org/10.1142/S179354582230004X
- Luciano A. Masullo, Lucía F. Lopez, Fernando D. Stefani. A common framework for single-molecule localization using sequential structured illumination. Biophysical Reports 2022, 2 (1) , 100036. https://doi.org/10.1016/j.bpr.2021.100036
- Xuan Zhou, Fan Shi, Jiafeng Lu, Mengjun Xu, Mengdie Hou, Mischa Bonn, Xiaomin Liu, Xianglong Zeng. Generating femtosecond visible doughnut beams based on transverse-mode modulation. Journal of Lightwave Technology 2022, 10 , 1-8. https://doi.org/10.1109/JLT.2022.3194582
- Luciano A. Masullo, Alan M. Szalai, Lucía F. Lopez, Fernando D. Stefani. Fluorescence nanoscopy at the sub-10 nm scale. Biophysical Reviews 2021, 13 (6) , 1101-1112. https://doi.org/10.1007/s12551-021-00864-z
- Alan M. Szalai, Cecilia Zaza, Fernando D. Stefani. Super-resolution FRET measurements. Nanoscale 2021, 13 (44) , 18421-18433. https://doi.org/10.1039/D1NR05769C
- Jessica Valli, Adrian Garcia-Burgos, Liam M. Rooney, Beatriz Vale de Melo e Oliveira, Rory R. Duncan, Colin Rickman. Seeing beyond the limit: A guide to choosing the right super-resolution microscopy technique. Journal of Biological Chemistry 2021, 297 (1) , 100791. https://doi.org/10.1016/j.jbc.2021.100791
- Izabela Kamińska, Johann Bohlen, Renukka Yaadav, Patrick Schüler, Mario Raab, Tim Schröder, Jonas Zähringer, Karolina Zielonka, Stefan Krause, Philip Tinnefeld. Graphene Energy Transfer for Single‐Molecule Biophysics, Biosensing, and Super‐Resolution Microscopy. Advanced Materials 2021, 33 (24) , 2101099. https://doi.org/10.1002/adma.202101099
- Chen Zhang, Kevin Welsher. Information-Efficient, Off-Center Sampling Results in Improved Precision in 3D Single-Particle Tracking Microscopy. Entropy 2021, 23 (5) , 498. https://doi.org/10.3390/e23050498
- Ruslan I. Dmitriev, Xavier Intes, Margarida M. Barroso. Luminescence lifetime imaging of three-dimensional biological objects. Journal of Cell Science 2021, 134 (9) , 1-17. https://doi.org/10.1242/jcs.254763