Caught while Dissolving: Revealing the Interfacial Solvation of the Mg2+ Ions on the MgO Surface
- Francesco Tavani*Francesco Tavani*E-mail: [email protected]Dipartimento di Chimica, Università di Roma “La Sapienza”, P.le A. Moro 5, 00185 Roma, ItalyMore by Francesco Tavani
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- Matteo BusatoMatteo BusatoDipartimento di Chimica, Università di Roma “La Sapienza”, P.le A. Moro 5, 00185 Roma, ItalyMore by Matteo Busato
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- Luca Braglia
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- Silvia MauriSilvia MauriCNR - Istituto Officina dei Materiali, TASC, I-34149 Trieste, ItalyDipartimento di Fisica, Università di Trieste, Via A. Valerio 2, 34127 Trieste, ItalyMore by Silvia Mauri
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- Piero TorelliPiero TorelliCNR - Istituto Officina dei Materiali, TASC, I-34149 Trieste, ItalyMore by Piero Torelli
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- Paola D’Angelo*Paola D’Angelo*E-mail: [email protected]Dipartimento di Chimica, Università di Roma “La Sapienza”, P.le A. Moro 5, 00185 Roma, ItalyMore by Paola D’Angelo
Abstract

Interfaces between water and materials are ubiquitous and are crucial in materials sciences and in biology, where investigating the interaction of water with the surface under ambient conditions is key to shedding light on the main processes occurring at the interface. Magnesium oxide is a popular model system to study the metal oxide–water interface, where, for sufficient water loadings, theoretical models have suggested that reconstructed surfaces involving hydrated Mg2+ metal ions may be energetically favored. In this work, by combining experimental and theoretical surface-selective ambient pressure X-ray absorption spectroscopy with multivariate curve resolution and molecular dynamics, we evidence in real time the occurrence of Mg2+ solvation at the interphase between MgO and solvating media such as water and methanol (MeOH). Further, we show that the Mg2+ surface ions undergo a reversible solvation process, we prove the dissolution/redeposition of the Mg2+ ions belonging to the MgO surface, and we demonstrate the formation of octahedral [Mg(H2O)6]2+ and [Mg(MeOH)6]2+ intermediate solvated species. The unique surface, electronic, and structural sensitivity of the developed technique may be beneficial to access often elusive properties of low-Z metal ion intermediates involved in interfacial processes of chemical and biological interest.
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1. Introduction
2. Experimental Methods
3. Results and Discussion
1. | Initially, a clean MgO sample (pretreated in He at 250 °C to eliminate superficial impurities) was exposed to water vapor for 95 min using He as a carrier gas at a working temperature of 50 °C. | ||||
2. | In the second step, the water flux was interrupted and the temperature was increased up to 250 °C with a 3.3 °C per minute rate while exposing the sample to He. | ||||
3. | To investigate the superficial interaction of MgO with an organic solvent, the same sample was then exposed to methanol vapor (with He acting as a carrier gas) at a temperature of 50 °C for 85 min. | ||||
4. | Finally, the methanol flux was interrupted and the temperature of the system was increased up to 250 °C with a 6.6 °C per minute rate while exposing the sample to an inert atmosphere. |
Figure 1

Figure 1. Evolution of the operando Mg K-edge AP-NEXAFS spectra upon MgO exposure to water (a) and methanol (b). Constant energy cuts are drawn at 1305.7 eV (yellow dotted lines) and at 1310.2 eV (gray dotted lines). The spectral scans recorded during the flux of water and methanol at 50 °C and during the subsequent flux interruption and temperature increase up to 250 °C are highlighted using green and purple backgrounds, respectively. In both panels, the AP-NEXAFS spectra recorded before the surface exposure to the given flux and at the temperature of 250 °C after flux interruption are evidenced in bold black lines.
Figure 2

Figure 2. (a) Intensity variation at 1305.7 eV (full yellow line) and at 1310.2 eV (full gray line) of the operando Mg K-edge XAS spectra measured upon MgO exposure to water vapor. The intensities of the starting XAS spectrum, of the XAS spectra recorded during the water flux at 50 °C, and of those measured during the water flux interruption and contemporary temperature increase are highlighted by black, green, and purple backgrounds, respectively. (b, c) Results of the decomposition of the Mg K-edge spectra. Extracted concentration profiles and Mg K-edge NEXAFS spectra (panels b and c, respectively). (d) Comparison between the NEXAFS spectrum of the Mg2+ intermediate species arising upon exposure of the MgO surface to water and the theoretical average Mg K-edge NEXAFS spectrum resulting from 500 MD snapshots of the fully hydrated Mg2+ ion (full indigo line).
Figure 3

Figure 3. Theoretical NEXAFS spectra (gray full lines) calculated from 500 MD snapshots of the Mg2+ ion in water at 50 °C and converged NEXAFS average (blue full line) of the 500 spectra (a) along with a selection of average NEXAFS spectra calculated with a variable number (N) of spectra (b). The associated evolutions of the total absolute differences between averages of spectra computed with increasing N values are shown in the insets of panel b. SN and SN* are the averages of N and N* spectra, respectively, with N* immediately preceding the given value of N in the evaluated sequence (e.g., N* = 250 if N = 500).
Figure 4

Figure 4. (a) Intensity variation at 1305.7 eV (full yellow line) and at 1310.2 eV (full gray line) of the operando Mg K-edge XAS spectra measured upon MgO exposure to methanol vapor. The intensities of the starting XAS spectrum, of the XAS spectra recorded during the methanol flux at 50 °C, and of those measured during the methanol flux interruption and contemporary temperature increase are highlighted by black, green, and purple backgrounds, respectively. (b, c) Results of the decomposition of the Mg K-edge spectroscopic data. Extracted concentration and Mg K-edge NEXAFS spectral profiles (panels b and c, respectively). (d) Comparison between the MCR-extracted AP-NEXAFS spectral component of the Mg2+ intermediate species arising upon exposure of the MgO surface to methanol and the theoretical average Mg K-edge NEXAFS spectrum resulting from 500 MD snapshots of the Mg2+ ion fully solvated by methanol molecules (full indigo line).
Figure 5

Figure 5. Pictorial representation of the main findings presented in this work, where it is evidenced that at 50 °C, a temperature-favored reversible hydration/solvation of Mg2+ ions occurs at the MgO surface, upon its sequential exposure to water (left) and methanol (right).
4. Conclusions
Supporting Information
The Supporting Information is available free of charge at https://pubs.acs.org/doi/10.1021/acsami.2c10005.
Experimental details, data processing, MCR decomposition of the NEXAFS spectra, details on MD simulations and DFT calculations, 3D rendering of the employed reaction cell, theoretical NEXAFS calculations of DFT-optimized structures, MD Mg–O radial distribution functions of the Mg2+ ion in water and methanol, and convergence of the NEXAFS theoretical spectra calculated from MD snapshots of the Mg2+ ion in methanol (PDF)
Terms & Conditions
Most electronic Supporting Information files are available without a subscription to ACS Web Editions. Such files may be downloaded by article for research use (if there is a public use license linked to the relevant article, that license may permit other uses). Permission may be obtained from ACS for other uses through requests via the RightsLink permission system: http://pubs.acs.org/page/copyright/permissions.html.
Acknowledgments
The Italian Ministry of University and Research is acknowledged for financial support through the PRIN 2017 program (project 2017KKP5ZR, MOSCATo). This work was partially performed in the framework of the Nanoscience Foundry and Fine Analysis (NFFA-MIUR Italy Progetti Internazionali) facility. Part of the calculations were performed on the Marconi100 system of the CINECA supercomputing center (grant IsC81_DENADA).
References
This article references 58 other publications.
- 1Groß, A. Reactions at Surfaces studied by Ab Initio Dynamics Calculations. Surf. Sci. Rep. 1998, 32, 291– 340, DOI: 10.1016/S0167-5729(98)00008-9[Crossref], [CAS], Google Scholar1https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1cXnslOlt7s%253D&md5=4ccff3cf607d429f040a37d427fc1772Reactions at surfaces studied by ab initio dynamics calculationsGross, AxelSurface Science Reports (1998), 32 (8), 291-340CODEN: SSREDI; ISSN:0167-5729. (Elsevier Science B.V.)Owing to the development of efficient algorithms and the improvement of computer power it is now possible to map out potential energy surfaces (PESs) of reactions at surfaces in great detail. This achievement has been accompanied by an increased effort in the dynamical simulation of processes on surfaces. The paradigm for simple reactions at surfaces - the dissocn. of hydrogen on metal surfaces - can now be treated fully quantum dynamically in the mol. degrees of freedom from first principles, i.e., without invoking any adjustable parameters. This relatively new field of ab initio dynamics simulations of reactions at surfaces will be reviewed. Mainly the dissocn. of hydrogen on clean and adsorbate covered metal surfaces and on semiconductor surfaces will be discussed. In addn., the ab initio mol. dynamics treatment of reactions of hydrogen atoms with hydrogen-passivated semiconductor surfaces and recent achievements in the ab initio description of laser-induced desorption and further developments will be addressed.
- 2Brown, G. E.; Henrich, V. E.; Casey, W. H.; Clark, D. L.; Eggleston, C.; Felmy, A.; Goodman, D. W.; Grätzel, M.; Maciel, G.; McCarthy, M. I.; Nealson, K. H.; Sverjensky, D. A.; Toney, M. F.; Zachara, J. M. Metal Oxide Surfaces and Their Interactions with Aqueous Solutions and Microbial Organisms. Chem. Rev. 1999, 99, 77– 174, DOI: 10.1021/cr980011z[ACS Full Text
], [CAS], Google Scholar
2https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1cXotFaju78%253D&md5=ca7dd477811849283f4096ab04e025abMetal Oxide Surfaces and Their Interactions with Aqueous Solutions and Microbial OrganismsBrown, Gordon E., Jr.; Henrich, Victor E.; Casey, William H.; Clark, David L.; Eggleston, Carrick; Felmy, Andrew; Goodman, D. Wayne; Graetzel, Michael; Maciel, Gary; McCarthy, Maureen I.; Nealson, Kenneth H.; Sverjensky, Dimitri A.; Toney, Michael F.; Zachara, John M.Chemical Reviews (Washington, D. C.) (1999), 99 (1), 77-174CODEN: CHREAY; ISSN:0009-2665. (American Chemical Society)A review with 825 refs. concerning the state of knowledge of metal oxide surfaces and their interactions with aq. solns. and microorganisms highlighting scientific and technol. contexts where this knowledge is needed and evaluating exptl. and theor. techniques needed to obtain the necessary information is given. Topics discussed include: characterization of clean metal oxide surfaces; water vapor-metal oxide interactions; aq. soln.-metal oxide interfaces; dissoln. and growth of metal (hydr)oxides; biotic processes in metal oxide surface chem.; theory; and challenges and future directions. - 3Carrasco, E.; Brown, M. A.; Sterrer, M.; Freund, H.-J.; Kwapien, K.; Sierka, M.; Sauer, J. Thickness-Dependent Hydroxylation of MgO(001) Thin Films. J. Phys. Chem. C 2010, 114, 18207– 18214, DOI: 10.1021/jp105294e[ACS Full Text
], [CAS], Google Scholar
3https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC3cXht1CmtL7P&md5=0d1dc8c024d2ff8094da7e1e9df6aa70Thickness-Dependent Hydroxylation of MgO(001) Thin FilmsCarrasco, Esther; Brown, Matthew A.; Sterrer, Martin; Freund, Hans-Joachim; Kwapien, Karolina; Sierka, Marek; Sauer, JoachimJournal of Physical Chemistry C (2010), 114 (42), 18207-18214CODEN: JPCCCK; ISSN:1932-7447. (American Chemical Society)Hydroxylation of MgO surfaces has been studied from UHV to mbar pressure for MgO(001) films of different thickness grown on Ag(001) by XPS, IR reflection absorption spectroscopy, and d. functional theory calcns. In agreement with earlier studies on MgO(001) single crystals, a threshold water pressure on the order of 10-4 mbar is found for extensive hydroxylation of thick, bulklike MgO films. Decreasing the MgO film thickness shifts the threshold pressure to lower values, being 10-6 mbar in the limit of 2 monolayer MgO(001)/Ag(001). This result is explained on the basis of the precursor state of periclase MgO(001) dissoln. involving hydrolysis of Mg-O surface bonds. The enhanced structural flexibility (polaronic distortion) of the ultrathin MgO film facilitates surface hydroxylation by lowering the barrier for hydrolysis. - 4Verdaguer, A.; Sacha, G. M.; Bluhm, H.; Salmeron, M. Molecular Structure of Water at Interfaces: Wetting at the Nanometer Scale. Chem. Rev. 2006, 106, 1478– 1510, DOI: 10.1021/cr040376l[ACS Full Text
], [CAS], Google Scholar
4https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD28XivFWmur4%253D&md5=61d2a5eeab518fc927018d85abca4ef7Molecular structure of water at interfaces: Wetting at the nanometer scaleVerdaguer, A.; Sacha, G. M.; Bluhm, H.; Salmeron, M.Chemical Reviews (Washington, DC, United States) (2006), 106 (4), 1478-1510CODEN: CHREAY; ISSN:0009-2665. (American Chemical Society)A review. A review on recent studies on the structure and growth of water films at interfaces. The structure of water films at cryogenic temps. and at ambient conditions, water/vapor interface, water confined between flat mica surfaces, anal. of the layering structure of water using at. force microscopy, water layers on metals, structure of the water monolayer, and the effect of elec. fields on the formation of water necks are discussed. - 5Ewing, G. E. Ambient Thin Film Water on Insulator Surfaces. Chem. Rev. 2006, 106, 1511– 1526, DOI: 10.1021/cr040369x[ACS Full Text
], [CAS], Google Scholar
5https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD28XivVemu78%253D&md5=c6e44bb864522e3dfee0bd70069c0c60Ambient thin film water on insulator surfacesEwing, George E.Chemical Reviews (Washington, DC, United States) (2006), 106 (4), 1511-1526CODEN: CHREAY; ISSN:0009-2665. (American Chemical Society)A review. A review describes the methods for studying thin film water and their properties, and presents some insulator systems of ambient thin film water. - 6Woodruff, D. P. Quantitative Structural Studies of Corundum and Rocksalt Oxide Surfaces. Chem. Rev. 2013, 113, 3863– 3886, DOI: 10.1021/cr3002998[ACS Full Text
], [CAS], Google Scholar
6https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC3sXktV2iug%253D%253D&md5=92a058e31a61539b4baad00b0e94b416Quantitative Structural Studies Of Corundum and Rocksalt Oxide SurfacesWoodruff, D. PhillipChemical Reviews (Washington, DC, United States) (2013), 113 (6), 3863-3886CODEN: CHREAY; ISSN:0009-2665. (American Chemical Society)A review. Topics discussed include: surface of corundum-phase solids such as aluminum oxide, chromium oxide, iron oxides, vanadium oxide and adsorbate structure; and rocksalt structure oxide surface such surface of magnesia and nickel oxide. - 7Anderson, P. J.; Horlock, R. F.; Oliver, J. F. Interaction of Water with the Magnesium Oxide Surface. Trans. Faraday Soc. 1965, 61, 2754– 2762, DOI: 10.1039/tf9656102754[Crossref], [CAS], Google Scholar7https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaF28XkslOntA%253D%253D&md5=e4d82c4467ab9b0c1645bf64f46663ccInteraction of water with the magnesium oxide surfaceAnderson, P. J.; Horlock, R. F.; Oliver, J. F.Transactions of the Faraday Society (1965), 61 (12), 2754-62CODEN: TFSOA4; ISSN:0014-7672.The study illustrates the complexities of the processes involved and the marked dependence upon the previous history of the oxide. Thus, MgO, prepd. by decompn. of the hydroxide at >300° and held at 300° in vacuo for >5 hrs., retains H2O corresponding to a surface coverage σ ∼0.08 mol/A.2 An addnl. 0.1 mol/A.2 is adsorbed at room temp. and a relative pressure of 0.01. Subsequent desorption by prolonged pumping at a series of temps. yields steady-state values. A discontinuity at 250° with σ ∼0.1 suggests the existence of 2 distinct forms of adsorbed H2O, tentatively regarded as chemisorption (above 250°) and a rather strongly bound physisorption which is not completely removed on pumping below 200°. The ease with which desorption is accomplished is markedly dependent on the time during which adsorbed H2O is present on the sample, suggesting a slow conversion at room temp. to a more strongly bound state. These expts. plus ir data allow the conclusion that a surface, not previously dehydrated, is covered with surface hydroxyl groups at ∼0.11 mol/A.2 Further adsorption is in the form of mol. H2O. This value of σ, corresponding to surface satn., indicates that the relevant surface is the (100) face. The simplest model for H2O chemisorption on this face suggests OH groups in 2 different configurations. Desorption would then occur by interaction of a pair of adjacent OH groups, one of each type. The ir detns. support this model.
- 8Imad-Uddin Ahmed, S.; Perry, S. S.; El-Bjeirami, O. Desorption and Reaction of Water on MgO(100) Studied as a Function of Surface Preparation. J. Phys. Chem. B 2000, 104, 3343– 3348, DOI: 10.1021/jp9934275
- 9Johnson, M. A.; Stefanovich, E. V.; Truong, T. N.; Günster, J.; Goodman, D. W. Dissociation of Water at the MgO(100)–Water Interface: Comparison of Theory with Experiment. J. Phys. Chem. B 1999, 103, 3391– 3398, DOI: 10.1021/jp983729r[ACS Full Text
], [CAS], Google Scholar
9https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1MXit1Wjsrk%253D&md5=12f947a6a045f8f665a16fb37a551c67Dissociation of Water at the MgO(100)-Water Interface: Comparison of Theory with ExperimentJohnson, Michael A.; Stefanovich, Eugene V.; Truong, Thanh N.; Guenster, Jens; Goodman, D. W.Journal of Physical Chemistry B (1999), 103 (17), 3391-3398CODEN: JPCBFK; ISSN:1089-5647. (American Chemical Society)Dissociative chemisorption of H2O at the MgO(100)-water interface has been investigated both exptl. and theor. In particular, metastable impact electron spectroscopy (MIES) was used to image the d. of occupied states on the MgO(100)/Mo(100) surface for various degrees of water exposure. After multilayer water desorption, spectral features typical of surface hydroxyls are present. To further study the possibility of dissociative chemisorption of water, a theor. and computational method called CECILIA (combined embedded cluster at the interface with liq. approach) was used to calc. the geometry, energetics, and electronic d. of states (DOS) for interfacial species. Consistent with expt., our theor. results predict that dissociative adsorption of H2O at the MgO(100)-water interface is energetically more favorable than mol. adsorption. The stabilization of charged OH- and H+ interface adsorbates is due to polarization of the surrounding solvent. - 10Giordano, L.; Goniakowski, J.; Suzanne, J. Partial Dissociation of Water Molecules in the (3 × 2) Water Monolayer Deposited on the MgO (100) Surface. Phys. Rev. Lett. 1998, 81, 1271– 1273, DOI: 10.1103/PhysRevLett.81.1271[Crossref], [CAS], Google Scholar10https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1cXltVSrtb8%253D&md5=14dae5836bf63c4e17600cbd6f7b2eadPartial Dissociation of Water Molecules in the (3×2) Water Monolayer Deposited on the MgO(100) SurfaceGiordano, Livia; Goniakowski, Jacek; Suzanne, JeanPhysical Review Letters (1998), 81 (6), 1271-1273CODEN: PRLTAO; ISSN:0031-9007. (American Physical Society)Using the ab initio total energy method based on the gradient-cor. local d. approxn. the authors have modeled the exptl. obsd. (3×2) H2O monolayer on the MgO (100) surface. The lateral interactions between the adsorbed H2O mols., the formation of H bonds, and the resulting strong dimerization of the adsorbate promote the dissocn. of 2 out of 6 H2O mols. in the surface unit cell. Although, on the theor. grounds, H2O dissocn. on a defective MgO surface was already reported, this is the 1st theor. evidence of H2O dissocn. on the perfect MgO (100) surface.
- 11Odelius, M. Mixed Molecular and Dissociative Water Adsorption on MgO [100]. Phys. Rev. Lett. 1999, 82, 3919– 3922, DOI: 10.1103/PhysRevLett.82.3919[Crossref], [CAS], Google Scholar11https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1MXjtF2gtrs%253D&md5=2890380f637997c346c22aa1301dd82aMixed Molecular and Dissociative Water Adsorption on MgO[100]Odelius, MichaelPhysical Review Letters (1999), 82 (19), 3919-3922CODEN: PRLTAO; ISSN:0031-9007. (American Physical Society)First principles mol. dynamics (MD) simulations, of H2O adsorption on the MgO[100] surface, was performed to det. the mol. structure and chem. nature of the adsorbed H2O at varying coverage. Dissociative adsorption was stabilized by hydrogen bond donation from neighboring H2O mols. The dissocn. barrier had a strong dependence on coverage. Spontaneous dissocn. was obsd. in picosecond MD simulations >1/2 monolayer (ML) coverage. Ordered structures with c[3×2] symmetry were examd. at 2/3 and 1 ML coverage. The ordered c[3×2] phase consisted of a mixt. of dissocd. and mol. adsorbed mols.
- 12Delle Site, L.; Alavi, A.; Lynden-Bell, R. M. The Structure and Spectroscopy of Monolayers of Water on MgO: an Ab Initio Study. J. Chem. Phys. 2000, 113, 3344– 3350, DOI: 10.1063/1.1287276[Crossref], [CAS], Google Scholar12https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3cXlslKktrk%253D&md5=50a177670033a1d385bda8c4e545d3d0The structure and spectroscopy of monolayers of water on MgO. An ab initio studyDelle Site, L.; Alavi, A.; Lynden-Bell, R. M.Journal of Chemical Physics (2000), 113 (8), 3344-3350CODEN: JCPSA6; ISSN:0021-9606. (American Institute of Physics)The structure and energetics of a monolayer of water on a perfect MgO substrate is investigated by ab initio calcns. Several min. in the potential energy surface were found including both physisorbed and chemisorbed states in which one third of the water mols. were dissocd. In the more stable of the physisorbed states, the water mols. were not all parallel to the surface, but some showed hydrogen bonding with surface O ions. Even in the physisorbed state, the geometry of these surface H-bonded water mols. were distorted relative to the bulk. One of the stable chemisorbed states was the same as that found in earlier work by Giordano et al. [Phys. Rev. Lett. 81, 1271 (1998)]. Two more stable chemisorbed structures were found in which strong H-bonds to the hydroxide ions in the water layer were formed. The existence of different min. appears to be the result of a subtle interplay between H-bonding between adsorbed species and with the surface oxide ions. Harmonic vibrational frequencies were detd. for both a chemisorbed and a physisorbed states and spectroscopic features which should discriminate between chemisorbed and physisorbed states are identified.
- 13Jug, K.; Heidberg, B.; Bredow, T. Cyclic Cluster Study of Water Adsorption Structures on the MgO(100) Surface. Surf. Sci. 2007, 601, 1529– 1535, DOI: 10.1016/j.susc.2006.12.092[Crossref], [CAS], Google Scholar13https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2sXjtVWrurs%253D&md5=091d22ecfaa300a853eea461fbb9da88Cyclic cluster study of water adsorption structures on the MgO(100) surfaceJug, Karl; Heidberg, Bettina; Bredow, ThomasSurface Science (2007), 601 (6), 1529-1535CODEN: SUSCAS; ISSN:0039-6028. (Elsevier B.V.)Cyclic cluster calcns. were performed with the quantum chem. method MSINDO to elucidate the relative stabilities of c(4 × 2), p(3 × 2) and (1 × 1) overlayer structures of water mols. on the MgO(1 0 0) surface. For the c(4 × 2) and p(3 × 2) structures both mol. adsorption and partially dissocd. adsorption were considered. In agreement with earlier theor. studies partial dissocn. was found to be more stable than mol. adsorption. For the c(4 × 2) structure both monolayer and double layer coverage were studied. Adsorption was found to be more stabilized with increasing degree of dissocn. until 50% of the water mols. were dissocd. In the case of 50% dissocd. water mols. we found that one quarter of the Mg atoms were pulled out of the MgO surface when surface relaxation was taken into account. A new structure for the fully dissocd. (1 × 1) water monolayer was found which is considerably more stable than previously studied arrangements. In all cases surface relaxation was found to be important. The most stable structures of c(4 × 2), p(3 × 2) and (1 × 1) symmetry have adsorption energies which differ by no more than 13 kJ/mol. This offers an explanation of phase transitions of overlayer structures found by expts. between 180 and 300 K.
- 14Lynden-Bell, R.; Delle Site, L.; Alavi, A. Structures of Adsorbed Water Layers on MgO: an Ab Initio Study. Surf. Sci. 2002, 496, L1– L6, DOI: 10.1016/S0039-6028(01)01669-7[Crossref], [CAS], Google Scholar14https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3MXptFCmsLo%253D&md5=299a663086409c99ffda792ee2003f9dStructures of adsorbed water layers on MgO. An ab initio studyLynden-Bell, R. M.; Delle Site, L.; Alavi, A.Surface Science (2002), 496 (1-2), L1-L6CODEN: SUSCAS; ISSN:0039-6028. (Elsevier Science B.V.)A systematic search using an ab initio d.-functional method was carried out for energy min. for a monolayer of water on MgO. Min. were sought in which one third of the water mols. were dissocd., and the obsd. p(3×2) symmetry satisfied. Six such min. were found, 3 of which are within 300kB per water mol. of the lowest energy structure. We also found a structure with a similar energy with (2×2) symmetry and half the water mols. dissocd. The structures are stabilized by the donation of 3 H-bonds to each hydroxide ion.
- 15Jug, K.; Heidberg, B.; Bredow, T. Molecular Dynamics Study of Water Adsorption Structures on the MgO(100) Surface. J. Phys. Chem. C 2007, 111, 6846– 6851, DOI: 10.1021/jp067651n[ACS Full Text
], [CAS], Google Scholar
15https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2sXktFynt70%253D&md5=f4c597d9925f6bb7666a299035d1825bMolecular Dynamics Study of Water Adsorption Structures on the MgO(100) SurfaceJug, Karl; Heidberg, Bettina; Bredow, ThomasJournal of Physical Chemistry C (2007), 111 (18), 6846-6851CODEN: JPCCCK; ISSN:1932-7447. (American Chemical Society)Semiempirical MSINDO calcns. were performed for the study of structure and stability of c(4 × 2), p(3 × 2), and (1 × 1) overlayers of H2O on the MgO(100) surface. Born-Oppenheimer mol. dynamics (MD) techniques were used to simulate the changes in the adsorption at 300 K compared to that at 0 K. A partially dissocd. double layer of the c(4 × 2) structure with coverage θ = 3/2 attacks the MgO surface at 300 K. The hydroxylated (1 × 1) overlayer structure appears to be equally aggressive toward the MgO surface at this temp. Nucleation for the process of Mg(OH)2 formation was also obsd. - 16Ončák, M.; Włlodarczyk, R.; Sauer, J. Water on the MgO(001) Surface: Surface Reconstruction and Ion Solvation. J. Phys. Chem. Lett. 2015, 6, 2310– 2314, DOI: 10.1021/acs.jpclett.5b00885[ACS Full Text
], [CAS], Google Scholar
16https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC2MXps1akur8%253D&md5=0baf86910c00e2eae193468bf1a84639Water on the MgO(001) Surface: Surface Reconstruction and Ion SolvationOncak, Milan; Wlodarczyk, Radoslaw; Sauer, JoachimJournal of Physical Chemistry Letters (2015), 6 (12), 2310-2314CODEN: JPCLCD; ISSN:1948-7185. (American Chemical Society)The interaction of water with the MgO(001) surface under ambient conditions is investigated by d. functional theory combined with statistical thermodn. For water loadings of more than one monolayer, we show that the std. structure model, a fully hydroxylated surface, needs to be revised. Reconstructed surfaces, involving hydrated/hydroxylated Mg2+ ions above the surface, are more stable. These findings provide a consistent picture for surface hydroxylation between low and high water coverage that is in agreement with available XPS data. - 17Akabayov, B.; Doonan, C. J.; Pickering, I. J.; George, G. N.; Sagi, I. Using Softer X-ray Absorption Spectroscopy to Probe Biological Systems. J. Synchr. Rad. 2005, 12, 392– 401, DOI: 10.1107/S0909049505010150[Crossref], [PubMed], [CAS], Google Scholar17https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2MXltlCns7w%253D&md5=3a58ddbc51c9a6a125d72b7ba4ff0d43Using softer X-ray absorption spectroscopy to probe biological systemsAkabayov, Barak; Doonan, Christian J.; Pickering, Ingrid J.; George, Graham N.; Sagi, IritJournal of Synchrotron Radiation (2005), 12 (4), 392-401CODEN: JSYRES; ISSN:0909-0495. (Blackwell Publishing Ltd.)Many inorg. species are now recognized as being essential for life, including many forms of sulfur, phosphate and numerous classes of metal ions. For example, recent progress in the fields of biochem. and biol. has pointed out the crit. importance of sulfur in the biosynthesis of vital cofactors and active sites in proteins, and in the complex reaction mechanisms often involved. Special attention has also been drawn to the diverse roles of alk. (Na+, K+) and alk. earth (Mg2+, Ca2+) metal ions in mediating the activity of RNA, proteins and many processes in living cells. While the general effect of these ions in biol. is mostly understood, information on their detailed role is deficient. Here the application of softer x-ray absorption spectroscopy (XAS) to probe the local structural and electronic environment of such ions within their biol. complexes and during physiol. reactions is discussed. In addn., the required exptl. set-up and the difficulties assocd. with conducting softer XAS expts. on biol. samples are presented.
- 18Capocasa, G.; Sessa, F.; Tavani, F.; Monte, M.; Olivo, G.; Pascarelli, S.; Lanzalunga, O.; Di Stefano, S.; D’Angelo, P. Coupled X-ray Absorption/UV-vis Monitoring of Fast Oxidation Reactions Involving a Nonheme Iron-Oxo Complex. J. Am. Chem. Soc. 2019, 141, 2299– 2304, DOI: 10.1021/jacs.8b08687[ACS Full Text
], [CAS], Google Scholar
18https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1MXht1ansr4%253D&md5=f3e41d41a49eae461da02fcf69e5b404Coupled X-ray Absorption/UV-vis Monitoring of Fast Oxidation Reactions Involving a Nonheme Iron-Oxo ComplexCapocasa, Giorgio; Sessa, Francesco; Tavani, Francesco; Monte, Manuel; Olivo, Giorgio; Pascarelli, Sakura; Lanzalunga, Osvaldo; Di Stefano, Stefano; D'Angelo, PaolaJournal of the American Chemical Society (2019), 141 (6), 2299-2304CODEN: JACSAT; ISSN:0002-7863. (American Chemical Society)Time-resolved X-ray absorption (XAS) and UV-vis spectroscopies with millisecond resoln. are used simultaneously to investigate oxidn. reactions of org. substrates by nonheme iron activated species. In particular, the oxidn. processes of arylsulfides and benzyl alcs. by a nonheme iron-oxo complex have been studied. We show for the first time that the pseudo-first-order rate consts. of fast bimol. processes in soln. (milliseconds and above) can be detd. by time-resolved XAS technique. By following the Fe K-edge energy shift, it is possible to detect the rate of iron oxidn. state evolution that matches that of the bimol. reaction in soln. The kinetic const. values obtained by XAS are in perfect agreement with those obtained by means of the concomitant UV-vis detection. This combined approach has the potential to provide unique insights into reaction mechanisms in the liq. phase that involve changes of the oxidn. state of a metal center, and it is particularly useful in complex chem. systems where possible interferences from species present in soln. could make it impossible to use other detection techniques. - 19Tavani, F.; Martini, A.; Capocasa, G.; Di Stefano, S.; Lanzalunga, O.; D’Angelo, P. Direct Mechanistic Evidence for a Non-Heme Complex Reaction through a Multivariate XAS Analysis. Inorg. Chem. 2020, 59, 9979– 9989, DOI: 10.1021/acs.inorgchem.0c01132[ACS Full Text
], [CAS], Google Scholar
19https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXht1Gms77L&md5=12e34f9e364b915a323d7739003d3795Direct Mechanistic Evidence for a Nonheme Complex Reaction through a Multivariate XAS AnalysisTavani, Francesco; Martini, Andrea; Capocasa, Giorgio; Di Stefano, Stefano; Lanzalunga, Osvaldo; D'Angelo, PaolaInorganic Chemistry (2020), 59 (14), 9979-9989CODEN: INOCAJ; ISSN:0020-1669. (American Chemical Society)We propose a method to directly det. the mechanism of the reaction between the nonheme complex FeII(tris(2-pyridylmethyl)amine) ([FeII(TPA)(CH3CN)2]2+) and peracetic acid (AcOOH) in CH3CN, working at room temp. A multivariate anal. is applied to the time-resolved coupled energy-dispersive X-ray absorption spectroscopy (EDXAS) reaction data, from which a set of spectral and concn. profiles for the reaction key species is derived. These "pure" extd. EDXAS spectra are then quant. characterized by full multiple scattering (MS) calcns. As a result, structural information for the elusive reaction intermediates [FeIII(TPA)(κ2-OOAc)]2+ and [FeIV(TPA)(O)(X)]+/2+ is obtained, and it is suggested that X = AcO- in opposition to X = CH3CN. The employed strategy is promising both for the spectroscopic characterization of reaction intermediates that are labile or silent to the conventional spectroscopic techniques, as well as for the mechanistic understanding of complex redox reactions involving org. substrates. A combined multivariate and theor. XAS anal. was proven to be a powerful method to obtain direct evidence for the mechanism of the reaction between the nonheme complex FeII(tris(2-pyridymethyl)amine) ([FeII(TPA)(CH3CN)2]2+) and peroxyacetic acid. This approach allowed to det. the time evolution of the concn. profiles for all reaction intermediates and to quant. characterize their structures, suggesting the sixth coordinating ligand of the nonheme oxo complex [FeIV(TPA)(O)(X)]+/2+ is X = AcO- in opposition to X = CH3CN. - 20Busato, M.; Melchior, A.; Migliorati, V.; Colella, A.; Persson, I.; Mancini, G.; Veclani, D.; D’Angelo, P. Elusive Coordination of the Ag+ Ion in Aqueous Solution: Evidence for a Linear Structure. Inorg. Chem. 2020, 59, 17291– 17302, DOI: 10.1021/acs.inorgchem.0c02494[ACS Full Text
], [CAS], Google Scholar
20https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXitl2qtLbL&md5=c833cf5ea5992612bdb7750a96c2c468Elusive Coordination of the Ag+ Ion in Aqueous Solution: Evidence for a Linear StructureBusato, Matteo; Melchior, Andrea; Migliorati, Valentina; Colella, Andrea; Persson, Ingmar; Mancini, Giordano; Veclani, Daniele; D'Angelo, PaolaInorganic Chemistry (2020), 59 (23), 17291-17302CODEN: INOCAJ; ISSN:0020-1669. (American Chemical Society)X-ray absorption spectroscopy (XAS) has been employed to study the coordination of the Ag+ ion in aq. soln. The conjunction of extended X-ray absorption fine structure (EXAFS) and X-ray absorption near-edge structure (XANES) data anal. provided results suggesting the preference for a first shell linear coordination with a mean Ag-O bond distance of 2.34(2) Å, different from the first generally accepted tetrahedral model with a longer mean Ag-O bond distance. Ab initio mol. dynamics simulations with the Car-Parrinello approach (CPMD) were also performed and were able to describe the coordination of the hydrated Ag+ ion in aq. soln. in very good agreement with the exptl. data. The high sensitivity for the closest environment of the photoabsorber of the EXAFS and XANES techniques, together with the long-range information provided by CPMD and large-angle X-ray scattering (LAXS), allowed us to reconstruct the three-dimensional model of the coordination geometry around the Ag+ ion in aq. soln. The obtained results from expts. and theor. simulations provided a complex picture with a certain amt. of water mols. with high configurational disorder at distances comprised between the first and second hydration spheres. This evidence may have caused the proliferation of the coordination nos. that have been proposed so far for Ag+ in water. Altogether these data show how the description of the hydration of the Ag+ ion in aq. soln. can be complex, differently from other metal species where hydration structures can be described by clusters with well-defined geometries. This diffuse hydration shell causes the Ag-O bond distance in the linear [Ag(H2O)2]+ ion to be ca. 0.2 Å longer than in isolated ions in solid state. Extended X-ray absorption fine structure (EXAFS), X-ray absorption near-edge structure (XANES), large-angle X-ray scattering (LAXS), and Car-Parrinello mol. dynamics (CPMD) provided a reliable detn. of the elusive hydration structure of the Ag+ ion. A linear first shell with a mean Ag-O distance of 2.34(2) Å is obsd., surrounded by a few water mols. at a relatively short distance, ca. 2.6 Å, and another set of waters as a swarm at ca. 4 Å. - 21Isegawa, K.; Ueda, K.; Hiwasa, S.; Amemiya, K.; Mase, K.; Kondoh, H. Formation of Carbonate on Ag(111) under Exposure to Ethylene and Oxygen Gases Evidenced by Near Ambient Pressure XPS and NEXAFS. Chem. Lett. 2019, 48, 159– 162, DOI: 10.1246/cl.180891[Crossref], [CAS], Google Scholar21https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1MXotlKit7o%253D&md5=854e5bca31af9b7c9789a6abded5a8a8Formation of carbonate on Ag(111) under exposure to ethylene and oxygen gases evidenced by near ambient pressure XPS and NEXAFSIsegawa, Kazuhisa; Ueda, Kohei; Hiwasa, Satoru; Amemiya, Kenta; Mase, Kazuhiko; Kondoh, HiroshiChemistry Letters (2019), 48 (2), 159-162CODEN: CMLTAG; ISSN:0366-7022. (Chemical Society of Japan)The active oxygen species for ethylene epoxidn. on Ag surfaces has been a long-standing issue. We conducted in situ observations of Ag(111) surfaces under exposure to ethylene and oxygen gases with near ambient pressure (NAP) XPS and near-edge X-ray absorption fine structure spectroscopy. Combined results of these spectroscopies evidence that a carbonate species with a flat-lying configuration is formed on the Ag(111) surface at 370-500K under exposure to the NAP gas mixt. of ethylene and oxygen.
- 22Castán-Guerrero, C.; Krizmancic, D.; Bonanni, V.; Edla, R.; Deluisa, A.; Salvador, F.; Rossi, G.; Panaccione, G.; Torelli, P. A Reaction Cell for Ambient Pressure Soft X-ray Absorption Spectroscopy. Rev. Sci. Instrum. 2018, 89, 054101, DOI: 10.1063/1.5019333[Crossref], [PubMed], [CAS], Google Scholar22https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1cXptVWksb4%253D&md5=5931940d1810ce8e49c1dc57a2eaea44A reaction cell for ambient pressure soft x-ray absorption spectroscopyCastan-Guerrero, C.; Krizmancic, D.; Bonanni, V.; Edla, R.; Deluisa, A.; Salvador, F.; Rossi, G.; Panaccione, G.; Torelli, P.Review of Scientific Instruments (2018), 89 (5), 054101/1-054101/8CODEN: RSINAK; ISSN:0034-6748. (American Institute of Physics)The authors present a new exptl. setup for performing x-ray Absorption Spectroscopy (XAS) in the soft X-ray range at ambient pressure. The ambient pressure XAS setup is fully compatible with the ultra high vacuum environment of a synchrotron radiation spectroscopy beamline end station by ultrathin Si3N4 membranes acting as windows for the x-ray beam and seal of the atm. sample environment. The XAS detection is performed in total electron yield (TEY) mode by probing the drain current from the sample with a picoammeter. The high signal/noise ratio achievable in the TEY mode, combined with a continuous scanning of the x-ray energies, makes it possible recording XAS spectra in a few seconds. The 1st results show the performance of this setup to record fast XAS spectra from sample surfaces exposed at atm. pressure, even in the case of highly insulating samples. The use of a permanent magnet inside the reaction cell enables the measurement of x-ray MCD at ambient pressure. (c) 2018 American Institute of Physics.
- 23Braglia, L.; Fracchia, M.; Ghigna, P.; Minguzzi, A.; Meroni, D.; Edla, R.; Vandichel, M.; Ahlberg, E.; Cerrato, G.; Torelli, P. Understanding Solid-Gas Reaction Mechanisms by Operando Soft X-Ray Absorption Spectroscopy at Ambient Pressure. J. Phys. Chem. C 2020, 124, 14202– 14212, DOI: 10.1021/acs.jpcc.0c02546[ACS Full Text
], [CAS], Google Scholar
23https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXhtV2ks7%252FK&md5=417d1e4ba6e318d56920dbe62b6da537Understanding Solid-Gas Reaction Mechanisms by Operando Soft X-Ray Absorption Spectroscopy at Ambient PressureBraglia, Luca; Fracchia, Martina; Ghigna, Paolo; Minguzzi, Alessandro; Meroni, Daniela; Edla, Raju; Vandichel, Matthias; Ahlberg, Elisabet; Cerrato, Giuseppina; Torelli, PieroJournal of Physical Chemistry C (2020), 124 (26), 14202-14212CODEN: JPCCCK; ISSN:1932-7447. (American Chemical Society)Ambient-pressure operando soft X-ray absorption spectroscopy (soft-XAS) was applied to study the reactivity of hydroxylated SnO2 nanoparticles toward reducing gases. H2 was first used as a test case, showing that the gas phase and surface states can be simultaneously probed: Soft-XAS at the O K-edge gains sensitivity toward the gas phase, while at the Sn M4,5-edges, tin surface states are explicitly probed. Results obtained by flowing hydrocarbons (CH4 and CH3CHCH2) unequivocally show that these gases react with surface hydroxyl groups to produce water without producing carbon oxides and release electrons that localize on Sn to eventually form SnO. The partially reduced SnO2-x layer at the surface of SnO2 is readily reoxidized to SnO2 by treating the sample with O2 at mild temps. (>200°C), revealing the nature of "electron sponge" of tin oxide. The expts., combined with DFT calcns., allowed devising of a mechanism for dissociative hydrocarbon adsorption on SnO2, involving direct redn. of Sn sites at the surface via cleavage of C-H bonds and the formation of methoxy- and/or methyl-tin species at the surface. - 24Braglia, L.; Tavani, F.; Mauri, S.; Edla, R.; Krizmancic, D.; Tofoni, A.; Colombo, V.; D’Angelo, P.; Torelli, P. Catching the Reversible Formation and Reactivity of Surface Defective Sites in Metal–Organic Frameworks: An Operando Ambient Pressure-NEXAFS Investigation. J. Phys. Chem. Lett. 2021, 12, 9182– 9187, DOI: 10.1021/acs.jpclett.1c02585[ACS Full Text
], [CAS], Google Scholar
24https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3MXitVaitL%252FO&md5=1559f49ab51f13270ae01c20fe258751Catching the Reversible Formation and Reactivity of Surface Defective Sites in Metal-Organic Frameworks: An Operando Ambient Pressure-NEXAFS InvestigationBraglia, Luca; Tavani, Francesco; Mauri, Silvia; Edla, Raju; Krizmancic, Damjan; Tofoni, Alessandro; Colombo, Valentina; D'Angelo, Paola; Torelli, PieroJournal of Physical Chemistry Letters (2021), 12 (37), 9182-9187CODEN: JPCLCD; ISSN:1948-7185. (American Chemical Society)In this work, we apply for the first time ambient pressure operando soft X-ray absorption spectroscopy (XAS) to investigate the location, structural properties, and reactivity of the defective sites present in the prototypical metal-org. framework HKUST-1. We obtained direct evidence that Cu+ defective sites form upon temp. treatment of the powd. form of HKUST-1 at 160 °C and that they are largely distributed on the material surface. Further, a thorough structural characterization of the Cu+/Cu2+ dimeric complexes arising from the temp.-induced dehydration/decarboxylation of the pristine Cu2+/Cu2+ paddlewheel units is reported. In addn. to characterizing the surface defects, we demonstrate that CO2 may be reversibly adsorbed and desorbed from the surface defective Cu+/Cu2+ sites. These findings show that ambient pressure soft-XAS, combined with state-of-the-art theor. calcns., allowed us to shed light on the mechanism involving the decarboxylation of the paddlewheel units on the surface to yield Cu+/Cu2+ complexes and their reversible restoration upon exposure to gaseous CO2.. - 25Tavani, F.; Fracchia, M.; Tofoni, A.; Braglia, L.; Jouve, A.; Morandi, S.; Manzoli, M.; Torelli, P.; Ghigna, P.; D’Angelo, P. Structural and Mechanistic Insights into Low-Temperature CO Oxidation over a Prototypical High Entropy Oxide by Cu L-edge Operando Soft X-ray absorption Spectroscopy. Phys. Chem. Chem. Phys. 2021, 23, 26575– 26584, DOI: 10.1039/D1CP03946F[Crossref], [PubMed], [CAS], Google Scholar25https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3MXisVyku7bP&md5=251ff77734ad8011242619e208d468e0Structural and mechanistic insights into low-temperature CO oxidation over a prototypical high entropy oxide by Cu L-edge operando soft X-ray absorption spectroscopyTavani, Francesco; Fracchia, Martina; Tofoni, Alessandro; Braglia, Luca; Jouve, Andrea; Morandi, Sara; Manzoli, Maela; Torelli, Piero; Ghigna, Paolo; D'Angelo, PaolaPhysical Chemistry Chemical Physics (2021), 23 (46), 26575-26584CODEN: PPCPFQ; ISSN:1463-9076. (Royal Society of Chemistry)High entropy oxides (HEOs) are an emerging class of materials constituted by multicomponent systems that are receiving special interest as candidates for obtaining novel and desirable properties. In this study we present a detailed investigation of the relevant intermediates arising at the surface of the prototypical HEO Mg0.2Co0.2Ni0.2Cu0.2Zn0.2O during low-temp. CO oxidn. By combining Cu L2,3-edge operando soft X-ray absorption spectroscopy (soft-XAS) with d. functional theory simulations and in situ FT-IR spectroscopy, we propose that upon HEO exposure to CO at 235 °C reduced Cu(I) sites arise mostly coordinated to activated CO mols. and partly to bidentate carbonate species. When the HEO surface is then exposed to a stoichiometric mixt. of CO + 1/2O2 at 250 °C, CO2 is produced while bidentate carbonate moieties remain interacting with the Cu(I) sites. We structurally characterize the carbonate and CO preferential adsorption geometries on the Cu(I) surface metal centers, and find that CO adopts a bent conformation that may energetically favor its subsequent oxidn. The unique surface, structural and electronic sensitivity of soft-XAS coupled with the developed data anal. work-flow and supported by FT-IR spectroscopy may be beneficial to characterize often elusive surface properties of systems of catalytic interest.
- 26Martini, A.; Guda, S.; Guda, A.; Smolentsev, G.; Algasov, A.; Usoltsev, O.; Soldatov, M.; Bugaev, A.; Rusalev, Y.; Lamberti, C.; Soldatov, A. PyFitit: The Software for Quantitative Analysis of XANES Spectra Using Machine-Learning Algorithms. Comput. Phys. Commun. 2019, 107064Google ScholarThere is no corresponding record for this reference.
- 27Martini, A.; Guda, A. A.; Guda, S. A.; Dulina, A.; Tavani, F.; D’Angelo, P.; Borfecchia, E.; Soldatov, A. V. In Synchrotron Radiation Science and Applications. Springer Proceedings in Physics; Di Cicco, A., Giuli, G., Trapananti, A., Eds.; Springer, 2021; Vol. 220; pp 65– 84.
- 28Tavani, F.; Capocasa, G.; Martini, A.; Sessa, F.; Di Stefano, S.; Lanzalunga, O.; D’Angelo, P. Direct Structural and Mechanistic Insights into Fast Bimolecular Chemical Reactions in Solution through a Coupled XAS/UV-Vis Multivariate Statistical Analysis. Dalton Trans 2021, 50, 131– 142, DOI: 10.1039/D0DT03083J[Crossref], [PubMed], [CAS], Google Scholar28https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXisVejs7jE&md5=b45e428fd885b912fc580682a96acf4bDirect structural and mechanistic insights into fast bimolecular chemical reactions in solution through a coupled XAS/UV-Vis multivariate statistical analysisTavani, Francesco; Capocasa, Giorgio; Martini, Andrea; Sessa, Francesco; Di Stefano, Stefano; Lanzalunga, Osvaldo; D'Angelo, PaolaDalton Transactions (2021), 50 (1), 131-142CODEN: DTARAF; ISSN:1477-9226. (Royal Society of Chemistry)In this work, we obtain detailed mechanistic and structural information on bimol. chem. reactions occurring in soln. on the second to millisecond time scales through the combination of a statistical, multivariate and theor. anal. of time-resolved coupled X-ray Absorption Spectroscopy (XAS) and UV-Vis data. We apply this innovative method to investigate the sulfoxidn. of p-cyanothioanisole and p-methoxythioanisole by the nonheme FeIV oxo complex [N4Py·FeIV(O)]2+ (N4Py = N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine) in acetonitrile at room temp. By employing statistical and multivariate techniques we det. the no. of key chem. species involved along the reaction paths and derive spectral and concn. profiles for the reaction intermediates. From the quant. anal. of the XAS spectra we obtain accurate structural information for all reaction intermediates and provide the first structural characterization in soln. of complex [N4Py·FeIII(OH)]2+. The employed strategy is promising for the spectroscopic characterization of transient species formed in redox reactions.
- 29Tavani, F.; Capocasa, G.; Martini, A.; Sessa, F.; Di Stefano, S.; Lanzalunga, O.; D’Angelo, P. Activation of C-H Bonds by a Nonheme Iron(IV)-Oxo Complex: Mechanistic Evidence through a Coupled EDXAS/UV-Vis Multivariate Analysis. Phys. Chem. Chem. Phys. 2021, 23, 1188– 1196, DOI: 10.1039/D0CP04304D[Crossref], [PubMed], [CAS], Google Scholar29https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXis1SgsL%252FO&md5=3520a37ba8568225c65af4781dcdff9dActivation of C-H bonds by a nonheme iron(IV)-oxo complex: mechanistic evidence through a coupled EDXAS/UV-Vis multivariate analysisTavani, Francesco; Capocasa, Giorgio; Martini, Andrea; Sessa, Francesco; Di Stefano, Stefano; Lanzalunga, Osvaldo; D'Angelo, PaolaPhysical Chemistry Chemical Physics (2021), 23 (2), 1188-1196CODEN: PPCPFQ; ISSN:1463-9076. (Royal Society of Chemistry)The understanding of reactive processes involving org. substrates is crucial to chem. knowledge and requires multidisciplinary efforts for its advancement. Herein, we apply a combined multivariate, statistical and theor. anal. of coupled time-resolved X-ray absorption (XAS)/UV-Vis data to obtain detailed mechanistic information for on the C-H bond activation of 9,10-dihydroanthracene (DHA) and diphenylmethane (Ph2CH2) by the nonheme FeIV-oxo complex [N4Py·FeIV(O)]2+ (N4Py = N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine) in CH3CN at room temp. Within this approach, we det. the no. of key chem. species present in the reaction mixts. and derive spectral and concn. profiles for the reaction intermediates. From the quant. anal. of the XAS spectra the transient intermediate species are structurally detd. As a result, it is suggested that, while DHA is oxidized by [N4Py·FeIV(O)]2+ with a hydrogen atom transfer-electron transfer (HAT-ET) mechanism, Ph2CH2 is oxidized by the nonheme iron-oxo complex through a HAT-radical dissocn. pathway. In the latter process, we prove that the intermediate FeIII complex [N4Py·FeIII(OH)]2+ is not able to oxidize the diphenylmethyl radical and we provide its structural characterization in soln. The employed combined exptl. and theor. strategy is promising for the spectroscopic characterization of transient intermediates as well as for the mechanistic investigation of redox chem. transformations on the second to millisecond time scales.
- 30Tavani, F.; Fracchia, M.; Pianta, N.; Ghigna, P.; Quartarone, E.; D’Angelo, P. Multivariate Curve Resolution Analysis of Operando XAS Data for the Investigation of the Lithiation Mechanisms in High Entropy Oxides. Chem. Phys. Lett. 2020, 760, 137968, DOI: 10.1016/j.cplett.2020.137968[Crossref], [CAS], Google Scholar30https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXitVKgur3F&md5=0d3af0d5788149646bed68d0a0941318Multivariate curve resolution analysis of operando XAS data for the investigation of the lithiation mechanisms in high entropy oxidesTavani, Francesco; Fracchia, Martina; Pianta, Nicolo; Ghigna, Paolo; Quartarone, Eliana; D'Angelo, PaolaChemical Physics Letters (2020), 760 (), 137968CODEN: CHPLBC; ISSN:0009-2614. (Elsevier B.V.)Transition metal-based high entropy oxides (TM-HEO) have recently been gaining interest for their potential use as anodes in next-generation Li-ion batteries. In such systems, however, the lithiation/delithiation mechanisms remain a matter of ongoing investigation. In this work we demonstrate the suitability of Multivariate Curve Resoln. (MCR) of operando X-ray absorption spectroscopy (XAS) data to study the lithiation mechanisms in the TM-HEO (Mg0.2Co0.2Ni0.2Cu0.2Zn0.2)O. Through the MCR anal., the no., nature and concn. evolution as a function of stored charge of all Cu-, Ni- and Co-related active species present during the first lithiation cycle is obtained.
- 31Kleiman, S.; Chaim, R. Thermal Stability of MgO Nanoparticles. Mater. Lett. 2007, 61, 4489– 4491, DOI: 10.1016/j.matlet.2007.02.032[Crossref], [CAS], Google Scholar31https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2sXpsFOrs7g%253D&md5=b4518b8554ce09b9274e98e11e5dadc1Thermal stability of MgO nanoparticlesKleiman, Sagiv; Chaim, RachmanMaterials Letters (2007), 61 (23-24), 4489-4491CODEN: MLETDJ; ISSN:0167-577X. (Elsevier B.V.)Thermal stability of nanocryst. MgO particles with av. diam. of 11 nm was investigated by annealing of the cold isostatically pressed compacts between 600 °C and 900 °C for various durations. Sintering time vs. grain radius at 800 °C demonstrated a linear line with the slope of ∼ 4 similar to that expected for surface diffusion. High resoln. scanning electron microscope images from different specimens showed a porous microstructure of interconnected particles typical for initial sintering. Arrhenius plot of the grain size data revealed the activation energy of 161 ±11 kJ mol-1 for the growth process in agreement with those reported for grain boundary grooving expts. It was found that MgO particles undergo coarsening already at temps. as low as 0.31 of the MgO m.p. (3125 K). Increase in the particle diam. and decrease in the surface area were assocd. with surface diffusion mechanism that leads to initial sintering between the particles.
- 32Aritani, H.; Yamada, H.; Nishio, T.; Shiono, T.; Imamura, S.; Kudo, M.; Hasegawa, S.; Tanaka, T.; Yoshida, S. Characterization of Li-Doped MgO Catalysts for Oxidative Coupling of Methane by Means of Mg K-Edge XANES. J. Phys. Chem. B 2000, 104, 10133– 10143, DOI: 10.1021/jp000291y[ACS Full Text
], [CAS], Google Scholar
32https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3cXntlKgurw%253D&md5=240385a1df9f596b0b0b5bbc4a687d6fCharacterization of Li-Doped MgO Catalysts for Oxidative Coupling of Methane by Means of Mg K-Edge XANESAritani, Hirofumi; Yamada, Hiroyuki; Nishio, Takashi; Shiono, Takeshi; Imamura, Seiichiro; Kudo, Masataka; Hasegawa, Sadao; Tanaka, Tsunehiro; Yoshida, SatohiroJournal of Physical Chemistry B (2000), 104 (44), 10133-10143CODEN: JPCBFK; ISSN:1089-5647. (American Chemical Society)To characterize active defect sites in the near-surface and bulk phase of MgO in Li-doped MgO, structural analyses were carried out by means of XRD, XPS, Mg K-edge XANES, and SEM techniques. For Li-MgO calcined at 873 K, Li doping at a low content (2.5 wt % as Li) brings about the formation of defect species only in the near-surface, which is due to the localization of doped Li ions in the surface. In this case, the catalytic species contg. a Li+-O- center exists in the surface region. At higher contents of more than 7.5 wt %, Li ions penetrate the MgO bulk, and its crystallinity decreases. The defect species possibly exist in the bulk phase. After oxidative coupling of methane reaction, the defect species are formed in the near-surface over MgO and Li-MgO. However, the C2 selectivity is much higher on Li-MgO than on MgO. It is concluded that the defect species contg. Li+-O- in both surface and bulk can act as the active species for producing C2 compds. with high selectivity. - 33Klysubun, W.; Kidkhunthod, P.; Tarawarakarn, P.; Sombunchoo, P.; Kongmark, C.; Limpijumnong, S.; Rujirawat, S.; Yimnirun, R.; Tumcharern, G.; Faungnawakij, K. SUT-NANOTEC-SLRI Beamline for X-ray Absorption Spectroscopy. J. Synchr. Rad. 2017, 24, 707– 716, DOI: 10.1107/S1600577517004830
- 34Singh, J.; Kumar, M.; Lee, I.-J.; Chae, K. X-ray Reflectivity and Near Edge X-ray Absorption Fine Structure Investigations of MgO Thin Films. Appl. Sci. Lett. 2017, 3.Google ScholarThere is no corresponding record for this reference.
- 35Yoshioka, S.; Tsuruta, K.; Yamamoto, T.; Yasuda, K.; Matsumura, S.; Ishikawa, N.; Kobayashi, E. X-ray Absorption Near Edge Structure and First-Principles Spectral Investigations of Cationic Disorder in MgAl2O4 Induced by Swift Heavy Ions. Phys. Chem. Chem. Phys. 2018, 20, 4962– 4969, DOI: 10.1039/C7CP07591J[Crossref], [PubMed], [CAS], Google Scholar35https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1cXitFOqsr8%253D&md5=85adb764971b46b118dafa1bfb9f04d6X-ray absorption near edge structure and first-principles spectral investigations of cationic disorder in MgAl2O4 induced by swift heavy ionsYoshioka, S.; Tsuruta, K.; Yamamoto, T.; Yasuda, K.; Matsumura, S.; Ishikawa, N.; Kobayashi, E.Physical Chemistry Chemical Physics (2018), 20 (7), 4962-4969CODEN: PPCPFQ; ISSN:1463-9076. (Royal Society of Chemistry)Cationic disorder in the MgAl2O4 spinel induced by swift heavy ions was investigated using the X-ray absorption near edge structure. With changes in the irradn. fluences of 200 MeV Xe ions, the Mg K-edge and Al K-edge spectra were synchronously changed. The calcd. spectra based on d. function theory indicate that the change in the exptl. spectra was due to cationic disorder between Mg in tetrahedral sites and Al in octahedral sites. These results suggest a high inversion degree to an extent that the completely random configuration is achieved in MgAl2O4 induced by the high d. electronic excitation under swift heavy ion irradn.
- 36Witte, K.; Streeck, C.; Mantouvalou, I.; Suchkova, S. A.; Lokstein, H.; Grötzsch, D.; Martyanov, W.; Weser, J.; Kanngieer, B.; Beckhoff, B.; Stiel, H. Magnesium K-Edge NEXAFS Spectroscopy of Chlorophyll A in Solution. J. Phys. Chem. B 2016, 120, 11619– 11627, DOI: 10.1021/acs.jpcb.6b05791[ACS Full Text
], [CAS], Google Scholar
36https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC28XhslCktrbM&md5=710f7e8c001b79ec3a236b2957bef4d9Magnesium K-Edge NEXAFS Spectroscopy of Chlorophyll a in SolutionWitte, Katharina; Streeck, Cornelia; Mantouvalou, Ioanna; Suchkova, Svetlana A.; Lokstein, Heiko; Groetzsch, Daniel; Martyanov, Wjatscheslav; Weser, Jan; Kanngiesser, Birgit; Beckhoff, Burkhard; Stiel, HolgerJournal of Physical Chemistry B (2016), 120 (45), 11619-11627CODEN: JPCBFK; ISSN:1520-5207. (American Chemical Society)The interaction of the central magnesium atom of chlorophyll a (Chl a) with its carbon and nitrogen backbone was investigated by magnesium (Mg) K near edge x-ray absorption fine structure (NEXAFS) spectroscopy in fluorescence detection mode. Chl a was measured as 1*10-2 mol/l ethanol soln., which represents an upper limit of concn. without aggregation and as dried droplets. For the first time, the investigation of the structure of Chl a in a liq. environment by means of x-ray absorption spectroscopy is demonstrated. A preedge feature in the dissolved as well as in dried Chl a NEXFAS spectra has been identified as a characteristic transition originating from the intact Chl a mol. This result is confirmed by theor. DFT calcns. leading to MOs (MO) which are mainly situated on the magnesium atom and nitrogen and carbon atoms from the pyrrole rings. The description is the first referring to the MO distribution with respect to the central Mg ion of Chl a and the surrounding atoms. Based there upon, new approaches for the investigations of dynamic processes of mols. in soln. and the structure-function relationships of photosynthetic pigments and pigment-protein complexes in their native environment can be developed. - 37Joly, Y. X-ray Absorption Near-Edge Structure Calculations Beyond the Muffin-Tin Approximation. Phys. Rev. B 2001, 63, 125120, DOI: 10.1103/PhysRevB.63.125120[Crossref], [CAS], Google Scholar37https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3MXhvV2qtrY%253D&md5=ff7c161f8eaa60274bd434cb6de6ea97x-ray absorption near-edge structure calculations beyond the muffin-tin approximationJoly, Y.Physical Review B: Condensed Matter and Materials Physics (2001), 63 (12), 125120/1-125120/10CODEN: PRBMDO; ISSN:0163-1829. (American Physical Society)A new scheme for calcg. the x-ray absorption near edge structure (XANES) based on the finite-difference method is proposed. It allows completely free potential shape and, in particular, is not constrained to the muffin-tin approxn. In approach, the calcn. of the final states is performed in real space. The Schrodinger equation is solved in a discrete form on the node points of a 3-dimensional grid. The unknowns are the values of the wave functions at the grid points. The validity of the method is shown on 2 different systems the metallic Cu and the CO mol.; then, the differences resulting from muffin-tin and non-muffin-tin calcns. are shown on different typical mols.
- 38Bunău, O.; Joly, Y. Self-Consistent Aspects of X-ray Absorption Calculations. J. Phys: Condens. Matter 2009, 21, 345501[Crossref], [PubMed], [CAS], Google Scholar38https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD1MXhtFCht77N&md5=ac5e837f05c62e7d8b5859f68768ef0fSelf-consistent aspects of X-ray absorption calculationsBunau, O.; Joly, Y.Journal of Physics: Condensed Matter (2009), 21 (34), 345501/1-345501/11CODEN: JCOMEL; ISSN:0953-8984. (Institute of Physics Publishing)We implemented a self-consistent, real-space x-ray absorption calcn. within the FDMNES code. We performed the self-consistency within several schemes and identified which one is the most appropriate. We show a method that allows a rigorous setting of the Fermi level and thus an estn. of the energy cutoff for the identification and elimination of the occupied states. We investigated what are the structures where one can afford performing the self-consistent calcn. at a lesser cluster radius than the absorption one. We exemplify the effects of the self-consistency at the K-edge and for several ref. cases, including the copper Cu and the rutile TiO2. We verified the robustness of our procedure on the transitional 3d and 4d elements. Although amelioration can be noticed, the self-consistency performed at the K-edge does not bring a major improvement of the calcd. spectra. Taking into consideration a non-self-consistent, non-spherical potential gives better results than a self-consistent muffin-tin approxn. calcn.
- 39Guda, S. A.; Guda, A. A.; Soldatov, M. A.; Lomachenko, K. A.; Bugaev, A. L.; Lamberti, C.; Gawelda, W.; Bressler, C.; Smolentsev, G.; Soldatov, A. V.; Joly, Y. Optimized Finite Difference Method for the Full-Potential XANES Simulations: Application to Molecular Adsorption Geometries in MOFs and Metal-Ligand Intersystem Crossing Transients. J. Chem. Th. Comp. 2015, 11, 4512– 4521, DOI: 10.1021/acs.jctc.5b00327
- 40Pankin, I.; Borfecchia, E.; Martini, A.; Lomachenko, K.; Lamberti, C.; Soldatov, A. DFT-assisted XANES Simulations to Discriminate Different Monomeric CuII Species in CHA Catalysts. Radiat. Phys. Chem. 2020, 175, 108510, DOI: 10.1016/j.radphyschem.2019.108510[Crossref], [CAS], Google Scholar40https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1MXhvFOiur7M&md5=8e2bf422a7e8a40e85ef945375cdc85bDFT-assisted XANES simulations to discriminate different monomeric CuII species in CHA catalystsPankin, I. A.; Borfecchia, E.; Martini, A.; Lomachenko, K. A.; Lamberti, C.; Soldatov, A. V.Radiation Physics and Chemistry (2020), 175 (), 108510CODEN: RPCHDM; ISSN:0969-806X. (Elsevier B.V.)Herein, we present Cu K-edge XANES (X-ray Absorption Near Edge Structure) simulations for different framework interacting Z-CuII species proposed to form as an active site after high-temp. activation in Cu-exchanged chabazite zeolites, representing promising materials for selective catalytic redn. of NOx in the presence of ammonia and direct conversion of methane to methanol. We critically compare the simulated spectra to previously collected data for an O2-activated Cu-chabazite sample. D. of states (DOS) calcns. allow us to get more insights in describing the nature of XANES features obsd. in the simulated spectra. To demonstrate the potential of the method, we finally explore the impact of systematic variations of selected structural parameters on the theor. XANES features.
- 41Amodeo, J.; Merkel, S.; Tromas, C.; Carrez, P.; Korte-Kerzel, S.; Cordier, P.; Chevalier, J. Dislocations and Plastic Deformation in MgO Crystals: A Review. Crystals 2018, 8, 240 DOI: 10.3390/cryst8060240[Crossref], [CAS], Google Scholar41https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1cXhvVWktLrK&md5=9e9aff857cf211adcc7067dbe0132009Dislocations and plastic deformation in MgO crystals: a reviewAmodeo, Jonathan; Merkel, Sebastien; Tromas, Christophe; Carrez, Philippe; Korte-Kerzel, Sandra; Cordier, Patrick; Chevalier, JeromeCrystals (2018), 8 (6), 240/1-240/53CODEN: CRYSBC; ISSN:2073-4352. (MDPI AG)This review paper focuses on dislocations and plastic deformation in magnesium oxide crystals. MgO is an archetype ionic ceramic with refractory properties which is of interest in several fields of applications such as ceramic materials fabrication, nano-scale engineering and Earth sciences. In its bulk single crystal shape, MgO can deform up to few percent plastic strain due to dislocation plasticity processes that strongly depend on external parameters such as pressure, temp., strain rate, or crystal size. This review describes how a combined approach of macro-mech. tests, multi-scale modeling, nano-mech. tests, and high pressure expts. and simulations have progressively helped to improve our understanding of MgO mech. behavior and elementary dislocation-based processes under stress.
- 42Becke, A. D. A New Mixing of Hartree-Fock and Local Density Functional Theories. J. Chem. Phys. 1993, 98, 1372– 1377, DOI: 10.1063/1.464304[Crossref], [CAS], Google Scholar42https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK3sXhtlagt7o%253D&md5=02a9289532197e7445af684bb29f4e11A new mixing of Hartree-Fock and local-density-functional theoriesBecke, Axel D.Journal of Chemical Physics (1993), 98 (2), 1372-7CODEN: JCPSA6; ISSN:0021-9606.Previous attempts to combine the Hartree-Fock theory with the local d.-functional theory were unsuccessful in applications to mol. bonding. A new coupling is presented of these two theories that maintains their simplicity and computational efficiency, and yet greatly improves their predictive power. Very encouraging results of tests on atomization energies, ionization potentials, and proton affinities are reported, and the potential for future development is discussed.
- 43Lee, C.; Yang, W.; Parr, R. G. Development of the Colle-Salvetti Correlation-Energy Formula into a Functional of the Electron Density. Phys. Rev. B 1988, 37, 785– 789, DOI: 10.1103/PhysRevB.37.785[Crossref], [PubMed], [CAS], Google Scholar43https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaL1cXktFWrtbw%253D&md5=ee7b59267a2ff72e15171a481819ccf8Development of the Colle-Salvetti correlation-energy formula into a functional of the electron densityLee, Chengteh; Yang, Weitao; Parr, Robert G.Physical Review B: Condensed Matter and Materials Physics (1988), 37 (2), 785-9CODEN: PRBMDO; ISSN:0163-1829.A correlation-energy formula due to R. Colle and D. Salvetti (1975), in which the correlation energy d. is expressed in terms of the electron d. and a Laplacian of the 2nd-order Hartree-Fock d. matrix, is restated as a formula involving the d. and local kinetic-energy d. On insertion of gradient expansions for the local kinetic-energy d., d.-functional formulas for the correlation energy and correlation potential are then obtained. Through numerical calcns. on a no. of atoms, pos. ions, and mols., of both open- and closed-shell type, it is demonstrated that these formulas, like the original Colle-Salvetti formulas, give correlation energies within a few percent.
- 44Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Scalmani, G.; Barone, V.; Mennucci, B.; Petersson, G. A.; Nakatsuji, H.; Caricato, M.; Li, X.; Hratchian, H. P.; Izmaylov, A. F.; Bloino, J.; Zheng, G.; Sonnenberg, J. L.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Vreven, T.; Montgomery, J. A., Jr.; Peralta, J. E.; Ogliaro, F.; Bearpark, M.; Heyd, J. J.; Brothers, E.; Kudin, K. N.; Staroverov, V. N.; Kobayashi, R.; Normand, J.; Raghavachari, K.; Rendell, A.; Burant, J. C.; Iyengar, S. S.; Tomasi, J.; Cossi, M.; Rega, N.; Millam, J. M.; Klene, M.; Knox, J. E.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Martin, R. L.; Morokuma, K.; Zakrzewski, V. G.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Dapprich, S.; Daniels, A. D.; Farkas, Ã.; Foresman, J. B.; Ortiz, J. V.; Cioslowski, J.; Fox, D. J. Gaussian 09 , Revision A.02, 2009.Google ScholarThere is no corresponding record for this reference.
- 45Pye, C. C.; Rudolph, W. W. An Ab Initio and Raman Investigation of Magnesium(II) Hydration. J. Phys. Chem. A 1998, 102, 9933– 9943, DOI: 10.1021/jp982709m[ACS Full Text
], [CAS], Google Scholar
45https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1cXntVKntrg%253D&md5=a8f8d76e99b18342f8a0bd0ef0789569An ab Initio and Raman Investigation of Magnesium(II) HydrationPye, Cory C.; Rudolph, W. W.Journal of Physical Chemistry A (1998), 102 (48), 9933-9943CODEN: JPCAFH; ISSN:1089-5639. (American Chemical Society)The weak polarized Raman band assigned to the ν1-MgO6 mode of the hexaaquo Mg(II) ion was studied over the temp. range 25 to 125°. The 356 cm-1 stretching mode frequency decreases by ∼3 cm-1 but broadens by 13 cm-1 over a 100° temp. range. A depolarized mode at 235 cm-1 could be assigned to ν2. Probably the hexaaquo Mg(II) ion is thermodynamically stable in perchlorate and chloride solns. In sulfate solns., an equil. exists between the hexaaquo ion and an inner-sphere sulfato complex. Ab initio geometry optimizations of Mg(H2O)62+ were carried out at the Hartree-Fock and Moller-Plesset levels of theory, using various basis sets up to 6-31+G*. Frequency calcns. confirm that the Th structure is a min. The unscaled frequencies of the MgO6 unit are lower than the exptl. frequencies, and scaling only marginally improves the agreement. The theor. binding enthalpy for the hexaaquo Mg(II) ion accounts for ∼70% of the exptl. hydration energy of Mg(II). A comparison of 3 models for the 2nd hydration sphere is presented, and the most suitable is one of lower symmetry T, in which alternate faces of the MgO6 octahedron are H-bonded to H2O trimers. The unscaled Hartree-Fock frequencies agree very well with exptl. observations, giving nearly exact agreement with expt. - 46Matwiyoff, N. A.; Taube, H. Direct Determination of the Solvation Number of Magnesium(II) ion in water, Aqueous Acetone, and Methanolic Acetone solutions. J. Am. Chem. Soc. 1968, 90, 2796– 2800, DOI: 10.1021/ja01013a012[ACS Full Text
], [CAS], Google Scholar
46https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaF1cXktFegtb8%253D&md5=a2fd838ec5de7ecba4e9ef57295cc10fDirect determination of the solvation number of magnesium(II) ion in water, aqueous acetone, and methanolic acetone solutionsMatwiyoff, N. A.; Taube, H.Journal of the American Chemical Society (1968), 90 (11), 2796-800CODEN: JACSAT; ISSN:0002-7863.At temps. below -60°, the proton magnetic resonance (pmr) signals of the solvent mols. within the primary coordination sphere of the Mg2+ ion in aq. acetone, methanolic acetone, and concd. aq. solns. can be distinguished from those of the bulk solvent. From a comparison of the areas of the pmr lines of the solvent in the free and coordinated sites, the compn. of the primary solvation sphere of the Mg2+ ion in these solvents was Mg(MeOH)62+ in methanolic acetone and Mg(OH2)62+ in aq. acetone and H2O. The relative coalescence temps. of the coordinated and free solvent pmr signals indicate that the order of increasing lability of the complex ions in Mg(MeOH)62+ < Mg(OH2)62+ in aq. acetone < Mg-(OH2)62+ in H2O. - 47Skipper, N. T.; Neilson, G. W.; Cummings, S. C. An X-ray Diffraction Study of Ni(aq)2+ and Mg(aq)2+ by Difference Methods. J. Phys.: Condensed Matter 1989, 1, 3489– 3506[Crossref], [CAS], Google Scholar47https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaL1MXkvVCqtbw%253D&md5=9868673476f5d4809cd1dc087ad4b7f4An x-ray diffraction study of aquated nickel(2+) and magnesium(2+) by difference methodsSkipper, N. T.; Neilson, G. W.; Cummings, S. C.Journal of Physics: Condensed Matter (1989), 1 (22), 3489-506CODEN: JCOMEL; ISSN:0953-8984.Difference methods of x-ray diffraction were used to study the microscopic structure around Ni[aq]2+ and Mg[aq]2+ in a variety of aq. solns. Ref. to the results of neutron diffraction expts. show that Ni[aq]2+ and Mg[aq]2+ can be regarded as structurally isomorphic species, thereby enabling the local ionic structure to be measured in terms of the cation-oxygen and cation-cation radial pair distribution functions. Results are included for the dependence of these functions on concn., counter-ion species and the interchange of light and heavy water as the solvent.
- 48Bernal-Uruchurtu, M. I.; Ortega-Blake, I. A Refined Monte Carlo Study of Mg2+ and Ca2+ Hydration. J. Chem. Phys. 1995, 103, 1588– 1598, DOI: 10.1063/1.469781[Crossref], [CAS], Google Scholar48https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK2MXntFWltbg%253D&md5=4800a4c0a1e7999d6eda6da12dd3e7ddA refined Monte Carlo study of Mg2+ and Ca2+ hydrationBernal-Uruchurtu, M. I.; Ortega-Blake, I.Journal of Chemical Physics (1995), 103 (4), 1588-98CODEN: JCPSA6; ISSN:0021-9606. (American Institute of Physics)The interaction potential used includes polarization and non-additivity factors that have been reported to be crit. for the proper description of hydration. The effect of cell size, amt. of configurations needed to attain equil., and size of the statistical sample are studied. A microscopic anal. of the hydration shows that Mg2+ and its first shell can be considered as a supermol. embedded in the solvent. For Ca2+ this character is less marked and its first shell responds to the solvent more easily. The coordination properties of both ions are discussed. The differences in the coordination properties of both ions are due to a great extent to the differences in the water depletion zone beyond the first hydration shell. The contributions of each hydration shell to the total enthalpy of hydration are analyzed as well as the local densities related to the electrostriction.
- 49Obst, S.; Bradaczek, H. Molecular Dynamics Study of the Structure and Dynamics of the Hydration Shell of Alkaline and Alkaline-Earth Metal Cations. J. Phys. Chem. 1996, 100, 15677– 15687, DOI: 10.1021/jp961384b[ACS Full Text
], [CAS], Google Scholar
49https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK28XlsVWitbY%253D&md5=417f2edcd0ab07d163e630dad0af9cb3Molecular Dynamics Study of the Structure and Dynamics of the Hydration Shell of Alkali and Alkaline-Earth Metal CationsObst, Stefan; Bradaczek, HansJournal of Physical Chemistry (1996), 100 (39), 15677-15687CODEN: JPCHAX; ISSN:0022-3654. (American Chemical Society)Mol.-dynamics simulations of hydrated alkali and alk. earth metal cations at room temp. (T = 300 K) were carried out by using the CHARMM22 force field. Dynamic and static properties of systems contg. one ion and 123 or 525 water mols. were investigated by anal. of trajectories of 1 ns duration and compared to exptl. and theor. results. In addn., the size and the direction of the elementary motions of both the ions and the water mols. were investigated on the scale of the integration time step of 1 fs. Comparison between systems of different size revealed that for the larger system the diffusion coeff. and the no. of hydrogen bonds were increased. Radial pair distribution functions and coordination nos. are in good agreement with x-ray and neutron scattering data. The diffusion coeff. D of bulk TIP3P water in a system with 528 water mols. was by one-fourth higher than the exptl. value. Minor differences of approx. 10% between exptl. and simulated diffusion coeffs. were found for Li+, Na+, K+, and Mg2+. On the other hand, D was underestimated by the simulation for Ca2+ and Sr2+ by as much as 30%. On the av., 2.9 hydrogen bonds per bulk water mol. were found. The obsd. order of residence times for the monovalent ions, τ(Li+) > τ(Na+) > τ(K+), is in good agreement with the literature. Although τ was expected to increase with decreasing mass of the ion, the exchange of water mols. from the solvation shell of Mg2+ occurred much faster than for Ca2+. - 50Tongraar, A.; Michael Rode, B. The Role of Non-Additive Contributions on the Hydration Shell Structure of Mg2+ Studied by Born-Oppenheimer Ab Initio Quantum Mechanical/Molecular Mechanical Molecular Dynamics Simulation. Chem. Phys. Lett. 2001, 346, 485– 491, DOI: 10.1016/S0009-2614(01)00923-X[Crossref], [CAS], Google Scholar50https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3MXnsVegsbw%253D&md5=325dccd3d7ea9019dc8a32599842c597The role of non-additive contributions on the hydration shell structure of Mg2+ studied by Born-Oppenheimer ab initio quantum mechanical/molecular mechanical molecular dynamics simulationTongraar, A.; Michael Rode, B.Chemical Physics Letters (2001), 346 (5,6), 485-491CODEN: CHPLBC; ISSN:0009-2614. (Elsevier Science B.V.)An ab initio quantum mech./mol. mech. (QM/MM) mol. dynamics simulation has been performed to investigate the effects of non-additive contributions on the hydration shell structure of Mg2+. The active-site region, the sphere including the second hydration shell of Mg2+, was treated by Born-Oppenheimer ab initio quantum mechanics, while the rest is described by classical pair potentials. A hydration complex with six inner shell waters and 12 s shell waters was obsd. It was also found that the effects of non-additive terms play an important role in the preferential orientation of water mols. inside the hydration sphere of Mg2+.
- 51Tongraar, A.; Rode, B. M. Structural Arrangement and Dynamics of the Hydrated Mg2+: an Ab Initio QM/MM Molecular Dynamics Simulation. Chem. Phys. Lett. 2005, 409, 304– 309, DOI: 10.1016/j.cplett.2005.04.062[Crossref], [CAS], Google Scholar51https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2MXlt1GqsLo%253D&md5=eec92e744d82f634b28e421a2cb33f72Structural arrangement and dynamics of the hydrated Mg2+: An ab initio QM/MM molecular dynamics simulationTongraar, Anan; Rode, Bernd MichaelChemical Physics Letters (2005), 409 (4-6), 304-309CODEN: CHPLBC; ISSN:0009-2614. (Elsevier B.V.)The structural arrangement and dynamics of solvated Mg2+ in dil. aq. soln. have been studied by ab initio QM/MM mol. dynamics simulation, in which the whole first and most of the second hydration shell of the ion were treated at Hartree-Fock level using LANL2DZ basis sets. Besides the most stable Mg2+(H2O)6 species, intermediates such as Mg2+(H2O)5(H2O), where at least one water mol. temporarily moves into the inter-shell region but remains H-bonded to inner-shell water, as well as transition complexes of the Mg2+(H2O)6(H2O) type, exist in aq. soln. The dynamics of solvate and surrounding water mols. are discussed in connection to the structure-forming' ability of Mg2+.
- 52Dudev, T.; Lim, C. Incremental Binding Free Energies in Mg2+ Complexes: A DFT Study. J. Phys. Chem. A 1999, 103, 8093– 8100, DOI: 10.1021/jp991575p[ACS Full Text
], [CAS], Google Scholar
52https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1MXlvVGhs7w%253D&md5=4cb9ef20226ae5ca43dc2080db42737bIncremental Binding Free Energies in Mg2+ Complexes: A DFT StudyDudev, Todor; Lim, CarmayJournal of Physical Chemistry A (1999), 103 (40), 8093-8100CODEN: JPCAFH; ISSN:1089-5639. (American Chemical Society)D. functional theory has been employed to evaluate the incremental binding energies, enthalpies, entropies, and free energies for the reactions of Mg2+ with water, methanol, formamide, and formate. The B3LYP/6-31+G* calcns. on the Mg2+ complexes show that the metal ion can accommodate no more than three neg. charged formates. For the neutral-ligand complexes, magnesium prefers to bind to methanol and formamide rather than water when the no. of ligands is less than four, but it prefers water to methanol and formamide for complexes with five or six ligands. These results have been rationalized in terms of steric crowding of the ligands around the metal ion and charge transfer from the ligand(s) to Mg2+. These two factors result in attenuation of the Mg-O bond distance and, hence, redn. in the electrostatic and polarization energies, which dominate the incremental binding energy. An empirical scheme, employing the incremental binding energies for Mg2+-single-type-ligand complexes, has been developed to accurately predict the total binding energy of Mg2+-mixed-ligand clusters. - 53D’Angelo, P.; Migliorati, V.; Sessa, F.; Mancini, G.; Persson, I. XANES Reveals the Flexible Nature of Hydrated Strontium in Aqueous Solution. J. Phys. Chem. B 2016, 120, 4114– 4124, DOI: 10.1021/acs.jpcb.6b01054[ACS Full Text
], [CAS], Google Scholar
53https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC28XlvVyqt7o%253D&md5=7bf9ff7a97f8f2e807c1d8745ed1d9ddXANES Reveals the Flexible Nature of Hydrated Strontium in Aqueous SolutionD'Angelo, Paola; Migliorati, Valentina; Sessa, Francesco; Mancini, Giordano; Persson, IngmarJournal of Physical Chemistry B (2016), 120 (17), 4114-4124CODEN: JPCBFK; ISSN:1520-5207. (American Chemical Society)X-ray absorption near-edge structure (XANES) spectroscopy has been used to det. the structure of the hydrated strontium in aq. soln. The XANES anal. has been carried out using solid [Sr(H2O)8](OH)2 as ref. model. Classical and Car-Parrinello mol. dynamics (MD) simulations have been carried out and in the former case two different sets of Lennard-Jones parameters have been used for the Sr2+ ion. The best performing theor. approach has been chosen on the basis of the exptl. results. XANES spectra have been calcd. starting from MD trajectories, without carrying out any minimization of the structural parameters. This procedure allowed us to properly account for thermal and structural fluctuations occurring in the aq. soln. in the anal. of the exptl. spectrum. A deconvolution procedure has been applied to the raw absorption data thus increasing the sensitivity of XANES spectroscopy. One of the classical MD simulations has been found to provide a XANES theor. spectrum in better agreement with the exptl. data. An 8-fold hydration complex with a Sr-O distance of 2.60 Å has been found to be compatible with the XANES data, in agreement with previous findings. However, the hydration shells of the strontium ions have been found to have a flexible nature with a fast ligand exchange rate between the first and second hydration shell occurring in the picosecond time scale. - 54Spezia, R.; Duvail, M.; Vitorge, P.; Cartailler, T.; Tortajada, J.; D’Angelo, P.; Gaigeot, M.-P.; Chillemi, G. A Coupled Car-Parrinello Molecular Dynamics and EXAFS Data Analysis Investigation of Aqueous Co2+. J. Phys. Chem. A 2006, 110, 13081– 13088, DOI: 10.1021/jp064688z[ACS Full Text
], [CAS], Google Scholar
54https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD28XhtFyntbfF&md5=a2ecd4561da2a702035dc3d5be397682A Coupled Car-Parrinello Molecular Dynamics and EXAFS Data Analysis Investigation of Aqueous Co2+Spezia, Riccardo; Duvail, Magali; Vitorge, Pierre; Cartailler, Thierry; Tortajada, Jeanine; Chillemi, Giovanni; D'Angelo, Paola; Gaigeot, Marie-PierreJournal of Physical Chemistry A (2006), 110 (48), 13081-13088CODEN: JPCAFH; ISSN:1089-5639. (American Chemical Society)We have studied the microscopic solvation structure of Co2+ in liq. water by means of d. functional theory (DFT)-based Car-Parrinello mol. dynamics (CPMD) simulations and extended X-ray absorption fine structure (EXAFS) data anal. The effect of the no. of explicit water mols. in the simulation box on the first and second hydration shell structures has been considered. Classical mol. dynamics simulations, using an effective two-body potential for Co2+-water interactions, were also performed to show box size effects in a larger range. We have found that the no. of explicit solvent mols. has a marginal role on the first solvation shell structural parameters, whereas larger boxes may be necessary to provide a better description of the second solvation shell. Car-Parrinello simulations were detd. to provide a reliable description of structural and dynamical properties of Co2+ in liq. water. In particular, they seem to describe both the first and second hydration shells correctly. The EXAFS signal was reconstructed from Car-Parrinello simulations. Good agreement between the theor. and exptl. signals was obsd., thus strengthening the microscopic picture of the Co2+ solvation properties obtained using first-principle simulations. - 55D’Angelo, P.; Roscioni, O. M.; Chillemi, G.; Della Longa, S.; Benfatto, M. Detection of Second Hydration Shells in Ionic Solutions by XANES: Computed Spectra for Ni2+ in Water Based on Molecular Dynamics. J. Am. Chem. Soc. 2006, 128, 1853– 1858, DOI: 10.1021/ja0562503[ACS Full Text
], [CAS], Google Scholar
55https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD28XntFCmtA%253D%253D&md5=6823dd3bb542c0e84bb5b780c98b1757Detection of Second Hydration Shells in Ionic Solutions by XANES: Computed Spectra for Ni2+ in Water Based on Molecular DynamicsD'Angelo, Paola; Roscioni, Otello Maria; Chillemi, Giovanni; Della Longa, Stefano; Benfatto, MaurizioJournal of the American Chemical Society (2006), 128 (6), 1853-1858CODEN: JACSAT; ISSN:0002-7863. (American Chemical Society)A general procedure to compute X-ray absorption near-edge structure (XANES) spectra within multiple-scattering theory starting from mol. dynamics (MD) structural data has been developed and applied to the study of a Ni2+ aq. soln. This method allows one to perform a quant. anal. of the XANES spectra of disordered systems using a proper description of the thermal and structural fluctuations. The XANES spectrum of Ni2+ in aq. soln. has been calcd. using the structural information obtained from the MD simulations without carrying out any minimization in the structural parameter space. A very good reprodn. of the exptl. data was obtained including the second-shell water mols. in the calcn., thus showing that the second hydration shell provides a detectable contribution to the XANES spectra of ionic solns. The anal. including the first-shell cluster only permitted us to quant. det. the effect of disorder on the amplitude of the XANES spectra for mol. complexes. These results simultaneously confirm the reliability of the procedure and the structural results obtained from MD simulations. The combination of MD and XANES is found to be very helpful to get important new insights into the quant. estn. of structural properties of disordered systems. - 56Radnai, T.; Kálmán, E.; Pollmer, K. X-Ray Diffraction Study of MgCl2 in Methanol. Zeitschrift fu̅r Naturforschung A 1984, 39, 464– 470, DOI: 10.1515/zna-1984-0508[Crossref], [CAS], Google Scholar56https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaL2cXkt12htLs%253D&md5=5f05e8b195bac6e674dee230b0212c8aX-ray diffraction study of magnesium chloride in methanolRadnai, T.; Kalman, E.; Pollmer, K.Zeitschrift fuer Naturforschung, Teil A: Physik, Physikalische Chemie, Kosmophysik (1984), 39A (5), 464-70CODEN: ZTAKDZ; ISSN:0340-4811.The structure of a concd. soln. of MgCl2 in methanol was studied by x-ray diffraction. The parameters for the ion-solvent interactions agree with those found in aq. solns. Both for Mg2+ and Cl-, the solvate shells are composed of 6 methanol mols. An av. octahedral arrangement of OH groups in the solvate shells of magnesium is probable. Octahedral sym. positions for CH3 groups proved to be unlikely.
- 57Nakamura, S.; Meiboom, S. Proton Magnetic Resonance Studies of the Solvation Shell of Mg2+ in Methanol. Solvation Number and Exchange Rate. J. Am. Chem. Soc. 1967, 89, 1765– 1772, DOI: 10.1021/ja00984a001[ACS Full Text
], [CAS], Google Scholar
57https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaF2sXht1SlsLg%253D&md5=330bf7c66f4ca1f0483fd94cd6ed560cProton magnetic resonance studies of the solvation shell of magnesium(II) in methanol. Solvation number and exchange rateNakamura, Shuzo; Meiboom, SaulJournal of the American Chemical Society (1967), 89 (8), 1765-72CODEN: JACSAT; ISSN:0002-7863.The exchange rate of MeOH mols. in the solvation shell of Mg++ in acidic anhyd. MeOH was detd. between -50 and 35° from the broadening of OH proton magnetic resonance signals of the free and bound MeOH. The CH3 signal of the coordinated MeOH, which was hidden behind the bulk CH3 line, can be observed by the addn. of Cu++ to the soln. From the temp. behavior of this signal, it can be concluded that ligand exchange, rather than simple OH-proton exchange, is the dominant process under the conditions of the expt. The first-order rate const. and activation parameters at 25° are: k = 4.7 × 103/sec., ΔH⧺ = 16.7 kcal mole-1, and ΔS⧺ = 14 entropy units. From relative intensity measurements of the signals at -80 and -19.2°, the solvation no. of the Mg++ was calcd. to be 6. Similar expts. with Li, Ca, Sr, and Ba perchlorates failed to show a sep. solvation-shell signal down to -110°. For these ions ligand exchange is apparently rapid down to that temp. - 58Faralli, C.; Pagliai, M.; Cardini, G.; Schettino, V. Ab Initio Molecular Dynamics Study of Mg2+ and Ca2+ Ions in Liquid Methanol. J. Chem. Th. Comp. 2008, 4, 156– 163, DOI: 10.1021/ct700209v[ACS Full Text
], [CAS], Google Scholar
58https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2sXhsVehtbjN&md5=2ffb1d3b67734d22cf4f24cd63cd8763Ab Initio Molecular Dynamics Study of Mg2+ and Ca2+ Ions in Liquid MethanolFaralli, Cristian; Pagliai, Marco; Cardini, Gianni; Schettino, VincenzoJournal of Chemical Theory and Computation (2008), 4 (1), 156-163CODEN: JCTCCE; ISSN:1549-9618. (American Chemical Society)Ab initio Car-Parrinello mol. dynamics simulations have been performed in order to investigate the solvation properties of Mg2+ and Ca2+ in fully deuterated methanol soln. to better understand polarization effects induced by the ions. Charge transfer and dipole moment calcns. have been performed to give more detailed insight on the role of the electronic reorganization and its effect on the first solvation shell stability. The perturbation of the methanol H-bond network has been investigated.
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Abstract
Figure 1
Figure 1. Evolution of the operando Mg K-edge AP-NEXAFS spectra upon MgO exposure to water (a) and methanol (b). Constant energy cuts are drawn at 1305.7 eV (yellow dotted lines) and at 1310.2 eV (gray dotted lines). The spectral scans recorded during the flux of water and methanol at 50 °C and during the subsequent flux interruption and temperature increase up to 250 °C are highlighted using green and purple backgrounds, respectively. In both panels, the AP-NEXAFS spectra recorded before the surface exposure to the given flux and at the temperature of 250 °C after flux interruption are evidenced in bold black lines.
Figure 2
Figure 2. (a) Intensity variation at 1305.7 eV (full yellow line) and at 1310.2 eV (full gray line) of the operando Mg K-edge XAS spectra measured upon MgO exposure to water vapor. The intensities of the starting XAS spectrum, of the XAS spectra recorded during the water flux at 50 °C, and of those measured during the water flux interruption and contemporary temperature increase are highlighted by black, green, and purple backgrounds, respectively. (b, c) Results of the decomposition of the Mg K-edge spectra. Extracted concentration profiles and Mg K-edge NEXAFS spectra (panels b and c, respectively). (d) Comparison between the NEXAFS spectrum of the Mg2+ intermediate species arising upon exposure of the MgO surface to water and the theoretical average Mg K-edge NEXAFS spectrum resulting from 500 MD snapshots of the fully hydrated Mg2+ ion (full indigo line).
Figure 3
Figure 3. Theoretical NEXAFS spectra (gray full lines) calculated from 500 MD snapshots of the Mg2+ ion in water at 50 °C and converged NEXAFS average (blue full line) of the 500 spectra (a) along with a selection of average NEXAFS spectra calculated with a variable number (N) of spectra (b). The associated evolutions of the total absolute differences between averages of spectra computed with increasing N values are shown in the insets of panel b. SN and SN* are the averages of N and N* spectra, respectively, with N* immediately preceding the given value of N in the evaluated sequence (e.g., N* = 250 if N = 500).
Figure 4
Figure 4. (a) Intensity variation at 1305.7 eV (full yellow line) and at 1310.2 eV (full gray line) of the operando Mg K-edge XAS spectra measured upon MgO exposure to methanol vapor. The intensities of the starting XAS spectrum, of the XAS spectra recorded during the methanol flux at 50 °C, and of those measured during the methanol flux interruption and contemporary temperature increase are highlighted by black, green, and purple backgrounds, respectively. (b, c) Results of the decomposition of the Mg K-edge spectroscopic data. Extracted concentration and Mg K-edge NEXAFS spectral profiles (panels b and c, respectively). (d) Comparison between the MCR-extracted AP-NEXAFS spectral component of the Mg2+ intermediate species arising upon exposure of the MgO surface to methanol and the theoretical average Mg K-edge NEXAFS spectrum resulting from 500 MD snapshots of the Mg2+ ion fully solvated by methanol molecules (full indigo line).
Figure 5
Figure 5. Pictorial representation of the main findings presented in this work, where it is evidenced that at 50 °C, a temperature-favored reversible hydration/solvation of Mg2+ ions occurs at the MgO surface, upon its sequential exposure to water (left) and methanol (right).
References
ARTICLE SECTIONSThis article references 58 other publications.
- 1Groß, A. Reactions at Surfaces studied by Ab Initio Dynamics Calculations. Surf. Sci. Rep. 1998, 32, 291– 340, DOI: 10.1016/S0167-5729(98)00008-9[Crossref], [CAS], Google Scholar1https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1cXnslOlt7s%253D&md5=4ccff3cf607d429f040a37d427fc1772Reactions at surfaces studied by ab initio dynamics calculationsGross, AxelSurface Science Reports (1998), 32 (8), 291-340CODEN: SSREDI; ISSN:0167-5729. (Elsevier Science B.V.)Owing to the development of efficient algorithms and the improvement of computer power it is now possible to map out potential energy surfaces (PESs) of reactions at surfaces in great detail. This achievement has been accompanied by an increased effort in the dynamical simulation of processes on surfaces. The paradigm for simple reactions at surfaces - the dissocn. of hydrogen on metal surfaces - can now be treated fully quantum dynamically in the mol. degrees of freedom from first principles, i.e., without invoking any adjustable parameters. This relatively new field of ab initio dynamics simulations of reactions at surfaces will be reviewed. Mainly the dissocn. of hydrogen on clean and adsorbate covered metal surfaces and on semiconductor surfaces will be discussed. In addn., the ab initio mol. dynamics treatment of reactions of hydrogen atoms with hydrogen-passivated semiconductor surfaces and recent achievements in the ab initio description of laser-induced desorption and further developments will be addressed.
- 2Brown, G. E.; Henrich, V. E.; Casey, W. H.; Clark, D. L.; Eggleston, C.; Felmy, A.; Goodman, D. W.; Grätzel, M.; Maciel, G.; McCarthy, M. I.; Nealson, K. H.; Sverjensky, D. A.; Toney, M. F.; Zachara, J. M. Metal Oxide Surfaces and Their Interactions with Aqueous Solutions and Microbial Organisms. Chem. Rev. 1999, 99, 77– 174, DOI: 10.1021/cr980011z[ACS Full Text
], [CAS], Google Scholar
2https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1cXotFaju78%253D&md5=ca7dd477811849283f4096ab04e025abMetal Oxide Surfaces and Their Interactions with Aqueous Solutions and Microbial OrganismsBrown, Gordon E., Jr.; Henrich, Victor E.; Casey, William H.; Clark, David L.; Eggleston, Carrick; Felmy, Andrew; Goodman, D. Wayne; Graetzel, Michael; Maciel, Gary; McCarthy, Maureen I.; Nealson, Kenneth H.; Sverjensky, Dimitri A.; Toney, Michael F.; Zachara, John M.Chemical Reviews (Washington, D. C.) (1999), 99 (1), 77-174CODEN: CHREAY; ISSN:0009-2665. (American Chemical Society)A review with 825 refs. concerning the state of knowledge of metal oxide surfaces and their interactions with aq. solns. and microorganisms highlighting scientific and technol. contexts where this knowledge is needed and evaluating exptl. and theor. techniques needed to obtain the necessary information is given. Topics discussed include: characterization of clean metal oxide surfaces; water vapor-metal oxide interactions; aq. soln.-metal oxide interfaces; dissoln. and growth of metal (hydr)oxides; biotic processes in metal oxide surface chem.; theory; and challenges and future directions. - 3Carrasco, E.; Brown, M. A.; Sterrer, M.; Freund, H.-J.; Kwapien, K.; Sierka, M.; Sauer, J. Thickness-Dependent Hydroxylation of MgO(001) Thin Films. J. Phys. Chem. C 2010, 114, 18207– 18214, DOI: 10.1021/jp105294e[ACS Full Text
], [CAS], Google Scholar
3https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC3cXht1CmtL7P&md5=0d1dc8c024d2ff8094da7e1e9df6aa70Thickness-Dependent Hydroxylation of MgO(001) Thin FilmsCarrasco, Esther; Brown, Matthew A.; Sterrer, Martin; Freund, Hans-Joachim; Kwapien, Karolina; Sierka, Marek; Sauer, JoachimJournal of Physical Chemistry C (2010), 114 (42), 18207-18214CODEN: JPCCCK; ISSN:1932-7447. (American Chemical Society)Hydroxylation of MgO surfaces has been studied from UHV to mbar pressure for MgO(001) films of different thickness grown on Ag(001) by XPS, IR reflection absorption spectroscopy, and d. functional theory calcns. In agreement with earlier studies on MgO(001) single crystals, a threshold water pressure on the order of 10-4 mbar is found for extensive hydroxylation of thick, bulklike MgO films. Decreasing the MgO film thickness shifts the threshold pressure to lower values, being 10-6 mbar in the limit of 2 monolayer MgO(001)/Ag(001). This result is explained on the basis of the precursor state of periclase MgO(001) dissoln. involving hydrolysis of Mg-O surface bonds. The enhanced structural flexibility (polaronic distortion) of the ultrathin MgO film facilitates surface hydroxylation by lowering the barrier for hydrolysis. - 4Verdaguer, A.; Sacha, G. M.; Bluhm, H.; Salmeron, M. Molecular Structure of Water at Interfaces: Wetting at the Nanometer Scale. Chem. Rev. 2006, 106, 1478– 1510, DOI: 10.1021/cr040376l[ACS Full Text
], [CAS], Google Scholar
4https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD28XivFWmur4%253D&md5=61d2a5eeab518fc927018d85abca4ef7Molecular structure of water at interfaces: Wetting at the nanometer scaleVerdaguer, A.; Sacha, G. M.; Bluhm, H.; Salmeron, M.Chemical Reviews (Washington, DC, United States) (2006), 106 (4), 1478-1510CODEN: CHREAY; ISSN:0009-2665. (American Chemical Society)A review. A review on recent studies on the structure and growth of water films at interfaces. The structure of water films at cryogenic temps. and at ambient conditions, water/vapor interface, water confined between flat mica surfaces, anal. of the layering structure of water using at. force microscopy, water layers on metals, structure of the water monolayer, and the effect of elec. fields on the formation of water necks are discussed. - 5Ewing, G. E. Ambient Thin Film Water on Insulator Surfaces. Chem. Rev. 2006, 106, 1511– 1526, DOI: 10.1021/cr040369x[ACS Full Text
], [CAS], Google Scholar
5https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD28XivVemu78%253D&md5=c6e44bb864522e3dfee0bd70069c0c60Ambient thin film water on insulator surfacesEwing, George E.Chemical Reviews (Washington, DC, United States) (2006), 106 (4), 1511-1526CODEN: CHREAY; ISSN:0009-2665. (American Chemical Society)A review. A review describes the methods for studying thin film water and their properties, and presents some insulator systems of ambient thin film water. - 6Woodruff, D. P. Quantitative Structural Studies of Corundum and Rocksalt Oxide Surfaces. Chem. Rev. 2013, 113, 3863– 3886, DOI: 10.1021/cr3002998[ACS Full Text
], [CAS], Google Scholar
6https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC3sXktV2iug%253D%253D&md5=92a058e31a61539b4baad00b0e94b416Quantitative Structural Studies Of Corundum and Rocksalt Oxide SurfacesWoodruff, D. PhillipChemical Reviews (Washington, DC, United States) (2013), 113 (6), 3863-3886CODEN: CHREAY; ISSN:0009-2665. (American Chemical Society)A review. Topics discussed include: surface of corundum-phase solids such as aluminum oxide, chromium oxide, iron oxides, vanadium oxide and adsorbate structure; and rocksalt structure oxide surface such surface of magnesia and nickel oxide. - 7Anderson, P. J.; Horlock, R. F.; Oliver, J. F. Interaction of Water with the Magnesium Oxide Surface. Trans. Faraday Soc. 1965, 61, 2754– 2762, DOI: 10.1039/tf9656102754[Crossref], [CAS], Google Scholar7https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaF28XkslOntA%253D%253D&md5=e4d82c4467ab9b0c1645bf64f46663ccInteraction of water with the magnesium oxide surfaceAnderson, P. J.; Horlock, R. F.; Oliver, J. F.Transactions of the Faraday Society (1965), 61 (12), 2754-62CODEN: TFSOA4; ISSN:0014-7672.The study illustrates the complexities of the processes involved and the marked dependence upon the previous history of the oxide. Thus, MgO, prepd. by decompn. of the hydroxide at >300° and held at 300° in vacuo for >5 hrs., retains H2O corresponding to a surface coverage σ ∼0.08 mol/A.2 An addnl. 0.1 mol/A.2 is adsorbed at room temp. and a relative pressure of 0.01. Subsequent desorption by prolonged pumping at a series of temps. yields steady-state values. A discontinuity at 250° with σ ∼0.1 suggests the existence of 2 distinct forms of adsorbed H2O, tentatively regarded as chemisorption (above 250°) and a rather strongly bound physisorption which is not completely removed on pumping below 200°. The ease with which desorption is accomplished is markedly dependent on the time during which adsorbed H2O is present on the sample, suggesting a slow conversion at room temp. to a more strongly bound state. These expts. plus ir data allow the conclusion that a surface, not previously dehydrated, is covered with surface hydroxyl groups at ∼0.11 mol/A.2 Further adsorption is in the form of mol. H2O. This value of σ, corresponding to surface satn., indicates that the relevant surface is the (100) face. The simplest model for H2O chemisorption on this face suggests OH groups in 2 different configurations. Desorption would then occur by interaction of a pair of adjacent OH groups, one of each type. The ir detns. support this model.
- 8Imad-Uddin Ahmed, S.; Perry, S. S.; El-Bjeirami, O. Desorption and Reaction of Water on MgO(100) Studied as a Function of Surface Preparation. J. Phys. Chem. B 2000, 104, 3343– 3348, DOI: 10.1021/jp9934275
- 9Johnson, M. A.; Stefanovich, E. V.; Truong, T. N.; Günster, J.; Goodman, D. W. Dissociation of Water at the MgO(100)–Water Interface: Comparison of Theory with Experiment. J. Phys. Chem. B 1999, 103, 3391– 3398, DOI: 10.1021/jp983729r[ACS Full Text
], [CAS], Google Scholar
9https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1MXit1Wjsrk%253D&md5=12f947a6a045f8f665a16fb37a551c67Dissociation of Water at the MgO(100)-Water Interface: Comparison of Theory with ExperimentJohnson, Michael A.; Stefanovich, Eugene V.; Truong, Thanh N.; Guenster, Jens; Goodman, D. W.Journal of Physical Chemistry B (1999), 103 (17), 3391-3398CODEN: JPCBFK; ISSN:1089-5647. (American Chemical Society)Dissociative chemisorption of H2O at the MgO(100)-water interface has been investigated both exptl. and theor. In particular, metastable impact electron spectroscopy (MIES) was used to image the d. of occupied states on the MgO(100)/Mo(100) surface for various degrees of water exposure. After multilayer water desorption, spectral features typical of surface hydroxyls are present. To further study the possibility of dissociative chemisorption of water, a theor. and computational method called CECILIA (combined embedded cluster at the interface with liq. approach) was used to calc. the geometry, energetics, and electronic d. of states (DOS) for interfacial species. Consistent with expt., our theor. results predict that dissociative adsorption of H2O at the MgO(100)-water interface is energetically more favorable than mol. adsorption. The stabilization of charged OH- and H+ interface adsorbates is due to polarization of the surrounding solvent. - 10Giordano, L.; Goniakowski, J.; Suzanne, J. Partial Dissociation of Water Molecules in the (3 × 2) Water Monolayer Deposited on the MgO (100) Surface. Phys. Rev. Lett. 1998, 81, 1271– 1273, DOI: 10.1103/PhysRevLett.81.1271[Crossref], [CAS], Google Scholar10https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1cXltVSrtb8%253D&md5=14dae5836bf63c4e17600cbd6f7b2eadPartial Dissociation of Water Molecules in the (3×2) Water Monolayer Deposited on the MgO(100) SurfaceGiordano, Livia; Goniakowski, Jacek; Suzanne, JeanPhysical Review Letters (1998), 81 (6), 1271-1273CODEN: PRLTAO; ISSN:0031-9007. (American Physical Society)Using the ab initio total energy method based on the gradient-cor. local d. approxn. the authors have modeled the exptl. obsd. (3×2) H2O monolayer on the MgO (100) surface. The lateral interactions between the adsorbed H2O mols., the formation of H bonds, and the resulting strong dimerization of the adsorbate promote the dissocn. of 2 out of 6 H2O mols. in the surface unit cell. Although, on the theor. grounds, H2O dissocn. on a defective MgO surface was already reported, this is the 1st theor. evidence of H2O dissocn. on the perfect MgO (100) surface.
- 11Odelius, M. Mixed Molecular and Dissociative Water Adsorption on MgO [100]. Phys. Rev. Lett. 1999, 82, 3919– 3922, DOI: 10.1103/PhysRevLett.82.3919[Crossref], [CAS], Google Scholar11https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1MXjtF2gtrs%253D&md5=2890380f637997c346c22aa1301dd82aMixed Molecular and Dissociative Water Adsorption on MgO[100]Odelius, MichaelPhysical Review Letters (1999), 82 (19), 3919-3922CODEN: PRLTAO; ISSN:0031-9007. (American Physical Society)First principles mol. dynamics (MD) simulations, of H2O adsorption on the MgO[100] surface, was performed to det. the mol. structure and chem. nature of the adsorbed H2O at varying coverage. Dissociative adsorption was stabilized by hydrogen bond donation from neighboring H2O mols. The dissocn. barrier had a strong dependence on coverage. Spontaneous dissocn. was obsd. in picosecond MD simulations >1/2 monolayer (ML) coverage. Ordered structures with c[3×2] symmetry were examd. at 2/3 and 1 ML coverage. The ordered c[3×2] phase consisted of a mixt. of dissocd. and mol. adsorbed mols.
- 12Delle Site, L.; Alavi, A.; Lynden-Bell, R. M. The Structure and Spectroscopy of Monolayers of Water on MgO: an Ab Initio Study. J. Chem. Phys. 2000, 113, 3344– 3350, DOI: 10.1063/1.1287276[Crossref], [CAS], Google Scholar12https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3cXlslKktrk%253D&md5=50a177670033a1d385bda8c4e545d3d0The structure and spectroscopy of monolayers of water on MgO. An ab initio studyDelle Site, L.; Alavi, A.; Lynden-Bell, R. M.Journal of Chemical Physics (2000), 113 (8), 3344-3350CODEN: JCPSA6; ISSN:0021-9606. (American Institute of Physics)The structure and energetics of a monolayer of water on a perfect MgO substrate is investigated by ab initio calcns. Several min. in the potential energy surface were found including both physisorbed and chemisorbed states in which one third of the water mols. were dissocd. In the more stable of the physisorbed states, the water mols. were not all parallel to the surface, but some showed hydrogen bonding with surface O ions. Even in the physisorbed state, the geometry of these surface H-bonded water mols. were distorted relative to the bulk. One of the stable chemisorbed states was the same as that found in earlier work by Giordano et al. [Phys. Rev. Lett. 81, 1271 (1998)]. Two more stable chemisorbed structures were found in which strong H-bonds to the hydroxide ions in the water layer were formed. The existence of different min. appears to be the result of a subtle interplay between H-bonding between adsorbed species and with the surface oxide ions. Harmonic vibrational frequencies were detd. for both a chemisorbed and a physisorbed states and spectroscopic features which should discriminate between chemisorbed and physisorbed states are identified.
- 13Jug, K.; Heidberg, B.; Bredow, T. Cyclic Cluster Study of Water Adsorption Structures on the MgO(100) Surface. Surf. Sci. 2007, 601, 1529– 1535, DOI: 10.1016/j.susc.2006.12.092[Crossref], [CAS], Google Scholar13https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2sXjtVWrurs%253D&md5=091d22ecfaa300a853eea461fbb9da88Cyclic cluster study of water adsorption structures on the MgO(100) surfaceJug, Karl; Heidberg, Bettina; Bredow, ThomasSurface Science (2007), 601 (6), 1529-1535CODEN: SUSCAS; ISSN:0039-6028. (Elsevier B.V.)Cyclic cluster calcns. were performed with the quantum chem. method MSINDO to elucidate the relative stabilities of c(4 × 2), p(3 × 2) and (1 × 1) overlayer structures of water mols. on the MgO(1 0 0) surface. For the c(4 × 2) and p(3 × 2) structures both mol. adsorption and partially dissocd. adsorption were considered. In agreement with earlier theor. studies partial dissocn. was found to be more stable than mol. adsorption. For the c(4 × 2) structure both monolayer and double layer coverage were studied. Adsorption was found to be more stabilized with increasing degree of dissocn. until 50% of the water mols. were dissocd. In the case of 50% dissocd. water mols. we found that one quarter of the Mg atoms were pulled out of the MgO surface when surface relaxation was taken into account. A new structure for the fully dissocd. (1 × 1) water monolayer was found which is considerably more stable than previously studied arrangements. In all cases surface relaxation was found to be important. The most stable structures of c(4 × 2), p(3 × 2) and (1 × 1) symmetry have adsorption energies which differ by no more than 13 kJ/mol. This offers an explanation of phase transitions of overlayer structures found by expts. between 180 and 300 K.
- 14Lynden-Bell, R.; Delle Site, L.; Alavi, A. Structures of Adsorbed Water Layers on MgO: an Ab Initio Study. Surf. Sci. 2002, 496, L1– L6, DOI: 10.1016/S0039-6028(01)01669-7[Crossref], [CAS], Google Scholar14https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3MXptFCmsLo%253D&md5=299a663086409c99ffda792ee2003f9dStructures of adsorbed water layers on MgO. An ab initio studyLynden-Bell, R. M.; Delle Site, L.; Alavi, A.Surface Science (2002), 496 (1-2), L1-L6CODEN: SUSCAS; ISSN:0039-6028. (Elsevier Science B.V.)A systematic search using an ab initio d.-functional method was carried out for energy min. for a monolayer of water on MgO. Min. were sought in which one third of the water mols. were dissocd., and the obsd. p(3×2) symmetry satisfied. Six such min. were found, 3 of which are within 300kB per water mol. of the lowest energy structure. We also found a structure with a similar energy with (2×2) symmetry and half the water mols. dissocd. The structures are stabilized by the donation of 3 H-bonds to each hydroxide ion.
- 15Jug, K.; Heidberg, B.; Bredow, T. Molecular Dynamics Study of Water Adsorption Structures on the MgO(100) Surface. J. Phys. Chem. C 2007, 111, 6846– 6851, DOI: 10.1021/jp067651n[ACS Full Text
], [CAS], Google Scholar
15https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2sXktFynt70%253D&md5=f4c597d9925f6bb7666a299035d1825bMolecular Dynamics Study of Water Adsorption Structures on the MgO(100) SurfaceJug, Karl; Heidberg, Bettina; Bredow, ThomasJournal of Physical Chemistry C (2007), 111 (18), 6846-6851CODEN: JPCCCK; ISSN:1932-7447. (American Chemical Society)Semiempirical MSINDO calcns. were performed for the study of structure and stability of c(4 × 2), p(3 × 2), and (1 × 1) overlayers of H2O on the MgO(100) surface. Born-Oppenheimer mol. dynamics (MD) techniques were used to simulate the changes in the adsorption at 300 K compared to that at 0 K. A partially dissocd. double layer of the c(4 × 2) structure with coverage θ = 3/2 attacks the MgO surface at 300 K. The hydroxylated (1 × 1) overlayer structure appears to be equally aggressive toward the MgO surface at this temp. Nucleation for the process of Mg(OH)2 formation was also obsd. - 16Ončák, M.; Włlodarczyk, R.; Sauer, J. Water on the MgO(001) Surface: Surface Reconstruction and Ion Solvation. J. Phys. Chem. Lett. 2015, 6, 2310– 2314, DOI: 10.1021/acs.jpclett.5b00885[ACS Full Text
], [CAS], Google Scholar
16https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC2MXps1akur8%253D&md5=0baf86910c00e2eae193468bf1a84639Water on the MgO(001) Surface: Surface Reconstruction and Ion SolvationOncak, Milan; Wlodarczyk, Radoslaw; Sauer, JoachimJournal of Physical Chemistry Letters (2015), 6 (12), 2310-2314CODEN: JPCLCD; ISSN:1948-7185. (American Chemical Society)The interaction of water with the MgO(001) surface under ambient conditions is investigated by d. functional theory combined with statistical thermodn. For water loadings of more than one monolayer, we show that the std. structure model, a fully hydroxylated surface, needs to be revised. Reconstructed surfaces, involving hydrated/hydroxylated Mg2+ ions above the surface, are more stable. These findings provide a consistent picture for surface hydroxylation between low and high water coverage that is in agreement with available XPS data. - 17Akabayov, B.; Doonan, C. J.; Pickering, I. J.; George, G. N.; Sagi, I. Using Softer X-ray Absorption Spectroscopy to Probe Biological Systems. J. Synchr. Rad. 2005, 12, 392– 401, DOI: 10.1107/S0909049505010150[Crossref], [PubMed], [CAS], Google Scholar17https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2MXltlCns7w%253D&md5=3a58ddbc51c9a6a125d72b7ba4ff0d43Using softer X-ray absorption spectroscopy to probe biological systemsAkabayov, Barak; Doonan, Christian J.; Pickering, Ingrid J.; George, Graham N.; Sagi, IritJournal of Synchrotron Radiation (2005), 12 (4), 392-401CODEN: JSYRES; ISSN:0909-0495. (Blackwell Publishing Ltd.)Many inorg. species are now recognized as being essential for life, including many forms of sulfur, phosphate and numerous classes of metal ions. For example, recent progress in the fields of biochem. and biol. has pointed out the crit. importance of sulfur in the biosynthesis of vital cofactors and active sites in proteins, and in the complex reaction mechanisms often involved. Special attention has also been drawn to the diverse roles of alk. (Na+, K+) and alk. earth (Mg2+, Ca2+) metal ions in mediating the activity of RNA, proteins and many processes in living cells. While the general effect of these ions in biol. is mostly understood, information on their detailed role is deficient. Here the application of softer x-ray absorption spectroscopy (XAS) to probe the local structural and electronic environment of such ions within their biol. complexes and during physiol. reactions is discussed. In addn., the required exptl. set-up and the difficulties assocd. with conducting softer XAS expts. on biol. samples are presented.
- 18Capocasa, G.; Sessa, F.; Tavani, F.; Monte, M.; Olivo, G.; Pascarelli, S.; Lanzalunga, O.; Di Stefano, S.; D’Angelo, P. Coupled X-ray Absorption/UV-vis Monitoring of Fast Oxidation Reactions Involving a Nonheme Iron-Oxo Complex. J. Am. Chem. Soc. 2019, 141, 2299– 2304, DOI: 10.1021/jacs.8b08687[ACS Full Text
], [CAS], Google Scholar
18https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1MXht1ansr4%253D&md5=f3e41d41a49eae461da02fcf69e5b404Coupled X-ray Absorption/UV-vis Monitoring of Fast Oxidation Reactions Involving a Nonheme Iron-Oxo ComplexCapocasa, Giorgio; Sessa, Francesco; Tavani, Francesco; Monte, Manuel; Olivo, Giorgio; Pascarelli, Sakura; Lanzalunga, Osvaldo; Di Stefano, Stefano; D'Angelo, PaolaJournal of the American Chemical Society (2019), 141 (6), 2299-2304CODEN: JACSAT; ISSN:0002-7863. (American Chemical Society)Time-resolved X-ray absorption (XAS) and UV-vis spectroscopies with millisecond resoln. are used simultaneously to investigate oxidn. reactions of org. substrates by nonheme iron activated species. In particular, the oxidn. processes of arylsulfides and benzyl alcs. by a nonheme iron-oxo complex have been studied. We show for the first time that the pseudo-first-order rate consts. of fast bimol. processes in soln. (milliseconds and above) can be detd. by time-resolved XAS technique. By following the Fe K-edge energy shift, it is possible to detect the rate of iron oxidn. state evolution that matches that of the bimol. reaction in soln. The kinetic const. values obtained by XAS are in perfect agreement with those obtained by means of the concomitant UV-vis detection. This combined approach has the potential to provide unique insights into reaction mechanisms in the liq. phase that involve changes of the oxidn. state of a metal center, and it is particularly useful in complex chem. systems where possible interferences from species present in soln. could make it impossible to use other detection techniques. - 19Tavani, F.; Martini, A.; Capocasa, G.; Di Stefano, S.; Lanzalunga, O.; D’Angelo, P. Direct Mechanistic Evidence for a Non-Heme Complex Reaction through a Multivariate XAS Analysis. Inorg. Chem. 2020, 59, 9979– 9989, DOI: 10.1021/acs.inorgchem.0c01132[ACS Full Text
], [CAS], Google Scholar
19https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXht1Gms77L&md5=12e34f9e364b915a323d7739003d3795Direct Mechanistic Evidence for a Nonheme Complex Reaction through a Multivariate XAS AnalysisTavani, Francesco; Martini, Andrea; Capocasa, Giorgio; Di Stefano, Stefano; Lanzalunga, Osvaldo; D'Angelo, PaolaInorganic Chemistry (2020), 59 (14), 9979-9989CODEN: INOCAJ; ISSN:0020-1669. (American Chemical Society)We propose a method to directly det. the mechanism of the reaction between the nonheme complex FeII(tris(2-pyridylmethyl)amine) ([FeII(TPA)(CH3CN)2]2+) and peracetic acid (AcOOH) in CH3CN, working at room temp. A multivariate anal. is applied to the time-resolved coupled energy-dispersive X-ray absorption spectroscopy (EDXAS) reaction data, from which a set of spectral and concn. profiles for the reaction key species is derived. These "pure" extd. EDXAS spectra are then quant. characterized by full multiple scattering (MS) calcns. As a result, structural information for the elusive reaction intermediates [FeIII(TPA)(κ2-OOAc)]2+ and [FeIV(TPA)(O)(X)]+/2+ is obtained, and it is suggested that X = AcO- in opposition to X = CH3CN. The employed strategy is promising both for the spectroscopic characterization of reaction intermediates that are labile or silent to the conventional spectroscopic techniques, as well as for the mechanistic understanding of complex redox reactions involving org. substrates. A combined multivariate and theor. XAS anal. was proven to be a powerful method to obtain direct evidence for the mechanism of the reaction between the nonheme complex FeII(tris(2-pyridymethyl)amine) ([FeII(TPA)(CH3CN)2]2+) and peroxyacetic acid. This approach allowed to det. the time evolution of the concn. profiles for all reaction intermediates and to quant. characterize their structures, suggesting the sixth coordinating ligand of the nonheme oxo complex [FeIV(TPA)(O)(X)]+/2+ is X = AcO- in opposition to X = CH3CN. - 20Busato, M.; Melchior, A.; Migliorati, V.; Colella, A.; Persson, I.; Mancini, G.; Veclani, D.; D’Angelo, P. Elusive Coordination of the Ag+ Ion in Aqueous Solution: Evidence for a Linear Structure. Inorg. Chem. 2020, 59, 17291– 17302, DOI: 10.1021/acs.inorgchem.0c02494[ACS Full Text
], [CAS], Google Scholar
20https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXitl2qtLbL&md5=c833cf5ea5992612bdb7750a96c2c468Elusive Coordination of the Ag+ Ion in Aqueous Solution: Evidence for a Linear StructureBusato, Matteo; Melchior, Andrea; Migliorati, Valentina; Colella, Andrea; Persson, Ingmar; Mancini, Giordano; Veclani, Daniele; D'Angelo, PaolaInorganic Chemistry (2020), 59 (23), 17291-17302CODEN: INOCAJ; ISSN:0020-1669. (American Chemical Society)X-ray absorption spectroscopy (XAS) has been employed to study the coordination of the Ag+ ion in aq. soln. The conjunction of extended X-ray absorption fine structure (EXAFS) and X-ray absorption near-edge structure (XANES) data anal. provided results suggesting the preference for a first shell linear coordination with a mean Ag-O bond distance of 2.34(2) Å, different from the first generally accepted tetrahedral model with a longer mean Ag-O bond distance. Ab initio mol. dynamics simulations with the Car-Parrinello approach (CPMD) were also performed and were able to describe the coordination of the hydrated Ag+ ion in aq. soln. in very good agreement with the exptl. data. The high sensitivity for the closest environment of the photoabsorber of the EXAFS and XANES techniques, together with the long-range information provided by CPMD and large-angle X-ray scattering (LAXS), allowed us to reconstruct the three-dimensional model of the coordination geometry around the Ag+ ion in aq. soln. The obtained results from expts. and theor. simulations provided a complex picture with a certain amt. of water mols. with high configurational disorder at distances comprised between the first and second hydration spheres. This evidence may have caused the proliferation of the coordination nos. that have been proposed so far for Ag+ in water. Altogether these data show how the description of the hydration of the Ag+ ion in aq. soln. can be complex, differently from other metal species where hydration structures can be described by clusters with well-defined geometries. This diffuse hydration shell causes the Ag-O bond distance in the linear [Ag(H2O)2]+ ion to be ca. 0.2 Å longer than in isolated ions in solid state. Extended X-ray absorption fine structure (EXAFS), X-ray absorption near-edge structure (XANES), large-angle X-ray scattering (LAXS), and Car-Parrinello mol. dynamics (CPMD) provided a reliable detn. of the elusive hydration structure of the Ag+ ion. A linear first shell with a mean Ag-O distance of 2.34(2) Å is obsd., surrounded by a few water mols. at a relatively short distance, ca. 2.6 Å, and another set of waters as a swarm at ca. 4 Å. - 21Isegawa, K.; Ueda, K.; Hiwasa, S.; Amemiya, K.; Mase, K.; Kondoh, H. Formation of Carbonate on Ag(111) under Exposure to Ethylene and Oxygen Gases Evidenced by Near Ambient Pressure XPS and NEXAFS. Chem. Lett. 2019, 48, 159– 162, DOI: 10.1246/cl.180891[Crossref], [CAS], Google Scholar21https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1MXotlKit7o%253D&md5=854e5bca31af9b7c9789a6abded5a8a8Formation of carbonate on Ag(111) under exposure to ethylene and oxygen gases evidenced by near ambient pressure XPS and NEXAFSIsegawa, Kazuhisa; Ueda, Kohei; Hiwasa, Satoru; Amemiya, Kenta; Mase, Kazuhiko; Kondoh, HiroshiChemistry Letters (2019), 48 (2), 159-162CODEN: CMLTAG; ISSN:0366-7022. (Chemical Society of Japan)The active oxygen species for ethylene epoxidn. on Ag surfaces has been a long-standing issue. We conducted in situ observations of Ag(111) surfaces under exposure to ethylene and oxygen gases with near ambient pressure (NAP) XPS and near-edge X-ray absorption fine structure spectroscopy. Combined results of these spectroscopies evidence that a carbonate species with a flat-lying configuration is formed on the Ag(111) surface at 370-500K under exposure to the NAP gas mixt. of ethylene and oxygen.
- 22Castán-Guerrero, C.; Krizmancic, D.; Bonanni, V.; Edla, R.; Deluisa, A.; Salvador, F.; Rossi, G.; Panaccione, G.; Torelli, P. A Reaction Cell for Ambient Pressure Soft X-ray Absorption Spectroscopy. Rev. Sci. Instrum. 2018, 89, 054101, DOI: 10.1063/1.5019333[Crossref], [PubMed], [CAS], Google Scholar22https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1cXptVWksb4%253D&md5=5931940d1810ce8e49c1dc57a2eaea44A reaction cell for ambient pressure soft x-ray absorption spectroscopyCastan-Guerrero, C.; Krizmancic, D.; Bonanni, V.; Edla, R.; Deluisa, A.; Salvador, F.; Rossi, G.; Panaccione, G.; Torelli, P.Review of Scientific Instruments (2018), 89 (5), 054101/1-054101/8CODEN: RSINAK; ISSN:0034-6748. (American Institute of Physics)The authors present a new exptl. setup for performing x-ray Absorption Spectroscopy (XAS) in the soft X-ray range at ambient pressure. The ambient pressure XAS setup is fully compatible with the ultra high vacuum environment of a synchrotron radiation spectroscopy beamline end station by ultrathin Si3N4 membranes acting as windows for the x-ray beam and seal of the atm. sample environment. The XAS detection is performed in total electron yield (TEY) mode by probing the drain current from the sample with a picoammeter. The high signal/noise ratio achievable in the TEY mode, combined with a continuous scanning of the x-ray energies, makes it possible recording XAS spectra in a few seconds. The 1st results show the performance of this setup to record fast XAS spectra from sample surfaces exposed at atm. pressure, even in the case of highly insulating samples. The use of a permanent magnet inside the reaction cell enables the measurement of x-ray MCD at ambient pressure. (c) 2018 American Institute of Physics.
- 23Braglia, L.; Fracchia, M.; Ghigna, P.; Minguzzi, A.; Meroni, D.; Edla, R.; Vandichel, M.; Ahlberg, E.; Cerrato, G.; Torelli, P. Understanding Solid-Gas Reaction Mechanisms by Operando Soft X-Ray Absorption Spectroscopy at Ambient Pressure. J. Phys. Chem. C 2020, 124, 14202– 14212, DOI: 10.1021/acs.jpcc.0c02546[ACS Full Text
], [CAS], Google Scholar
23https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXhtV2ks7%252FK&md5=417d1e4ba6e318d56920dbe62b6da537Understanding Solid-Gas Reaction Mechanisms by Operando Soft X-Ray Absorption Spectroscopy at Ambient PressureBraglia, Luca; Fracchia, Martina; Ghigna, Paolo; Minguzzi, Alessandro; Meroni, Daniela; Edla, Raju; Vandichel, Matthias; Ahlberg, Elisabet; Cerrato, Giuseppina; Torelli, PieroJournal of Physical Chemistry C (2020), 124 (26), 14202-14212CODEN: JPCCCK; ISSN:1932-7447. (American Chemical Society)Ambient-pressure operando soft X-ray absorption spectroscopy (soft-XAS) was applied to study the reactivity of hydroxylated SnO2 nanoparticles toward reducing gases. H2 was first used as a test case, showing that the gas phase and surface states can be simultaneously probed: Soft-XAS at the O K-edge gains sensitivity toward the gas phase, while at the Sn M4,5-edges, tin surface states are explicitly probed. Results obtained by flowing hydrocarbons (CH4 and CH3CHCH2) unequivocally show that these gases react with surface hydroxyl groups to produce water without producing carbon oxides and release electrons that localize on Sn to eventually form SnO. The partially reduced SnO2-x layer at the surface of SnO2 is readily reoxidized to SnO2 by treating the sample with O2 at mild temps. (>200°C), revealing the nature of "electron sponge" of tin oxide. The expts., combined with DFT calcns., allowed devising of a mechanism for dissociative hydrocarbon adsorption on SnO2, involving direct redn. of Sn sites at the surface via cleavage of C-H bonds and the formation of methoxy- and/or methyl-tin species at the surface. - 24Braglia, L.; Tavani, F.; Mauri, S.; Edla, R.; Krizmancic, D.; Tofoni, A.; Colombo, V.; D’Angelo, P.; Torelli, P. Catching the Reversible Formation and Reactivity of Surface Defective Sites in Metal–Organic Frameworks: An Operando Ambient Pressure-NEXAFS Investigation. J. Phys. Chem. Lett. 2021, 12, 9182– 9187, DOI: 10.1021/acs.jpclett.1c02585[ACS Full Text
], [CAS], Google Scholar
24https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3MXitVaitL%252FO&md5=1559f49ab51f13270ae01c20fe258751Catching the Reversible Formation and Reactivity of Surface Defective Sites in Metal-Organic Frameworks: An Operando Ambient Pressure-NEXAFS InvestigationBraglia, Luca; Tavani, Francesco; Mauri, Silvia; Edla, Raju; Krizmancic, Damjan; Tofoni, Alessandro; Colombo, Valentina; D'Angelo, Paola; Torelli, PieroJournal of Physical Chemistry Letters (2021), 12 (37), 9182-9187CODEN: JPCLCD; ISSN:1948-7185. (American Chemical Society)In this work, we apply for the first time ambient pressure operando soft X-ray absorption spectroscopy (XAS) to investigate the location, structural properties, and reactivity of the defective sites present in the prototypical metal-org. framework HKUST-1. We obtained direct evidence that Cu+ defective sites form upon temp. treatment of the powd. form of HKUST-1 at 160 °C and that they are largely distributed on the material surface. Further, a thorough structural characterization of the Cu+/Cu2+ dimeric complexes arising from the temp.-induced dehydration/decarboxylation of the pristine Cu2+/Cu2+ paddlewheel units is reported. In addn. to characterizing the surface defects, we demonstrate that CO2 may be reversibly adsorbed and desorbed from the surface defective Cu+/Cu2+ sites. These findings show that ambient pressure soft-XAS, combined with state-of-the-art theor. calcns., allowed us to shed light on the mechanism involving the decarboxylation of the paddlewheel units on the surface to yield Cu+/Cu2+ complexes and their reversible restoration upon exposure to gaseous CO2.. - 25Tavani, F.; Fracchia, M.; Tofoni, A.; Braglia, L.; Jouve, A.; Morandi, S.; Manzoli, M.; Torelli, P.; Ghigna, P.; D’Angelo, P. Structural and Mechanistic Insights into Low-Temperature CO Oxidation over a Prototypical High Entropy Oxide by Cu L-edge Operando Soft X-ray absorption Spectroscopy. Phys. Chem. Chem. Phys. 2021, 23, 26575– 26584, DOI: 10.1039/D1CP03946F[Crossref], [PubMed], [CAS], Google Scholar25https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3MXisVyku7bP&md5=251ff77734ad8011242619e208d468e0Structural and mechanistic insights into low-temperature CO oxidation over a prototypical high entropy oxide by Cu L-edge operando soft X-ray absorption spectroscopyTavani, Francesco; Fracchia, Martina; Tofoni, Alessandro; Braglia, Luca; Jouve, Andrea; Morandi, Sara; Manzoli, Maela; Torelli, Piero; Ghigna, Paolo; D'Angelo, PaolaPhysical Chemistry Chemical Physics (2021), 23 (46), 26575-26584CODEN: PPCPFQ; ISSN:1463-9076. (Royal Society of Chemistry)High entropy oxides (HEOs) are an emerging class of materials constituted by multicomponent systems that are receiving special interest as candidates for obtaining novel and desirable properties. In this study we present a detailed investigation of the relevant intermediates arising at the surface of the prototypical HEO Mg0.2Co0.2Ni0.2Cu0.2Zn0.2O during low-temp. CO oxidn. By combining Cu L2,3-edge operando soft X-ray absorption spectroscopy (soft-XAS) with d. functional theory simulations and in situ FT-IR spectroscopy, we propose that upon HEO exposure to CO at 235 °C reduced Cu(I) sites arise mostly coordinated to activated CO mols. and partly to bidentate carbonate species. When the HEO surface is then exposed to a stoichiometric mixt. of CO + 1/2O2 at 250 °C, CO2 is produced while bidentate carbonate moieties remain interacting with the Cu(I) sites. We structurally characterize the carbonate and CO preferential adsorption geometries on the Cu(I) surface metal centers, and find that CO adopts a bent conformation that may energetically favor its subsequent oxidn. The unique surface, structural and electronic sensitivity of soft-XAS coupled with the developed data anal. work-flow and supported by FT-IR spectroscopy may be beneficial to characterize often elusive surface properties of systems of catalytic interest.
- 26Martini, A.; Guda, S.; Guda, A.; Smolentsev, G.; Algasov, A.; Usoltsev, O.; Soldatov, M.; Bugaev, A.; Rusalev, Y.; Lamberti, C.; Soldatov, A. PyFitit: The Software for Quantitative Analysis of XANES Spectra Using Machine-Learning Algorithms. Comput. Phys. Commun. 2019, 107064Google ScholarThere is no corresponding record for this reference.
- 27Martini, A.; Guda, A. A.; Guda, S. A.; Dulina, A.; Tavani, F.; D’Angelo, P.; Borfecchia, E.; Soldatov, A. V. In Synchrotron Radiation Science and Applications. Springer Proceedings in Physics; Di Cicco, A., Giuli, G., Trapananti, A., Eds.; Springer, 2021; Vol. 220; pp 65– 84.
- 28Tavani, F.; Capocasa, G.; Martini, A.; Sessa, F.; Di Stefano, S.; Lanzalunga, O.; D’Angelo, P. Direct Structural and Mechanistic Insights into Fast Bimolecular Chemical Reactions in Solution through a Coupled XAS/UV-Vis Multivariate Statistical Analysis. Dalton Trans 2021, 50, 131– 142, DOI: 10.1039/D0DT03083J[Crossref], [PubMed], [CAS], Google Scholar28https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXisVejs7jE&md5=b45e428fd885b912fc580682a96acf4bDirect structural and mechanistic insights into fast bimolecular chemical reactions in solution through a coupled XAS/UV-Vis multivariate statistical analysisTavani, Francesco; Capocasa, Giorgio; Martini, Andrea; Sessa, Francesco; Di Stefano, Stefano; Lanzalunga, Osvaldo; D'Angelo, PaolaDalton Transactions (2021), 50 (1), 131-142CODEN: DTARAF; ISSN:1477-9226. (Royal Society of Chemistry)In this work, we obtain detailed mechanistic and structural information on bimol. chem. reactions occurring in soln. on the second to millisecond time scales through the combination of a statistical, multivariate and theor. anal. of time-resolved coupled X-ray Absorption Spectroscopy (XAS) and UV-Vis data. We apply this innovative method to investigate the sulfoxidn. of p-cyanothioanisole and p-methoxythioanisole by the nonheme FeIV oxo complex [N4Py·FeIV(O)]2+ (N4Py = N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine) in acetonitrile at room temp. By employing statistical and multivariate techniques we det. the no. of key chem. species involved along the reaction paths and derive spectral and concn. profiles for the reaction intermediates. From the quant. anal. of the XAS spectra we obtain accurate structural information for all reaction intermediates and provide the first structural characterization in soln. of complex [N4Py·FeIII(OH)]2+. The employed strategy is promising for the spectroscopic characterization of transient species formed in redox reactions.
- 29Tavani, F.; Capocasa, G.; Martini, A.; Sessa, F.; Di Stefano, S.; Lanzalunga, O.; D’Angelo, P. Activation of C-H Bonds by a Nonheme Iron(IV)-Oxo Complex: Mechanistic Evidence through a Coupled EDXAS/UV-Vis Multivariate Analysis. Phys. Chem. Chem. Phys. 2021, 23, 1188– 1196, DOI: 10.1039/D0CP04304D[Crossref], [PubMed], [CAS], Google Scholar29https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXis1SgsL%252FO&md5=3520a37ba8568225c65af4781dcdff9dActivation of C-H bonds by a nonheme iron(IV)-oxo complex: mechanistic evidence through a coupled EDXAS/UV-Vis multivariate analysisTavani, Francesco; Capocasa, Giorgio; Martini, Andrea; Sessa, Francesco; Di Stefano, Stefano; Lanzalunga, Osvaldo; D'Angelo, PaolaPhysical Chemistry Chemical Physics (2021), 23 (2), 1188-1196CODEN: PPCPFQ; ISSN:1463-9076. (Royal Society of Chemistry)The understanding of reactive processes involving org. substrates is crucial to chem. knowledge and requires multidisciplinary efforts for its advancement. Herein, we apply a combined multivariate, statistical and theor. anal. of coupled time-resolved X-ray absorption (XAS)/UV-Vis data to obtain detailed mechanistic information for on the C-H bond activation of 9,10-dihydroanthracene (DHA) and diphenylmethane (Ph2CH2) by the nonheme FeIV-oxo complex [N4Py·FeIV(O)]2+ (N4Py = N,N-bis(2-pyridylmethyl)-N-bis(2-pyridyl)methylamine) in CH3CN at room temp. Within this approach, we det. the no. of key chem. species present in the reaction mixts. and derive spectral and concn. profiles for the reaction intermediates. From the quant. anal. of the XAS spectra the transient intermediate species are structurally detd. As a result, it is suggested that, while DHA is oxidized by [N4Py·FeIV(O)]2+ with a hydrogen atom transfer-electron transfer (HAT-ET) mechanism, Ph2CH2 is oxidized by the nonheme iron-oxo complex through a HAT-radical dissocn. pathway. In the latter process, we prove that the intermediate FeIII complex [N4Py·FeIII(OH)]2+ is not able to oxidize the diphenylmethyl radical and we provide its structural characterization in soln. The employed combined exptl. and theor. strategy is promising for the spectroscopic characterization of transient intermediates as well as for the mechanistic investigation of redox chem. transformations on the second to millisecond time scales.
- 30Tavani, F.; Fracchia, M.; Pianta, N.; Ghigna, P.; Quartarone, E.; D’Angelo, P. Multivariate Curve Resolution Analysis of Operando XAS Data for the Investigation of the Lithiation Mechanisms in High Entropy Oxides. Chem. Phys. Lett. 2020, 760, 137968, DOI: 10.1016/j.cplett.2020.137968[Crossref], [CAS], Google Scholar30https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3cXitVKgur3F&md5=0d3af0d5788149646bed68d0a0941318Multivariate curve resolution analysis of operando XAS data for the investigation of the lithiation mechanisms in high entropy oxidesTavani, Francesco; Fracchia, Martina; Pianta, Nicolo; Ghigna, Paolo; Quartarone, Eliana; D'Angelo, PaolaChemical Physics Letters (2020), 760 (), 137968CODEN: CHPLBC; ISSN:0009-2614. (Elsevier B.V.)Transition metal-based high entropy oxides (TM-HEO) have recently been gaining interest for their potential use as anodes in next-generation Li-ion batteries. In such systems, however, the lithiation/delithiation mechanisms remain a matter of ongoing investigation. In this work we demonstrate the suitability of Multivariate Curve Resoln. (MCR) of operando X-ray absorption spectroscopy (XAS) data to study the lithiation mechanisms in the TM-HEO (Mg0.2Co0.2Ni0.2Cu0.2Zn0.2)O. Through the MCR anal., the no., nature and concn. evolution as a function of stored charge of all Cu-, Ni- and Co-related active species present during the first lithiation cycle is obtained.
- 31Kleiman, S.; Chaim, R. Thermal Stability of MgO Nanoparticles. Mater. Lett. 2007, 61, 4489– 4491, DOI: 10.1016/j.matlet.2007.02.032[Crossref], [CAS], Google Scholar31https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2sXpsFOrs7g%253D&md5=b4518b8554ce09b9274e98e11e5dadc1Thermal stability of MgO nanoparticlesKleiman, Sagiv; Chaim, RachmanMaterials Letters (2007), 61 (23-24), 4489-4491CODEN: MLETDJ; ISSN:0167-577X. (Elsevier B.V.)Thermal stability of nanocryst. MgO particles with av. diam. of 11 nm was investigated by annealing of the cold isostatically pressed compacts between 600 °C and 900 °C for various durations. Sintering time vs. grain radius at 800 °C demonstrated a linear line with the slope of ∼ 4 similar to that expected for surface diffusion. High resoln. scanning electron microscope images from different specimens showed a porous microstructure of interconnected particles typical for initial sintering. Arrhenius plot of the grain size data revealed the activation energy of 161 ±11 kJ mol-1 for the growth process in agreement with those reported for grain boundary grooving expts. It was found that MgO particles undergo coarsening already at temps. as low as 0.31 of the MgO m.p. (3125 K). Increase in the particle diam. and decrease in the surface area were assocd. with surface diffusion mechanism that leads to initial sintering between the particles.
- 32Aritani, H.; Yamada, H.; Nishio, T.; Shiono, T.; Imamura, S.; Kudo, M.; Hasegawa, S.; Tanaka, T.; Yoshida, S. Characterization of Li-Doped MgO Catalysts for Oxidative Coupling of Methane by Means of Mg K-Edge XANES. J. Phys. Chem. B 2000, 104, 10133– 10143, DOI: 10.1021/jp000291y[ACS Full Text
], [CAS], Google Scholar
32https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3cXntlKgurw%253D&md5=240385a1df9f596b0b0b5bbc4a687d6fCharacterization of Li-Doped MgO Catalysts for Oxidative Coupling of Methane by Means of Mg K-Edge XANESAritani, Hirofumi; Yamada, Hiroyuki; Nishio, Takashi; Shiono, Takeshi; Imamura, Seiichiro; Kudo, Masataka; Hasegawa, Sadao; Tanaka, Tsunehiro; Yoshida, SatohiroJournal of Physical Chemistry B (2000), 104 (44), 10133-10143CODEN: JPCBFK; ISSN:1089-5647. (American Chemical Society)To characterize active defect sites in the near-surface and bulk phase of MgO in Li-doped MgO, structural analyses were carried out by means of XRD, XPS, Mg K-edge XANES, and SEM techniques. For Li-MgO calcined at 873 K, Li doping at a low content (2.5 wt % as Li) brings about the formation of defect species only in the near-surface, which is due to the localization of doped Li ions in the surface. In this case, the catalytic species contg. a Li+-O- center exists in the surface region. At higher contents of more than 7.5 wt %, Li ions penetrate the MgO bulk, and its crystallinity decreases. The defect species possibly exist in the bulk phase. After oxidative coupling of methane reaction, the defect species are formed in the near-surface over MgO and Li-MgO. However, the C2 selectivity is much higher on Li-MgO than on MgO. It is concluded that the defect species contg. Li+-O- in both surface and bulk can act as the active species for producing C2 compds. with high selectivity. - 33Klysubun, W.; Kidkhunthod, P.; Tarawarakarn, P.; Sombunchoo, P.; Kongmark, C.; Limpijumnong, S.; Rujirawat, S.; Yimnirun, R.; Tumcharern, G.; Faungnawakij, K. SUT-NANOTEC-SLRI Beamline for X-ray Absorption Spectroscopy. J. Synchr. Rad. 2017, 24, 707– 716, DOI: 10.1107/S1600577517004830
- 34Singh, J.; Kumar, M.; Lee, I.-J.; Chae, K. X-ray Reflectivity and Near Edge X-ray Absorption Fine Structure Investigations of MgO Thin Films. Appl. Sci. Lett. 2017, 3.Google ScholarThere is no corresponding record for this reference.
- 35Yoshioka, S.; Tsuruta, K.; Yamamoto, T.; Yasuda, K.; Matsumura, S.; Ishikawa, N.; Kobayashi, E. X-ray Absorption Near Edge Structure and First-Principles Spectral Investigations of Cationic Disorder in MgAl2O4 Induced by Swift Heavy Ions. Phys. Chem. Chem. Phys. 2018, 20, 4962– 4969, DOI: 10.1039/C7CP07591J[Crossref], [PubMed], [CAS], Google Scholar35https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1cXitFOqsr8%253D&md5=85adb764971b46b118dafa1bfb9f04d6X-ray absorption near edge structure and first-principles spectral investigations of cationic disorder in MgAl2O4 induced by swift heavy ionsYoshioka, S.; Tsuruta, K.; Yamamoto, T.; Yasuda, K.; Matsumura, S.; Ishikawa, N.; Kobayashi, E.Physical Chemistry Chemical Physics (2018), 20 (7), 4962-4969CODEN: PPCPFQ; ISSN:1463-9076. (Royal Society of Chemistry)Cationic disorder in the MgAl2O4 spinel induced by swift heavy ions was investigated using the X-ray absorption near edge structure. With changes in the irradn. fluences of 200 MeV Xe ions, the Mg K-edge and Al K-edge spectra were synchronously changed. The calcd. spectra based on d. function theory indicate that the change in the exptl. spectra was due to cationic disorder between Mg in tetrahedral sites and Al in octahedral sites. These results suggest a high inversion degree to an extent that the completely random configuration is achieved in MgAl2O4 induced by the high d. electronic excitation under swift heavy ion irradn.
- 36Witte, K.; Streeck, C.; Mantouvalou, I.; Suchkova, S. A.; Lokstein, H.; Grötzsch, D.; Martyanov, W.; Weser, J.; Kanngieer, B.; Beckhoff, B.; Stiel, H. Magnesium K-Edge NEXAFS Spectroscopy of Chlorophyll A in Solution. J. Phys. Chem. B 2016, 120, 11619– 11627, DOI: 10.1021/acs.jpcb.6b05791[ACS Full Text
], [CAS], Google Scholar
36https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC28XhslCktrbM&md5=710f7e8c001b79ec3a236b2957bef4d9Magnesium K-Edge NEXAFS Spectroscopy of Chlorophyll a in SolutionWitte, Katharina; Streeck, Cornelia; Mantouvalou, Ioanna; Suchkova, Svetlana A.; Lokstein, Heiko; Groetzsch, Daniel; Martyanov, Wjatscheslav; Weser, Jan; Kanngiesser, Birgit; Beckhoff, Burkhard; Stiel, HolgerJournal of Physical Chemistry B (2016), 120 (45), 11619-11627CODEN: JPCBFK; ISSN:1520-5207. (American Chemical Society)The interaction of the central magnesium atom of chlorophyll a (Chl a) with its carbon and nitrogen backbone was investigated by magnesium (Mg) K near edge x-ray absorption fine structure (NEXAFS) spectroscopy in fluorescence detection mode. Chl a was measured as 1*10-2 mol/l ethanol soln., which represents an upper limit of concn. without aggregation and as dried droplets. For the first time, the investigation of the structure of Chl a in a liq. environment by means of x-ray absorption spectroscopy is demonstrated. A preedge feature in the dissolved as well as in dried Chl a NEXFAS spectra has been identified as a characteristic transition originating from the intact Chl a mol. This result is confirmed by theor. DFT calcns. leading to MOs (MO) which are mainly situated on the magnesium atom and nitrogen and carbon atoms from the pyrrole rings. The description is the first referring to the MO distribution with respect to the central Mg ion of Chl a and the surrounding atoms. Based there upon, new approaches for the investigations of dynamic processes of mols. in soln. and the structure-function relationships of photosynthetic pigments and pigment-protein complexes in their native environment can be developed. - 37Joly, Y. X-ray Absorption Near-Edge Structure Calculations Beyond the Muffin-Tin Approximation. Phys. Rev. B 2001, 63, 125120, DOI: 10.1103/PhysRevB.63.125120[Crossref], [CAS], Google Scholar37https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3MXhvV2qtrY%253D&md5=ff7c161f8eaa60274bd434cb6de6ea97x-ray absorption near-edge structure calculations beyond the muffin-tin approximationJoly, Y.Physical Review B: Condensed Matter and Materials Physics (2001), 63 (12), 125120/1-125120/10CODEN: PRBMDO; ISSN:0163-1829. (American Physical Society)A new scheme for calcg. the x-ray absorption near edge structure (XANES) based on the finite-difference method is proposed. It allows completely free potential shape and, in particular, is not constrained to the muffin-tin approxn. In approach, the calcn. of the final states is performed in real space. The Schrodinger equation is solved in a discrete form on the node points of a 3-dimensional grid. The unknowns are the values of the wave functions at the grid points. The validity of the method is shown on 2 different systems the metallic Cu and the CO mol.; then, the differences resulting from muffin-tin and non-muffin-tin calcns. are shown on different typical mols.
- 38Bunău, O.; Joly, Y. Self-Consistent Aspects of X-ray Absorption Calculations. J. Phys: Condens. Matter 2009, 21, 345501[Crossref], [PubMed], [CAS], Google Scholar38https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD1MXhtFCht77N&md5=ac5e837f05c62e7d8b5859f68768ef0fSelf-consistent aspects of X-ray absorption calculationsBunau, O.; Joly, Y.Journal of Physics: Condensed Matter (2009), 21 (34), 345501/1-345501/11CODEN: JCOMEL; ISSN:0953-8984. (Institute of Physics Publishing)We implemented a self-consistent, real-space x-ray absorption calcn. within the FDMNES code. We performed the self-consistency within several schemes and identified which one is the most appropriate. We show a method that allows a rigorous setting of the Fermi level and thus an estn. of the energy cutoff for the identification and elimination of the occupied states. We investigated what are the structures where one can afford performing the self-consistent calcn. at a lesser cluster radius than the absorption one. We exemplify the effects of the self-consistency at the K-edge and for several ref. cases, including the copper Cu and the rutile TiO2. We verified the robustness of our procedure on the transitional 3d and 4d elements. Although amelioration can be noticed, the self-consistency performed at the K-edge does not bring a major improvement of the calcd. spectra. Taking into consideration a non-self-consistent, non-spherical potential gives better results than a self-consistent muffin-tin approxn. calcn.
- 39Guda, S. A.; Guda, A. A.; Soldatov, M. A.; Lomachenko, K. A.; Bugaev, A. L.; Lamberti, C.; Gawelda, W.; Bressler, C.; Smolentsev, G.; Soldatov, A. V.; Joly, Y. Optimized Finite Difference Method for the Full-Potential XANES Simulations: Application to Molecular Adsorption Geometries in MOFs and Metal-Ligand Intersystem Crossing Transients. J. Chem. Th. Comp. 2015, 11, 4512– 4521, DOI: 10.1021/acs.jctc.5b00327
- 40Pankin, I.; Borfecchia, E.; Martini, A.; Lomachenko, K.; Lamberti, C.; Soldatov, A. DFT-assisted XANES Simulations to Discriminate Different Monomeric CuII Species in CHA Catalysts. Radiat. Phys. Chem. 2020, 175, 108510, DOI: 10.1016/j.radphyschem.2019.108510[Crossref], [CAS], Google Scholar40https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1MXhvFOiur7M&md5=8e2bf422a7e8a40e85ef945375cdc85bDFT-assisted XANES simulations to discriminate different monomeric CuII species in CHA catalystsPankin, I. A.; Borfecchia, E.; Martini, A.; Lomachenko, K. A.; Lamberti, C.; Soldatov, A. V.Radiation Physics and Chemistry (2020), 175 (), 108510CODEN: RPCHDM; ISSN:0969-806X. (Elsevier B.V.)Herein, we present Cu K-edge XANES (X-ray Absorption Near Edge Structure) simulations for different framework interacting Z-CuII species proposed to form as an active site after high-temp. activation in Cu-exchanged chabazite zeolites, representing promising materials for selective catalytic redn. of NOx in the presence of ammonia and direct conversion of methane to methanol. We critically compare the simulated spectra to previously collected data for an O2-activated Cu-chabazite sample. D. of states (DOS) calcns. allow us to get more insights in describing the nature of XANES features obsd. in the simulated spectra. To demonstrate the potential of the method, we finally explore the impact of systematic variations of selected structural parameters on the theor. XANES features.
- 41Amodeo, J.; Merkel, S.; Tromas, C.; Carrez, P.; Korte-Kerzel, S.; Cordier, P.; Chevalier, J. Dislocations and Plastic Deformation in MgO Crystals: A Review. Crystals 2018, 8, 240 DOI: 10.3390/cryst8060240[Crossref], [CAS], Google Scholar41https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC1cXhvVWktLrK&md5=9e9aff857cf211adcc7067dbe0132009Dislocations and plastic deformation in MgO crystals: a reviewAmodeo, Jonathan; Merkel, Sebastien; Tromas, Christophe; Carrez, Philippe; Korte-Kerzel, Sandra; Cordier, Patrick; Chevalier, JeromeCrystals (2018), 8 (6), 240/1-240/53CODEN: CRYSBC; ISSN:2073-4352. (MDPI AG)This review paper focuses on dislocations and plastic deformation in magnesium oxide crystals. MgO is an archetype ionic ceramic with refractory properties which is of interest in several fields of applications such as ceramic materials fabrication, nano-scale engineering and Earth sciences. In its bulk single crystal shape, MgO can deform up to few percent plastic strain due to dislocation plasticity processes that strongly depend on external parameters such as pressure, temp., strain rate, or crystal size. This review describes how a combined approach of macro-mech. tests, multi-scale modeling, nano-mech. tests, and high pressure expts. and simulations have progressively helped to improve our understanding of MgO mech. behavior and elementary dislocation-based processes under stress.
- 42Becke, A. D. A New Mixing of Hartree-Fock and Local Density Functional Theories. J. Chem. Phys. 1993, 98, 1372– 1377, DOI: 10.1063/1.464304[Crossref], [CAS], Google Scholar42https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK3sXhtlagt7o%253D&md5=02a9289532197e7445af684bb29f4e11A new mixing of Hartree-Fock and local-density-functional theoriesBecke, Axel D.Journal of Chemical Physics (1993), 98 (2), 1372-7CODEN: JCPSA6; ISSN:0021-9606.Previous attempts to combine the Hartree-Fock theory with the local d.-functional theory were unsuccessful in applications to mol. bonding. A new coupling is presented of these two theories that maintains their simplicity and computational efficiency, and yet greatly improves their predictive power. Very encouraging results of tests on atomization energies, ionization potentials, and proton affinities are reported, and the potential for future development is discussed.
- 43Lee, C.; Yang, W.; Parr, R. G. Development of the Colle-Salvetti Correlation-Energy Formula into a Functional of the Electron Density. Phys. Rev. B 1988, 37, 785– 789, DOI: 10.1103/PhysRevB.37.785[Crossref], [PubMed], [CAS], Google Scholar43https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaL1cXktFWrtbw%253D&md5=ee7b59267a2ff72e15171a481819ccf8Development of the Colle-Salvetti correlation-energy formula into a functional of the electron densityLee, Chengteh; Yang, Weitao; Parr, Robert G.Physical Review B: Condensed Matter and Materials Physics (1988), 37 (2), 785-9CODEN: PRBMDO; ISSN:0163-1829.A correlation-energy formula due to R. Colle and D. Salvetti (1975), in which the correlation energy d. is expressed in terms of the electron d. and a Laplacian of the 2nd-order Hartree-Fock d. matrix, is restated as a formula involving the d. and local kinetic-energy d. On insertion of gradient expansions for the local kinetic-energy d., d.-functional formulas for the correlation energy and correlation potential are then obtained. Through numerical calcns. on a no. of atoms, pos. ions, and mols., of both open- and closed-shell type, it is demonstrated that these formulas, like the original Colle-Salvetti formulas, give correlation energies within a few percent.
- 44Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J. R.; Scalmani, G.; Barone, V.; Mennucci, B.; Petersson, G. A.; Nakatsuji, H.; Caricato, M.; Li, X.; Hratchian, H. P.; Izmaylov, A. F.; Bloino, J.; Zheng, G.; Sonnenberg, J. L.; Hada, M.; Ehara, M.; Toyota, K.; Fukuda, R.; Hasegawa, J.; Ishida, M.; Nakajima, T.; Honda, Y.; Kitao, O.; Nakai, H.; Vreven, T.; Montgomery, J. A., Jr.; Peralta, J. E.; Ogliaro, F.; Bearpark, M.; Heyd, J. J.; Brothers, E.; Kudin, K. N.; Staroverov, V. N.; Kobayashi, R.; Normand, J.; Raghavachari, K.; Rendell, A.; Burant, J. C.; Iyengar, S. S.; Tomasi, J.; Cossi, M.; Rega, N.; Millam, J. M.; Klene, M.; Knox, J. E.; Cross, J. B.; Bakken, V.; Adamo, C.; Jaramillo, J.; Gomperts, R.; Stratmann, R. E.; Yazyev, O.; Austin, A. J.; Cammi, R.; Pomelli, C.; Ochterski, J. W.; Martin, R. L.; Morokuma, K.; Zakrzewski, V. G.; Voth, G. A.; Salvador, P.; Dannenberg, J. J.; Dapprich, S.; Daniels, A. D.; Farkas, Ã.; Foresman, J. B.; Ortiz, J. V.; Cioslowski, J.; Fox, D. J. Gaussian 09 , Revision A.02, 2009.Google ScholarThere is no corresponding record for this reference.
- 45Pye, C. C.; Rudolph, W. W. An Ab Initio and Raman Investigation of Magnesium(II) Hydration. J. Phys. Chem. A 1998, 102, 9933– 9943, DOI: 10.1021/jp982709m[ACS Full Text
], [CAS], Google Scholar
45https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1cXntVKntrg%253D&md5=a8f8d76e99b18342f8a0bd0ef0789569An ab Initio and Raman Investigation of Magnesium(II) HydrationPye, Cory C.; Rudolph, W. W.Journal of Physical Chemistry A (1998), 102 (48), 9933-9943CODEN: JPCAFH; ISSN:1089-5639. (American Chemical Society)The weak polarized Raman band assigned to the ν1-MgO6 mode of the hexaaquo Mg(II) ion was studied over the temp. range 25 to 125°. The 356 cm-1 stretching mode frequency decreases by ∼3 cm-1 but broadens by 13 cm-1 over a 100° temp. range. A depolarized mode at 235 cm-1 could be assigned to ν2. Probably the hexaaquo Mg(II) ion is thermodynamically stable in perchlorate and chloride solns. In sulfate solns., an equil. exists between the hexaaquo ion and an inner-sphere sulfato complex. Ab initio geometry optimizations of Mg(H2O)62+ were carried out at the Hartree-Fock and Moller-Plesset levels of theory, using various basis sets up to 6-31+G*. Frequency calcns. confirm that the Th structure is a min. The unscaled frequencies of the MgO6 unit are lower than the exptl. frequencies, and scaling only marginally improves the agreement. The theor. binding enthalpy for the hexaaquo Mg(II) ion accounts for ∼70% of the exptl. hydration energy of Mg(II). A comparison of 3 models for the 2nd hydration sphere is presented, and the most suitable is one of lower symmetry T, in which alternate faces of the MgO6 octahedron are H-bonded to H2O trimers. The unscaled Hartree-Fock frequencies agree very well with exptl. observations, giving nearly exact agreement with expt. - 46Matwiyoff, N. A.; Taube, H. Direct Determination of the Solvation Number of Magnesium(II) ion in water, Aqueous Acetone, and Methanolic Acetone solutions. J. Am. Chem. Soc. 1968, 90, 2796– 2800, DOI: 10.1021/ja01013a012[ACS Full Text
], [CAS], Google Scholar
46https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaF1cXktFegtb8%253D&md5=a2fd838ec5de7ecba4e9ef57295cc10fDirect determination of the solvation number of magnesium(II) ion in water, aqueous acetone, and methanolic acetone solutionsMatwiyoff, N. A.; Taube, H.Journal of the American Chemical Society (1968), 90 (11), 2796-800CODEN: JACSAT; ISSN:0002-7863.At temps. below -60°, the proton magnetic resonance (pmr) signals of the solvent mols. within the primary coordination sphere of the Mg2+ ion in aq. acetone, methanolic acetone, and concd. aq. solns. can be distinguished from those of the bulk solvent. From a comparison of the areas of the pmr lines of the solvent in the free and coordinated sites, the compn. of the primary solvation sphere of the Mg2+ ion in these solvents was Mg(MeOH)62+ in methanolic acetone and Mg(OH2)62+ in aq. acetone and H2O. The relative coalescence temps. of the coordinated and free solvent pmr signals indicate that the order of increasing lability of the complex ions in Mg(MeOH)62+ < Mg(OH2)62+ in aq. acetone < Mg-(OH2)62+ in H2O. - 47Skipper, N. T.; Neilson, G. W.; Cummings, S. C. An X-ray Diffraction Study of Ni(aq)2+ and Mg(aq)2+ by Difference Methods. J. Phys.: Condensed Matter 1989, 1, 3489– 3506[Crossref], [CAS], Google Scholar47https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaL1MXkvVCqtbw%253D&md5=9868673476f5d4809cd1dc087ad4b7f4An x-ray diffraction study of aquated nickel(2+) and magnesium(2+) by difference methodsSkipper, N. T.; Neilson, G. W.; Cummings, S. C.Journal of Physics: Condensed Matter (1989), 1 (22), 3489-506CODEN: JCOMEL; ISSN:0953-8984.Difference methods of x-ray diffraction were used to study the microscopic structure around Ni[aq]2+ and Mg[aq]2+ in a variety of aq. solns. Ref. to the results of neutron diffraction expts. show that Ni[aq]2+ and Mg[aq]2+ can be regarded as structurally isomorphic species, thereby enabling the local ionic structure to be measured in terms of the cation-oxygen and cation-cation radial pair distribution functions. Results are included for the dependence of these functions on concn., counter-ion species and the interchange of light and heavy water as the solvent.
- 48Bernal-Uruchurtu, M. I.; Ortega-Blake, I. A Refined Monte Carlo Study of Mg2+ and Ca2+ Hydration. J. Chem. Phys. 1995, 103, 1588– 1598, DOI: 10.1063/1.469781[Crossref], [CAS], Google Scholar48https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK2MXntFWltbg%253D&md5=4800a4c0a1e7999d6eda6da12dd3e7ddA refined Monte Carlo study of Mg2+ and Ca2+ hydrationBernal-Uruchurtu, M. I.; Ortega-Blake, I.Journal of Chemical Physics (1995), 103 (4), 1588-98CODEN: JCPSA6; ISSN:0021-9606. (American Institute of Physics)The interaction potential used includes polarization and non-additivity factors that have been reported to be crit. for the proper description of hydration. The effect of cell size, amt. of configurations needed to attain equil., and size of the statistical sample are studied. A microscopic anal. of the hydration shows that Mg2+ and its first shell can be considered as a supermol. embedded in the solvent. For Ca2+ this character is less marked and its first shell responds to the solvent more easily. The coordination properties of both ions are discussed. The differences in the coordination properties of both ions are due to a great extent to the differences in the water depletion zone beyond the first hydration shell. The contributions of each hydration shell to the total enthalpy of hydration are analyzed as well as the local densities related to the electrostriction.
- 49Obst, S.; Bradaczek, H. Molecular Dynamics Study of the Structure and Dynamics of the Hydration Shell of Alkaline and Alkaline-Earth Metal Cations. J. Phys. Chem. 1996, 100, 15677– 15687, DOI: 10.1021/jp961384b[ACS Full Text
], [CAS], Google Scholar
49https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK28XlsVWitbY%253D&md5=417f2edcd0ab07d163e630dad0af9cb3Molecular Dynamics Study of the Structure and Dynamics of the Hydration Shell of Alkali and Alkaline-Earth Metal CationsObst, Stefan; Bradaczek, HansJournal of Physical Chemistry (1996), 100 (39), 15677-15687CODEN: JPCHAX; ISSN:0022-3654. (American Chemical Society)Mol.-dynamics simulations of hydrated alkali and alk. earth metal cations at room temp. (T = 300 K) were carried out by using the CHARMM22 force field. Dynamic and static properties of systems contg. one ion and 123 or 525 water mols. were investigated by anal. of trajectories of 1 ns duration and compared to exptl. and theor. results. In addn., the size and the direction of the elementary motions of both the ions and the water mols. were investigated on the scale of the integration time step of 1 fs. Comparison between systems of different size revealed that for the larger system the diffusion coeff. and the no. of hydrogen bonds were increased. Radial pair distribution functions and coordination nos. are in good agreement with x-ray and neutron scattering data. The diffusion coeff. D of bulk TIP3P water in a system with 528 water mols. was by one-fourth higher than the exptl. value. Minor differences of approx. 10% between exptl. and simulated diffusion coeffs. were found for Li+, Na+, K+, and Mg2+. On the other hand, D was underestimated by the simulation for Ca2+ and Sr2+ by as much as 30%. On the av., 2.9 hydrogen bonds per bulk water mol. were found. The obsd. order of residence times for the monovalent ions, τ(Li+) > τ(Na+) > τ(K+), is in good agreement with the literature. Although τ was expected to increase with decreasing mass of the ion, the exchange of water mols. from the solvation shell of Mg2+ occurred much faster than for Ca2+. - 50Tongraar, A.; Michael Rode, B. The Role of Non-Additive Contributions on the Hydration Shell Structure of Mg2+ Studied by Born-Oppenheimer Ab Initio Quantum Mechanical/Molecular Mechanical Molecular Dynamics Simulation. Chem. Phys. Lett. 2001, 346, 485– 491, DOI: 10.1016/S0009-2614(01)00923-X[Crossref], [CAS], Google Scholar50https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD3MXnsVegsbw%253D&md5=325dccd3d7ea9019dc8a32599842c597The role of non-additive contributions on the hydration shell structure of Mg2+ studied by Born-Oppenheimer ab initio quantum mechanical/molecular mechanical molecular dynamics simulationTongraar, A.; Michael Rode, B.Chemical Physics Letters (2001), 346 (5,6), 485-491CODEN: CHPLBC; ISSN:0009-2614. (Elsevier Science B.V.)An ab initio quantum mech./mol. mech. (QM/MM) mol. dynamics simulation has been performed to investigate the effects of non-additive contributions on the hydration shell structure of Mg2+. The active-site region, the sphere including the second hydration shell of Mg2+, was treated by Born-Oppenheimer ab initio quantum mechanics, while the rest is described by classical pair potentials. A hydration complex with six inner shell waters and 12 s shell waters was obsd. It was also found that the effects of non-additive terms play an important role in the preferential orientation of water mols. inside the hydration sphere of Mg2+.
- 51Tongraar, A.; Rode, B. M. Structural Arrangement and Dynamics of the Hydrated Mg2+: an Ab Initio QM/MM Molecular Dynamics Simulation. Chem. Phys. Lett. 2005, 409, 304– 309, DOI: 10.1016/j.cplett.2005.04.062[Crossref], [CAS], Google Scholar51https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2MXlt1GqsLo%253D&md5=eec92e744d82f634b28e421a2cb33f72Structural arrangement and dynamics of the hydrated Mg2+: An ab initio QM/MM molecular dynamics simulationTongraar, Anan; Rode, Bernd MichaelChemical Physics Letters (2005), 409 (4-6), 304-309CODEN: CHPLBC; ISSN:0009-2614. (Elsevier B.V.)The structural arrangement and dynamics of solvated Mg2+ in dil. aq. soln. have been studied by ab initio QM/MM mol. dynamics simulation, in which the whole first and most of the second hydration shell of the ion were treated at Hartree-Fock level using LANL2DZ basis sets. Besides the most stable Mg2+(H2O)6 species, intermediates such as Mg2+(H2O)5(H2O), where at least one water mol. temporarily moves into the inter-shell region but remains H-bonded to inner-shell water, as well as transition complexes of the Mg2+(H2O)6(H2O) type, exist in aq. soln. The dynamics of solvate and surrounding water mols. are discussed in connection to the structure-forming' ability of Mg2+.
- 52Dudev, T.; Lim, C. Incremental Binding Free Energies in Mg2+ Complexes: A DFT Study. J. Phys. Chem. A 1999, 103, 8093– 8100, DOI: 10.1021/jp991575p[ACS Full Text
], [CAS], Google Scholar
52https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaK1MXlvVGhs7w%253D&md5=4cb9ef20226ae5ca43dc2080db42737bIncremental Binding Free Energies in Mg2+ Complexes: A DFT StudyDudev, Todor; Lim, CarmayJournal of Physical Chemistry A (1999), 103 (40), 8093-8100CODEN: JPCAFH; ISSN:1089-5639. (American Chemical Society)D. functional theory has been employed to evaluate the incremental binding energies, enthalpies, entropies, and free energies for the reactions of Mg2+ with water, methanol, formamide, and formate. The B3LYP/6-31+G* calcns. on the Mg2+ complexes show that the metal ion can accommodate no more than three neg. charged formates. For the neutral-ligand complexes, magnesium prefers to bind to methanol and formamide rather than water when the no. of ligands is less than four, but it prefers water to methanol and formamide for complexes with five or six ligands. These results have been rationalized in terms of steric crowding of the ligands around the metal ion and charge transfer from the ligand(s) to Mg2+. These two factors result in attenuation of the Mg-O bond distance and, hence, redn. in the electrostatic and polarization energies, which dominate the incremental binding energy. An empirical scheme, employing the incremental binding energies for Mg2+-single-type-ligand complexes, has been developed to accurately predict the total binding energy of Mg2+-mixed-ligand clusters. - 53D’Angelo, P.; Migliorati, V.; Sessa, F.; Mancini, G.; Persson, I. XANES Reveals the Flexible Nature of Hydrated Strontium in Aqueous Solution. J. Phys. Chem. B 2016, 120, 4114– 4124, DOI: 10.1021/acs.jpcb.6b01054[ACS Full Text
], [CAS], Google Scholar
53https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC28XlvVyqt7o%253D&md5=7bf9ff7a97f8f2e807c1d8745ed1d9ddXANES Reveals the Flexible Nature of Hydrated Strontium in Aqueous SolutionD'Angelo, Paola; Migliorati, Valentina; Sessa, Francesco; Mancini, Giordano; Persson, IngmarJournal of Physical Chemistry B (2016), 120 (17), 4114-4124CODEN: JPCBFK; ISSN:1520-5207. (American Chemical Society)X-ray absorption near-edge structure (XANES) spectroscopy has been used to det. the structure of the hydrated strontium in aq. soln. The XANES anal. has been carried out using solid [Sr(H2O)8](OH)2 as ref. model. Classical and Car-Parrinello mol. dynamics (MD) simulations have been carried out and in the former case two different sets of Lennard-Jones parameters have been used for the Sr2+ ion. The best performing theor. approach has been chosen on the basis of the exptl. results. XANES spectra have been calcd. starting from MD trajectories, without carrying out any minimization of the structural parameters. This procedure allowed us to properly account for thermal and structural fluctuations occurring in the aq. soln. in the anal. of the exptl. spectrum. A deconvolution procedure has been applied to the raw absorption data thus increasing the sensitivity of XANES spectroscopy. One of the classical MD simulations has been found to provide a XANES theor. spectrum in better agreement with the exptl. data. An 8-fold hydration complex with a Sr-O distance of 2.60 Å has been found to be compatible with the XANES data, in agreement with previous findings. However, the hydration shells of the strontium ions have been found to have a flexible nature with a fast ligand exchange rate between the first and second hydration shell occurring in the picosecond time scale. - 54Spezia, R.; Duvail, M.; Vitorge, P.; Cartailler, T.; Tortajada, J.; D’Angelo, P.; Gaigeot, M.-P.; Chillemi, G. A Coupled Car-Parrinello Molecular Dynamics and EXAFS Data Analysis Investigation of Aqueous Co2+. J. Phys. Chem. A 2006, 110, 13081– 13088, DOI: 10.1021/jp064688z[ACS Full Text
], [CAS], Google Scholar
54https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD28XhtFyntbfF&md5=a2ecd4561da2a702035dc3d5be397682A Coupled Car-Parrinello Molecular Dynamics and EXAFS Data Analysis Investigation of Aqueous Co2+Spezia, Riccardo; Duvail, Magali; Vitorge, Pierre; Cartailler, Thierry; Tortajada, Jeanine; Chillemi, Giovanni; D'Angelo, Paola; Gaigeot, Marie-PierreJournal of Physical Chemistry A (2006), 110 (48), 13081-13088CODEN: JPCAFH; ISSN:1089-5639. (American Chemical Society)We have studied the microscopic solvation structure of Co2+ in liq. water by means of d. functional theory (DFT)-based Car-Parrinello mol. dynamics (CPMD) simulations and extended X-ray absorption fine structure (EXAFS) data anal. The effect of the no. of explicit water mols. in the simulation box on the first and second hydration shell structures has been considered. Classical mol. dynamics simulations, using an effective two-body potential for Co2+-water interactions, were also performed to show box size effects in a larger range. We have found that the no. of explicit solvent mols. has a marginal role on the first solvation shell structural parameters, whereas larger boxes may be necessary to provide a better description of the second solvation shell. Car-Parrinello simulations were detd. to provide a reliable description of structural and dynamical properties of Co2+ in liq. water. In particular, they seem to describe both the first and second hydration shells correctly. The EXAFS signal was reconstructed from Car-Parrinello simulations. Good agreement between the theor. and exptl. signals was obsd., thus strengthening the microscopic picture of the Co2+ solvation properties obtained using first-principle simulations. - 55D’Angelo, P.; Roscioni, O. M.; Chillemi, G.; Della Longa, S.; Benfatto, M. Detection of Second Hydration Shells in Ionic Solutions by XANES: Computed Spectra for Ni2+ in Water Based on Molecular Dynamics. J. Am. Chem. Soc. 2006, 128, 1853– 1858, DOI: 10.1021/ja0562503[ACS Full Text
], [CAS], Google Scholar
55https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD28XntFCmtA%253D%253D&md5=6823dd3bb542c0e84bb5b780c98b1757Detection of Second Hydration Shells in Ionic Solutions by XANES: Computed Spectra for Ni2+ in Water Based on Molecular DynamicsD'Angelo, Paola; Roscioni, Otello Maria; Chillemi, Giovanni; Della Longa, Stefano; Benfatto, MaurizioJournal of the American Chemical Society (2006), 128 (6), 1853-1858CODEN: JACSAT; ISSN:0002-7863. (American Chemical Society)A general procedure to compute X-ray absorption near-edge structure (XANES) spectra within multiple-scattering theory starting from mol. dynamics (MD) structural data has been developed and applied to the study of a Ni2+ aq. soln. This method allows one to perform a quant. anal. of the XANES spectra of disordered systems using a proper description of the thermal and structural fluctuations. The XANES spectrum of Ni2+ in aq. soln. has been calcd. using the structural information obtained from the MD simulations without carrying out any minimization in the structural parameter space. A very good reprodn. of the exptl. data was obtained including the second-shell water mols. in the calcn., thus showing that the second hydration shell provides a detectable contribution to the XANES spectra of ionic solns. The anal. including the first-shell cluster only permitted us to quant. det. the effect of disorder on the amplitude of the XANES spectra for mol. complexes. These results simultaneously confirm the reliability of the procedure and the structural results obtained from MD simulations. The combination of MD and XANES is found to be very helpful to get important new insights into the quant. estn. of structural properties of disordered systems. - 56Radnai, T.; Kálmán, E.; Pollmer, K. X-Ray Diffraction Study of MgCl2 in Methanol. Zeitschrift fu̅r Naturforschung A 1984, 39, 464– 470, DOI: 10.1515/zna-1984-0508[Crossref], [CAS], Google Scholar56https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaL2cXkt12htLs%253D&md5=5f05e8b195bac6e674dee230b0212c8aX-ray diffraction study of magnesium chloride in methanolRadnai, T.; Kalman, E.; Pollmer, K.Zeitschrift fuer Naturforschung, Teil A: Physik, Physikalische Chemie, Kosmophysik (1984), 39A (5), 464-70CODEN: ZTAKDZ; ISSN:0340-4811.The structure of a concd. soln. of MgCl2 in methanol was studied by x-ray diffraction. The parameters for the ion-solvent interactions agree with those found in aq. solns. Both for Mg2+ and Cl-, the solvate shells are composed of 6 methanol mols. An av. octahedral arrangement of OH groups in the solvate shells of magnesium is probable. Octahedral sym. positions for CH3 groups proved to be unlikely.
- 57Nakamura, S.; Meiboom, S. Proton Magnetic Resonance Studies of the Solvation Shell of Mg2+ in Methanol. Solvation Number and Exchange Rate. J. Am. Chem. Soc. 1967, 89, 1765– 1772, DOI: 10.1021/ja00984a001[ACS Full Text
], [CAS], Google Scholar
57https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaF2sXht1SlsLg%253D&md5=330bf7c66f4ca1f0483fd94cd6ed560cProton magnetic resonance studies of the solvation shell of magnesium(II) in methanol. Solvation number and exchange rateNakamura, Shuzo; Meiboom, SaulJournal of the American Chemical Society (1967), 89 (8), 1765-72CODEN: JACSAT; ISSN:0002-7863.The exchange rate of MeOH mols. in the solvation shell of Mg++ in acidic anhyd. MeOH was detd. between -50 and 35° from the broadening of OH proton magnetic resonance signals of the free and bound MeOH. The CH3 signal of the coordinated MeOH, which was hidden behind the bulk CH3 line, can be observed by the addn. of Cu++ to the soln. From the temp. behavior of this signal, it can be concluded that ligand exchange, rather than simple OH-proton exchange, is the dominant process under the conditions of the expt. The first-order rate const. and activation parameters at 25° are: k = 4.7 × 103/sec., ΔH⧺ = 16.7 kcal mole-1, and ΔS⧺ = 14 entropy units. From relative intensity measurements of the signals at -80 and -19.2°, the solvation no. of the Mg++ was calcd. to be 6. Similar expts. with Li, Ca, Sr, and Ba perchlorates failed to show a sep. solvation-shell signal down to -110°. For these ions ligand exchange is apparently rapid down to that temp. - 58Faralli, C.; Pagliai, M.; Cardini, G.; Schettino, V. Ab Initio Molecular Dynamics Study of Mg2+ and Ca2+ Ions in Liquid Methanol. J. Chem. Th. Comp. 2008, 4, 156– 163, DOI: 10.1021/ct700209v[ACS Full Text
], [CAS], Google Scholar
58https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD2sXhsVehtbjN&md5=2ffb1d3b67734d22cf4f24cd63cd8763Ab Initio Molecular Dynamics Study of Mg2+ and Ca2+ Ions in Liquid MethanolFaralli, Cristian; Pagliai, Marco; Cardini, Gianni; Schettino, VincenzoJournal of Chemical Theory and Computation (2008), 4 (1), 156-163CODEN: JCTCCE; ISSN:1549-9618. (American Chemical Society)Ab initio Car-Parrinello mol. dynamics simulations have been performed in order to investigate the solvation properties of Mg2+ and Ca2+ in fully deuterated methanol soln. to better understand polarization effects induced by the ions. Charge transfer and dipole moment calcns. have been performed to give more detailed insight on the role of the electronic reorganization and its effect on the first solvation shell stability. The perturbation of the methanol H-bond network has been investigated.
Supporting Information
Supporting Information
ARTICLE SECTIONSThe Supporting Information is available free of charge at https://pubs.acs.org/doi/10.1021/acsami.2c10005.
Experimental details, data processing, MCR decomposition of the NEXAFS spectra, details on MD simulations and DFT calculations, 3D rendering of the employed reaction cell, theoretical NEXAFS calculations of DFT-optimized structures, MD Mg–O radial distribution functions of the Mg2+ ion in water and methanol, and convergence of the NEXAFS theoretical spectra calculated from MD snapshots of the Mg2+ ion in methanol (PDF)
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