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The Optimization of Bioorthogonal Epitope Ligation within MHC-I Complexes
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    The Optimization of Bioorthogonal Epitope Ligation within MHC-I Complexes
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    Leiden Institute of Chemistry and The Institute for Chemical Immunology, Leiden University Einsteinweg 55, 2333 CC Leiden, The Netherlands
    Department of Immunohematology and Blood Transfusion, Leiden University Medical Center and The Institute for Chemical Immunology, P.O. Box 9600, 2300 RC Leiden, The Netherlands
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    ACS Chemical Biology

    Cite this: ACS Chem. Biol. 2016, 11, 11, 3172–3178
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    https://doi.org/10.1021/acschembio.6b00498
    Published October 5, 2016
    Copyright © 2016 American Chemical Society

    Abstract

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    Antigen recognition followed by the activation of cytotoxic T-cells (CTLs) is a key step in adaptive immunity, resulting in clearance of viruses and cancers. The repertoire of peptides that have the ability to bind to the major histocompatibility type-I (MHC-I) is enormous, but the approaches available for studying the diversity of the peptide repertoire on a cell are limited. Here, we explore the use of bioorthogonal chemistry to quantify specific peptide–MHC-I complexes (pMHC-I) on cells. We show that modifying epitope peptides with bioorthogonal groups in surface accessible positions allows wild-type-like MHC-I binding and bioorthogonal ligation using fluorogenic chromophores in combination with a Cu(I)-catalyzed Huisgen cycloaddition reaction. We expect that this approach will make a powerful addition to the antigen presentation toolkit as for the first time it allows quantification of antigenic peptides for which no detection tools exist.

    Copyright © 2016 American Chemical Society

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    The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/acschembio.6b00498.

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    This article is cited by 10 publications.

    1. Mikkel H. S. Marqvorsen, Can Araman, Sander I. van Kasteren. Going Native: Synthesis of Glycoproteins and Glycopeptides via Native Linkages To Study Glycan-Specific Roles in the Immune System. Bioconjugate Chemistry 2019, 30 (11) , 2715-2726. https://doi.org/10.1021/acs.bioconjchem.9b00588
    2. Can Araman, Miriam E. van Gent, Nico J. Meeuwenoord, Nicole Heijmans, Mikkel H. S. Marqvorsen, Ward Doelman, Bart W. Faber, Bert A. ’t Hart, Sander I. Van Kasteren. Amyloid-like Behavior of Site-Specifically Citrullinated Myelin Oligodendrocyte Protein (MOG) Peptide Fragments inside EBV-Infected B-Cells Influences Their Cytotoxicity and Autoimmunogenicity. Biochemistry 2019, 58 (6) , 763-775. https://doi.org/10.1021/acs.biochem.8b00852
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    4. Thomas Bakkum, Tyrza van Leeuwen, Alexi J. C. Sarris, Daphne M. van Elsland, Dimitrios Poulcharidis, Herman S. Overkleeft, Sander I. van Kasteren. Quantification of Bioorthogonal Stability in Immune Phagocytes Using Flow Cytometry Reveals Rapid Degradation of Strained Alkynes. ACS Chemical Biology 2018, 13 (5) , 1173-1179. https://doi.org/10.1021/acschembio.8b00355
    5. Alexine S de Wit, Frans Bianchi, Geert van den Bogaart. Antigen presentation of post‐translationally modified peptides in major histocompatibility complexes. Immunology & Cell Biology 2025, 103 (2) , 161-177. https://doi.org/10.1111/imcb.12839
    6. Joey J. Kelly, Emily T. Ankrom, Sarah E. Newkirk, Damien Thévenin, Marcos M. Pires. Targeted acidosis mediated delivery of antigenic MHC-binding peptides. Frontiers in Immunology 2024, 15 https://doi.org/10.3389/fimmu.2024.1337973
    7. Mikkel Haarslev Schröder Marqvorsen, Sivasinthujah Paramasivam, Ward Doelman, Antony John Fairbanks, Sander Izaäk van Kasteren. Efficient synthesis and enzymatic extension of an N -GlcNAz asparagine building block. Chemical Communications 2019, 55 (36) , 5287-5290. https://doi.org/10.1039/C9CC02051A
    8. Maksim V. Baranov, Frans Bianchi, Anastasiya Schirmacher, Melissa A.C. van Aart, Sjors Maassen, Elke M. Muntjewerff, Ilse Dingjan, Martin ter Beest, Martijn Verdoes, Samantha G.L. Keyser, Carolyn R. Bertozzi, Ulf Diederichsen, Geert van den Bogaart. The Phosphoinositide Kinase PIKfyve Promotes Cathepsin-S-Mediated Major Histocompatibility Complex Class II Antigen Presentation. iScience 2019, 11 , 160-177. https://doi.org/10.1016/j.isci.2018.12.015
    9. Brett J. Hos, Elena Tondini, Sander I. van Kasteren, Ferry Ossendorp. Approaches to Improve Chemically Defined Synthetic Peptide Vaccines. Frontiers in Immunology 2018, 9 https://doi.org/10.3389/fimmu.2018.00884
    10. Joanna B Pawlak, Sander I van Kasteren. Antigen Processing and Cross‐Presentation. 2017, 1-11. https://doi.org/10.1002/9780470015902.a0027590

    ACS Chemical Biology

    Cite this: ACS Chem. Biol. 2016, 11, 11, 3172–3178
    Click to copy citationCitation copied!
    https://doi.org/10.1021/acschembio.6b00498
    Published October 5, 2016
    Copyright © 2016 American Chemical Society

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