Neonatal Exhaled Breath Sampling for Infrared Spectroscopy: Biomarker AnalysisClick to copy article linkArticle link copied!
- Nadia FeddahiNadia FeddahiCenter for Translational and Neurobehavioural Sciences CTNBS, Department of Pediatrics I, Neonatology, University Hospital Essen, University of Duisburg-Essen, Hufelandstraße 55, Essen 45147, GermanyMore by Nadia Feddahi
- Lea HartmannLea HartmannCenter for Translational and Neurobehavioural Sciences CTNBS, Department of Pediatrics I, Neonatology, University Hospital Essen, University of Duisburg-Essen, Hufelandstraße 55, Essen 45147, GermanyMore by Lea Hartmann
- Ursula Felderhoff-MüserUrsula Felderhoff-MüserCenter for Translational and Neurobehavioural Sciences CTNBS, Department of Pediatrics I, Neonatology, University Hospital Essen, University of Duisburg-Essen, Hufelandstraße 55, Essen 45147, GermanyMore by Ursula Felderhoff-Müser
- Susmita RoySusmita RoyResearch Unit of the Buhl-Strohmaier Foundation for Cerebral Palsy and Pediatric Neuroorthopaedics, Department of Orthopaedics and Sports Orthopaedics, TUM School of Medicine and Health, University Hospital Rechts der Isar, Technical University of Munich, Ismaninger Straße 22, 81675 Munich, GermanyMore by Susmita Roy
- Renée LampeRenée LampeResearch Unit of the Buhl-Strohmaier Foundation for Cerebral Palsy and Pediatric Neuroorthopaedics, Department of Orthopaedics and Sports Orthopaedics, TUM School of Medicine and Health, University Hospital Rechts der Isar, Technical University of Munich, Ismaninger Straße 22, 81675 Munich, GermanyMarkus Würth Professorship, Technical University of Munich, Ismaninger Straße 22, 81675 Munich, GermanyMore by Renée Lampe
- Kiran Sankar Maiti*Kiran Sankar Maiti*Phone: +49 89 289 13438. Fax: +49 89 289 13416. E-mail: [email protected]TUM School of Natural Sciences, Department of Chemistry, Technical University of Munich, 85748 Garching, GermanyMax-Planck-Institut für Quantenoptik, Hans-Kopfermann-Straße 1, 85748 Garching, GermanyMore by Kiran Sankar Maiti
Abstract
Monitoring health conditions in neonates for early therapeutic intervention in case deviations from physiological conditions is crucial for their long-term development. Due to their immaturity preterm born neonates are dependent on particularly careful physical and neurological diagnostic methods. Ideally, these should be noninvasive, noncontact, and radiation free. Infrared spectroscopy was used to analyze exhaled breath from 71 neonates with a special emphasis on preterm infants, as a noninvasive, noncontact, and radiation-free diagnostic tool. Passive sample collection was performed by skilled clinicians. Depending on the mode of respiratory support of infants, four different sampling procedures were adapted to collect exhaled breath. With the aid of appropriate reference samples, infrared spectroscopy has successfully demonstrated its effectiveness in the analysis of breath samples of neonates. The discernible increase in concentrations of carbon dioxide, carbon monoxide, and methane in collected samples compared to reference samples served as compelling evidence of the presence of exhaled breath. With regard to technical hurdles and sample analysis, samples collected from neonates without respiratory support proved to be more advantageous compared to those obtained from intubated infants and those with CPAP (continuous positive airway pressure). The main obstacle lies in the significant dilution of exhaled breath in the case of neonates receiving respiratory support. Metabolic analysis of breath samples holds promise for the development of noninvasive biomarker-based diagnostics for both preterm and sick neonates provided an adequate amount of breath is collected.
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License Summary*
You are free to share(copy and redistribute) this article in any medium or format and to adapt(remix, transform, and build upon) the material for any purpose, even commercially within the parameters below:
Creative Commons (CC): This is a Creative Commons license.
Attribution (BY): Credit must be given to the creator.
*Disclaimer
This summary highlights only some of the key features and terms of the actual license. It is not a license and has no legal value. Carefully review the actual license before using these materials.
License Summary*
You are free to share(copy and redistribute) this article in any medium or format and to adapt(remix, transform, and build upon) the material for any purpose, even commercially within the parameters below:
Creative Commons (CC): This is a Creative Commons license.
Attribution (BY): Credit must be given to the creator.
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Introduction
Experimental Method
Sample Collection
Study Design
Neonates Breathing Spontaneously (S)
Neonates Requiring Incubator Care
Neonates on CPAP (Infant Flow) as Respiratory Support (CPAP)
Neonates on Invasive Ventilation (Draeger Babylog VN500, IT)
Sample Preparation
Spectroscopic Measurements
Spectroscopic Data Analysis
Results and Discussions
sampling methods | metabolites | ||||||
---|---|---|---|---|---|---|---|
carbon dioxide | carbon monoxide | methane | modified | ||||
detected | elevated | detected | elevated | methane | |||
spontaneous | 55 | 55 | 55 | 47 | 55 | 15 | |
incubator | CPAP | 15 | 15 | 15 | 11 | 15 | 2 |
Infantflow | 1 | 1 | 1 | 1 | 1 | 1 |
The elevation of absorption strength of metabolites was analyzed with respect to the corresponding reference spectra.
IR Spectra of Room Air
Identification of Breath of Neonates
Carbon Monoxide
Methane
Conclusions
Acknowledgments
R.L. acknowledges the funding from Buhl-Strohmaier and Würth Foundation. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript. K.S.M. acknowledges partial financial support from DFG. The authors thank all parents for their support of this study. The authors also thank Ferenc Krausz and Mihaela Žigman for their support with experimental facilities and ideas for the improvement of the study. Frank Fleischmann is acknowledged for technical support.
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- 48Roy, S.; Maiti, K. S. Structural sensitivity of CH vibrational band in methyl benzoate. Spectrochim. Acta Mol. Biomol. Spectrosc. 2018, 196, 289– 294, DOI: 10.1016/j.saa.2018.02.031Google ScholarThere is no corresponding record for this reference.
- 49Maiti, K. S. Ultrafast vibrational coupling between C–H and C = O band of cyclic amide 2-Pyrrolidinone revealed by 2DIR spectroscopy. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 2020, 228, 117749, DOI: 10.1016/j.saa.2019.117749Google ScholarThere is no corresponding record for this reference.
- 50Buchan, E.; Kelleher, L.; Clancy, M.; Stanley Rickard, J. J.; Oppenheimer, P. G. Spectroscopic molecular-fingerprint profiling of saliva. Anal. Chim. Acta 2021, 1185, 339074, DOI: 10.1016/j.aca.2021.339074Google Scholar50https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3MXitFant7rF&md5=0dfe105cec6afa4f3e29dc910f3435b7Spectroscopic molecular-fingerprint profiling of salivaBuchan, Emma; Kelleher, Liam; Clancy, Michael; Stanley Rickard, Jonathan James; Oppenheimer, Pola GoldbergAnalytica Chimica Acta (2021), 1185 (), 339074CODEN: ACACAM; ISSN:0003-2670. (Elsevier B.V.)Saliva anal. has been gaining interest as a potential non-invasive source of disease indicative biomarkers due to being a complex biofluid correlating with blood-based constituents on a mol. level. For saliva to cement its usage for anal. applications, it is paramount to gain underpinning mol. knowledge and establish a 'baseline' of the salivary compn. in healthy individuals as well as characterize how these factors are impacting its performance as potential anal. biofluid. Here, we have systematically studied the mol. spectral fingerprint of saliva, including the changes assocd. with gender, age, and time. Via hybrid artificial neural network algorithms and Raman spectroscopy, we have developed a non-destructive mol. profiling approach enabling the assessment of salivary spectral changes yielding the detn. of gender and age of the biofluid source. Our classification algorithm successfully identified the gender and age from saliva with high classification accuracy. Discernible spectral mol. 'barcodes' were subsequently constructed for each class and found to primarily stem from amino acid, protein, and lipid changes in saliva. This unique combination of Raman spectroscopy and advanced machine learning techniques lays the platform for a variety of applications in forensics and biosensing.
- 51Maiti, K. S. Two-dimensional Infrared Spectroscopy Reveals Better Insights of Structure and Dynamics of Protein. Molecules 2021, 26, 6893, DOI: 10.3390/molecules26226893Google ScholarThere is no corresponding record for this reference.
- 52Takamura, A.; Watanabe, K.; Akutsu, T.; Ozawa, T. Soft and Robust Identification of Body Fluid Using Fourier Transform Infrared Spectroscopy and Chemometric Strategies for Forensic Analysis. Sci. Rep. 2018, 8, 8459, DOI: 10.1038/s41598-018-26873-9Google Scholar52https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A280%3ADC%252BC1Mbis1Chsg%253D%253D&md5=9780ee2e4bb8ddb6b4af6641bd6ca8d3Soft and Robust Identification of Body Fluid Using Fourier Transform Infrared Spectroscopy and Chemometric Strategies for Forensic AnalysisTakamura Ayari; Watanabe Ken; Akutsu Tomoko; Takamura Ayari; Ozawa TakeakiScientific reports (2018), 8 (1), 8459 ISSN:.Body fluid (BF) identification is a critical part of a criminal investigation because of its ability to suggest how the crime was committed and to provide reliable origins of DNA. In contrast to current methods using serological and biochemical techniques, vibrational spectroscopic approaches provide alternative advantages for forensic BF identification, such as non-destructivity and versatility for various BF types and analytical interests. However, unexplored issues remain for its practical application to forensics; for example, a specific BF needs to be discriminated from all other suspicious materials as well as other BFs, and the method should be applicable even to aged BF samples. Herein, we describe an innovative modeling method for discriminating the ATR FT-IR spectra of various BFs, including peripheral blood, saliva, semen, urine and sweat, to meet the practical demands described above. Spectra from unexpected non-BF samples were efficiently excluded as outliers by adopting the Q-statistics technique. The robustness of the models against aged BFs was significantly improved by using the discrimination scheme of a dichotomous classification tree with hierarchical clustering. The present study advances the use of vibrational spectroscopy and a chemometric strategy for forensic BF identification.
- 53Apolonski, A.; Roy, S.; Lampe, R.; Sankar Maiti, K. Molecular identification of bio-fluids in gas phase using infrared spectroscopy. Appl. Opt. 2020, 59, E36– E41, DOI: 10.1364/AO.388362Google ScholarThere is no corresponding record for this reference.
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- 58Maiti, K. S.; Lewton, M.; Fill, E.; Apolonski, A. Sensitive spectroscopic breath analysis by water condensation. Journal of Breath Research 2018, 12, 046003, DOI: 10.1088/1752-7163/aad207Google ScholarThere is no corresponding record for this reference.
- 59Apolonski, A.; Maiti, K. S. Towards a standard operating procedure for revealing hidden volatile organic compounds in breath: the Fourier-transform IR spectroscopy case. Appl. Opt. 2021, 60, 4217– 4224, DOI: 10.1364/AO.421994Google ScholarThere is no corresponding record for this reference.
- 60Roy, S.; Maiti, K. S. Baseline correction for the infrared spectra of exhaled breath. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 2024, 318, 124473, DOI: 10.1016/j.saa.2024.124473Google ScholarThere is no corresponding record for this reference.
- 61Johnson, T. J.; Sams, R. L.; Sharpe, S. W. The PNNL quantitative infrared database for gas-phase sensing: a spectral library for environmental, hazmat, and public safety standoff detection. Chemical and Biological Point Sensors for Homeland Defense 2004, 159– 167, DOI: 10.1117/12.515604Google ScholarThere is no corresponding record for this reference.
- 62Gordon, I.E.; Rothman, L.S.; Hill, C.; Kochanov, R.V.; Tan, Y.; Bernath, P.F.; Birk, M.; Boudon, V.; Campargue, A.; Chance, K.V.; Drouin, B.J.; Flaud, J.-M.; Gamache, R.R.; Hodges, J.T.; Jacquemart, D.; Perevalov, V.I.; Perrin, A.; Shine, K.P.; Smith, M.-A.H.; Tennyson, J.; Toon, G.C.; Tran, H.; Tyuterev, V.G.; Barbe, A.; Csaszar, A.G.; Devi, V.M.; Furtenbacher, T.; Harrison, J.J.; Hartmann, J.-M.; Jolly, A.; Johnson, T.J.; Karman, T.; Kleiner, I.; Kyuberis, A.A.; Loos, J.; Lyulin, O.M.; Massie, S.T.; Mikhailenko, S.N.; Moazzen-Ahmadi, N.; Muller, H.S.P.; Naumenko, O.V.; Nikitin, A.V.; Polyansky, O.L.; Rey, M.; Rotger, M.; Sharpe, S.W.; Sung, K.; Starikova, E.; Tashkun, S.A.; Auwera, J. V.; Wagner, G.; Wilzewski, J.; Wcisło, P.; Yu, S.; Zak, E.J. The HITRAN2016 molecular spectroscopic database. J. Quant. Spectrosc. Radiat. Transfer 2017, 203, 3– 69, DOI: 10.1016/j.jqsrt.2017.06.038Google Scholar62https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC2sXhtlKqtLbP&md5=93638425d6455d66541f48987b374a51The HITRAN2016 molecular spectroscopic databaseGordon, I. E.; Rothman, L. S.; Hill, C.; Kochanov, R. V.; Tan, Y.; Bernath, P. F.; Birk, M.; Boudon, V.; Campargue, A.; Chance, K. V.; Drouin, B. J.; Flaud, J.-M.; Gamache, R. R.; Hodges, J. T.; Jacquemart, D.; Perevalov, V. I.; Perrin, A.; Shine, K. P.; Smith, M.-A. H.; Tennyson, J.; Toon, G. C.; Tran, H.; Tyuterev, V. G.; Barbe, A.; Csaszar, A. G.; Devi, V. M.; Furtenbacher, T.; Harrison, J. J.; Hartmann, J.-M.; Jolly, A.; Johnson, T. J.; Karman, T.; Kleiner, I.; Kyuberis, A. A.; Loos, J.; Lyulin, O. M.; Massie, S. T.; Mikhailenko, S. N.; Moazzen-Ahmadi, N.; Muller, H. S. P.; Naumenko, O. V.; Nikitin, A. V.; Polyansky, O. L.; Rey, M.; Rotger, M.; Sharpe, S. W.; Sung, K.; Starikova, E.; Tashkun, S. A.; Vander Auwera, J.; Wagner, G.; Wilzewski, J.; Wcislo, P.; Yu, S.; Zak, E. J.Journal of Quantitative Spectroscopy & Radiative Transfer (2017), 203 (), 3-69CODEN: JQSRAE; ISSN:0022-4073. (Elsevier Ltd.)This paper describes the contents of the 2016 edition of the HITRAN mol. spectroscopic compilation. The new edition replaces the previous HITRAN edition of 2012 and its updates during the intervening years. The HITRAN mol. absorption compilation is composed of five major components: the traditional line-by-line spectroscopic parameters required for high-resoln. radiative-transfer codes, IR absorption cross-sections for mols. not yet amenable to representation in a line-by-line form, collision-induced absorption data, aerosol indexes of refraction, and general tables such as partition sums that apply globally to the data. The new HITRAN is greatly extended in terms of accuracy, spectral coverage, addnl. absorption phenomena, added line-shape formalisms, and validity. Moreover, mols., isotopologues, and perturbing gases have been added that address the issues of atmospheres beyond the Earth. Of considerable note, exptl. IR cross-sections for almost 300 addnl. mols. important in different areas of atm. science have been added to the database. The compilation can be accessed through www.hitran.org. Most of the HITRAN data have now been cast into an underlying relational database structure that offers many advantages over the long-standing sequential text-based structure. The new structure empowers the user in many ways. It enables the incorporation of an extended set of fundamental parameters per transition, sophisticated line-shape formalisms, easy user-defined output formats, and very convenient searching, filtering, and plotting of data. A powerful application programming interface making use of structured query language (SQL) features for higher-level applications of HITRAN is also provided.
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- 65Quanjer, P.; Tammeling, G.; Cotes, J.; Pedersen, O.; Peslin, R.; Yernault, J.-C. Lung volumes and forced ventilatory flows. Eur. Respir. J. 1993, 6, 5– 40, DOI: 10.1183/09041950.005s1693Google Scholar65https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A280%3ADC%252BC2cvovV2hsw%253D%253D&md5=2c79a67dc047746b91a4f60d93647020Lung volumes and forced ventilatory flowsQuanjer P H; Tammeling G J; Cotes J E; Pedersen O F; Peslin R; Yernault J CThe European respiratory journal (1993), 6 Suppl 16 (), 5-40 ISSN:0903-1936.There is no expanded citation for this reference.
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- 67Haick, H.; Broza, Y. Y.; Mochalski, P.; Ruzsanyi, V.; Amann, A. Assessment, origin, and implementation of breath volatile cancer markers. Chem. Soc. Rev. 2014, 43, 1423– 1449, DOI: 10.1039/C3CS60329FGoogle Scholar67https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC2cXitFWhsbs%253D&md5=4dea834bfd526693655bea1a757fd2d7Assessment, origin, and implementation of breath volatile cancer markersHaick, Hossam; Broza, Yoav Y.; Mochalski, Pawel; Ruzsanyi, Vera; Amann, AntonChemical Society Reviews (2014), 43 (5), 1423-1449CODEN: CSRVBR; ISSN:0306-0012. (Royal Society of Chemistry)A review. A new non-invasive and potentially inexpensive frontier in the diagnosis of cancer relies on the detection of volatile org. compds. (VOCs) in exhaled breath samples. Breath can be sampled and analyzed in real-time, leading to fascinating and cost-effective clin. diagnostic procedures. Nevertheless, breath anal. is a very young field of research and faces challenges, mainly because the biochem. mechanisms behind the cancer-related VOCs are largely unknown. In this review, we present a list of 115 validated cancer-related VOCs published in the literature during the past decade, and classify them with respect to their "fat-to-blood" and "blood-to-air" partition coeffs. These partition coeffs. provide an estn. of the relative concns. of VOCs in alveolar breath, in blood and in the fat compartments of the human body. Addnl., we try to clarify controversial issues concerning possible exptl. malpractice in the field, and propose ways to translate the basic science results as well as the mechanistic understanding to tools (sensors) that could serve as point-of-care diagnostics of cancer. We end this review with a conclusion and a future perspective.
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- 21Patel, R. M.; Rysavy, M. A.; Bell, E. F.; Tyson, J. E. Survival of Infants Born at Periviable Gestational Ages. Clinics in Perinatology 2017, 44, 287– 303, DOI: 10.1016/j.clp.2017.01.009There is no corresponding record for this reference.
- 22Maiti, K. S.; Lewton, M.; Fill, E.; Apolonski, A. Human beings as islands of stability: Monitoring body states using breath profiles. Sci. Rep. 2019, 9, 16167, DOI: 10.1038/s41598-019-51417-0There is no corresponding record for this reference.
- 23Qiu, S.; Cai, Y.; Yao, H.; Lin, C.; Xie, Y.; Tang, S.; Zhang, A.; Small molecule metabolites: discovery of biomarkers and therapeutic targets. Sig. Transduct. Target Ther. 2023, 8 DOI: 10.1038/s41392-023-01399-3 .There is no corresponding record for this reference.
- 24Shirasu, M.; Touhara, K. The scent of disease: volatile organic compounds of the human body related to disease and disorder. Journal of Biochemistry 2011, 150, 257, DOI: 10.1093/jb/mvr09024https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC3MXhtFShtbrK&md5=b81e99e5ccc77171c2ed0e07ddbfb488The scent of disease: volatile organic compounds of the human body related to disease and disorderShirasu, Mika; Touhara, KazushigeJournal of Biochemistry (2011), 150 (3), 257-266CODEN: JOBIAO; ISSN:0021-924X. (Oxford University Press)A review. Hundreds of volatile org. compds. (VOCs) are emitted from the human body, and the components of VOCs usually reflect the metabolic condition of an individual. Therefore, contracting an infectious or metabolic disease often results in a change in body odor. Recent progresses in anal. techniques allow rapid analyses of VOCs derived from breath, blood, skin and urine. Disease-specific VOCs can be used as diagnostic olfactory biomarkers of infectious diseases, metabolic diseases, genetic disorders and other kinds of diseases. Elucidation of pathophysiol. mechanisms underlying prodn. of disease-specific VOCs may provide novel insights into therapeutic approaches for treatments for various diseases. This review summarizes the current knowledge on chem. and clin. aspects of body-derived VOCs, and provides a brief outlook at the future of olfactory diagnosis.
- 25Drabińska, N.; Flynn, C.; Ratcliffe, N.; Belluomo, I. A literature survey of all volatiles from healthy human breath and bodily fluids: the human volatilome. Journal of Breath Research 2021, 15, 034001, DOI: 10.1088/1752-7163/abf1d0There is no corresponding record for this reference.
- 26Metzler, D. E. Biochemistry: The Chemical Reactions of Living Cells; Academic Press: New York, 2003.There is no corresponding record for this reference.
- 27Ahern, K. Biochemistry and Molecular Biology: How Life Works; Teaching Company, LLC: Chantilly, VA, 2019.There is no corresponding record for this reference.
- 28Huber, M.; Kepesidis, K. V.; Voronina, L.; Bozic, M.; Trubetskov, M.; Harbeck, N.; Krausz, F.; Zigman, M. Stability of person-specific blood-based infrared molecular fingerprints opens up prospects for health monitoring. Nat. Commun. 2021, 12, 1511, DOI: 10.1038/s41467-021-21668-528https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3MXmt1alsLs%253D&md5=ea338a6ba4107472f52d394bbdf33185Stability of person-specific blood-based infrared molecular fingerprints opens up prospects for health monitoringHuber, Marinus; Kepesidis, Kosmas V.; Voronina, Liudmila; Bozic, Masa; Trubetskov, Michael; Harbeck, Nadia; Krausz, Ferenc; Zigman, MihaelaNature Communications (2021), 12 (1), 1511CODEN: NCAOBW; ISSN:2041-1723. (Nature Research)Health state transitions are reflected in characteristic changes in the mol. compn. of biofluids. Detecting these changes in parallel, across a broad spectrum of mol. species, could contribute to the detection of abnormal physiologies. Fingerprinting of biofluids by IR vibrational spectroscopy offers that capacity. Whether its potential for health monitoring can indeed be exploited critically depends on how stable IR mol. fingerprints (IMFs) of individuals prove to be over time. Here we report a proof-of-concept study that addresses this question. Using Fourier-transform IR spectroscopy, we have fingerprinted blood serum and plasma samples from 31 healthy, non-symptomatic individuals, who were sampled up to 13 times over a period of 7 wk and again after 6 mo. The measurements were performed directly on liq. serum and plasma samples, yielding a time- and cost-effective workflow and a high degree of reproducibility. The resulting IMFs were found to be highly stable over clin. relevant time scales. Single measurements yielded a multiplicity of person-specific spectral markers, allowing individual mol. phenotypes to be detected and followed over time. This previously unknown temporal stability of individual biochem. fingerprints forms the basis for future applications of blood-based IR spectral fingerprinting as a multiomics-based mode of health monitoring.
- 29Maiti, K. S.; Fill, E.; Strittmatter, F.; Volz, Y.; Sroka, R.; Apolonski, A. Towards reliable diagnostics of prostate cancer via breath. Sci. Rep. 2021, 11, 18381, DOI: 10.1038/s41598-021-96845-zThere is no corresponding record for this reference.
- 30Maiti, K. S.; Fill, E.; Strittmatter, F.; Volz, Y.; Sroka, R.; Apolonski, A. Standard operating procedure to reveal prostate cancer specific volatile organic molecules by infrared spectroscopy. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 2024, 304, 123266, DOI: 10.1016/j.saa.2023.123266There is no corresponding record for this reference.
- 31Gowda, G. N.; Zhang, S.; Gu, H.; Asiago, V.; Shanaiah, N.; Raftery, D. Metabolomics-based methods for early disease diagnostics. Expert Review of Molecular Diagnostics 2008, 8, 617– 633, DOI: 10.1586/14737159.8.5.61731https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BD1cXhtFSms7jP&md5=cf77c8f0f22defc10c0f0943150bcdb4Metabolomics-based methods for early disease diagnosticsGowda, Ga nagana; Zhang, Shucha; Gu, Haiwei; Asiago, Vincent; Shanaiah, Narasimhamurthy; Raftery, DanielExpert Review of Molecular Diagnostics (2008), 8 (5), 617-633CODEN: ERMDCW; ISSN:1473-7159. (Expert Reviews Ltd.)A review. The emerging field of metabolomics, in which a large no. of small-mol. metabolites from body fluids or tissues are detected quant. in a single step, promises immense potential for early diagnosis, therapy monitoring and for understanding the pathogenesis of many diseases. Metabolomics methods are mostly focused on the information-rich anal. techniques of NMR spectroscopy and mass spectrometry (MS). Anal. of the data from these high-resoln. methods using advanced chemometric approaches provides a powerful platform for translational and clin. research and diagnostic applications. In this review, the current trends and recent advances in NMR- and MS-based metabolomics are described with a focus on the development of advanced NMR and MS methods, improved multivariate statistical data anal. and recent applications in the area of cancer, diabetes, inborn errors of metab. and cardiovascular diseases.
- 32Beauchamp, J. D.; Davis, C.; Pleil, J. D. Breathborne Biomarkers and the Human Volatilome; Elsevier: New Amsterdam, 2020.There is no corresponding record for this reference.
- 33Pauling, L.; Robinson, A. B.; Teranishi, R.; Cary, P. Quantitative Analysis of Urine Vapor and Breath by Gas-Liquid Partition Chromatography. Proc. Natl. Acad. Sci. U. S. A. 1971, 68, 2374– 2376, DOI: 10.1073/pnas.68.10.237433https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADyaE3MXlsVygsLc%253D&md5=f6a160ff50711caad4e11e59ebccdc8cQuantitative analysis of urine vapor and breath by gas-liquid partition chromatographyPauling, Linus; Robinson, Arthur B.; Teranishi, Roy; Cary, PaulProceedings of the National Academy of Sciences of the United States of America (1971), 68 (10), 2374-6CODEN: PNASA6; ISSN:0027-8424.When a human being is placed for several days on a completely define diet, consisting almost entirely of small mols. that are absorbed from the stomach into the blood, intestinal flora disappear because of lack of nutrition. By this technique, the compn. of body fluids can be made const. (std. deviation about 10%) after a few days, permitting significant quant. analyses to be performed. A method of temp.-programmed gas chromatog. was developed for this purpose. It permits the quant. detn. of about 250 substances in a sample of breath, and of about 280 substances in a sample of urine vapor. The technique should be useful in the application of the principles of orthomol. medicine.
- 34Sukul, P.; Schubert, J. K.; Zanaty, K.; Trefz, P.; Sinha, A.; Kamysek, S.; Miekisch, W.; Exhaled breath compositions under varying respiratory rhythms reflects ventilatory variations: translating breathomics towards respiratory medicine. Sci. Rep. 2020, 10 DOI: 10.1038/s41598-020-70993-0 .There is no corresponding record for this reference.
- 35Decrue, F.; Singh, K. D.; Gisler, A.; Awchi, M. Combination of Exhaled Breath Analysis with Parallel Lung Function and FeNO Measurements in Infants. Anal. Chem. 2021, 93, 15579– 15583, DOI: 10.1021/acs.analchem.1c02036There is no corresponding record for this reference.
- 36Romijn, M.; van Kaam, A. H.; Fenn, D.; Bos, L. D. Exhaled Volatile Organic Compounds for Early Prediction of Bronchopulmonary Dysplasia in Infants Born Preterm. Journal of Pediatrics 2023, 257, 113368, DOI: 10.1016/j.jpeds.2023.02.014There is no corresponding record for this reference.
- 37Ophelders, D. R. M. G.; Boots, A. W.; Hütten, M. C.; Al-Nasiry, S.; Jellema, R. K.; Spiller, O. B.; van Schooten, F.-J.; Smolinska, A.; Wolfs, T. G. A. M. Screening of Chorioamnionitis Using Volatile Organic Compound Detection in Exhaled Breath: A Pre-clinical Proof of Concept Study. Front. Pediatr. 2021, 9, 488, DOI: 10.3389/fped.2021.617906There is no corresponding record for this reference.
- 38Maiti, K. S. Non-Invasive Disease Specific Biomarker Detection Using Infrared Spectroscopy: A Review. Molecules 2023, 28, 2320, DOI: 10.3390/molecules28052320There is no corresponding record for this reference.
- 39Pham, Y. L.; Beauchamp, J. Breath Biomarkers in Diagnostic Applications. Molecules 2021, 26, 5514, DOI: 10.3390/molecules26185514There is no corresponding record for this reference.
- 40Li, C.; Chu, S.; Tan, S.; Yin, X.; Jiang, Y.; Dai, X.; Gong, X.; Fang, X.; Tian, D.; Towards Higher Sensitivity of Mass Spectrometry: A Perspective From the Mass Analyzers. Front. Chem. 2021, 9 DOI: 10.3389/fchem.2021.813359 .There is no corresponding record for this reference.
- 41Hanna, G. B.; Boshier, P. R.; Markar, S. R.; Romano, A. Accuracy and Methodologic Challenges of Volatile Organic Compound–Based Exhaled Breath Tests for Cancer Diagnosis. JAMA Oncology 2019, 5, e182815 DOI: 10.1001/jamaoncol.2018.2815There is no corresponding record for this reference.
- 42Karakaya, D.; Ulucan, O.; Turkan, M. Electronic Nose and Its Applications: A Survey. Int. J. Autom. Comput. 2020, 17, 179– 209, DOI: 10.1007/s11633-019-1212-9There is no corresponding record for this reference.
- 43Ye, Z.; Liu, Y.; Li, Q. Recent Progress in Smart Electronic Nose Technologies Enabled with Machine Learning Methods. Sensors 2021, 21, 7620, DOI: 10.3390/s21227620There is no corresponding record for this reference.
- 44Kwon, O. S.; Song, H. S.; Park, S. J.; Lee, S. H.; An, J. H. An Ultrasensitive, Selective, Multiplexed Superbioelectronic Nose That Mimics the Human Sense of Smell. Nano Lett. 2015, 15, 6559– 6567, DOI: 10.1021/acs.nanolett.5b0228644https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC2MXhsVWms7nM&md5=a6396d41dd9721285c8d386db3f0dc71An Ultrasensitive, Selective, Multiplexed Superbioelectronic Nose That Mimics the Human Sense of SmellKwon, Oh Seok; Song, Hyun Seok; Park, Seon Joo; Lee, Seung Hwan; An, Ji Hyun; Park, Jin Wook; Yang, Heehong; Yoon, Hyeonseok; Bae, Joonwon; Park, Tai Hyun; Jang, JyongsikNano Letters (2015), 15 (10), 6559-6567CODEN: NALEFD; ISSN:1530-6984. (American Chemical Society)Human sensory-mimicking systems, such as electronic brains, tongues, skin, and ears, have been promoted for use in improving social welfare. However, no significant achievements have been made in mimicking the human nose due to the complexity of olfactory sensory neurons. Combinational coding of human olfactory receptors (hORs) is essential for odorant discrimination in mixts., and the development of hOR-combined multiplexed systems has progressed slowly. Here, the authors report the first demonstration of an artificial multiplexed superbioelectronic nose (MSB-nose) that mimics the human olfactory sensory system, leading to high-performance odorant discriminatory ability in mixts. Specifically, portable MSB-noses were constructed using highly uniform graphene micropatterns (GMs) that were conjugated with two different hORs, which were employed as transducers in a liq.-ion gated field-effect transistor (FET). Field-induced signals from the MSB-nose were monitored and provided high sensitivity and selectivity toward target odorants (min. detectable level: 0.1 fM). More importantly, the potential of the MSB-nose as a tool to encode hOR combinations was demonstrated using principal component anal.
- 45Di Natale, C.; Paolesse, R.; Martinelli, E.; Capuano, R. Solid-state gas sensors for breath analysis: A review. Anal. Chim. Acta 2014, 824, 1– 17, DOI: 10.1016/j.aca.2014.03.01445https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC2cXlt1Sgt7c%253D&md5=3537987fc5dfd5f2bd6f2ab3fc7cbd25Solid-state gas sensors for breath analysis: A reviewDi Natale, Corrado; Paolesse, Roberto; Martinelli, Eugenio; Capuano, RosamariaAnalytica Chimica Acta (2014), 824 (), 1-17CODEN: ACACAM; ISSN:0003-2670. (Elsevier B.V.)A review. The anal. of volatile compds. is an efficient method to appraise information about the chem. compn. of liqs. and solids. This principle is applied to several practical applications, such as food anal. where many important features (e.g. freshness) can be directly inferred from the anal. of volatile compds. The same approach can also be applied to a human body where the volatile compds., collected from the skin, the breath or in the headspace of fluids, might contain information that could be used to diagnose several kinds of diseases. In particular, breath is widely studied and many diseases can be potentially detected from breath anal.The most fascinating property of breath anal. is the non-invasiveness of the sample collection. Solid-state sensors are considered the natural complement to breath anal., matching the non-invasiveness with typical sensor features such as low-cost, easiness of use, portability, and the integration with the information networks. Sensors based breath anal. is then expected to dramatically extend the diagnostic capabilities enabling the screening of large populations for the early diagnosis of pathologies.In the last years there has been an increased attention to the development of sensors specifically aimed to this purpose. These investigations involve both specific sensors designed to detect individual compds. and non-specific sensors, operated in array configurations, aimed at clustering subjects according to their health conditions. In this paper, the recent significant applications of these sensors to breath anal. are reviewed and discussed.
- 46Wilson, E.; Decius, J.; Cross, P. Molecular Vibrations: The Theory of Infrared and Raman Vibrational Spectra. Dover Books on Chemistry Series; Dover Publications: New York, 1980.There is no corresponding record for this reference.
- 47Maiti, K. S. Vibrational spectroscopy of Methyl benzoate. Phys. Chem. Chem. Phys. 2015, 17, 19735– 19744, DOI: 10.1039/C5CP02281AThere is no corresponding record for this reference.
- 48Roy, S.; Maiti, K. S. Structural sensitivity of CH vibrational band in methyl benzoate. Spectrochim. Acta Mol. Biomol. Spectrosc. 2018, 196, 289– 294, DOI: 10.1016/j.saa.2018.02.031There is no corresponding record for this reference.
- 49Maiti, K. S. Ultrafast vibrational coupling between C–H and C = O band of cyclic amide 2-Pyrrolidinone revealed by 2DIR spectroscopy. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 2020, 228, 117749, DOI: 10.1016/j.saa.2019.117749There is no corresponding record for this reference.
- 50Buchan, E.; Kelleher, L.; Clancy, M.; Stanley Rickard, J. J.; Oppenheimer, P. G. Spectroscopic molecular-fingerprint profiling of saliva. Anal. Chim. Acta 2021, 1185, 339074, DOI: 10.1016/j.aca.2021.33907450https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BB3MXitFant7rF&md5=0dfe105cec6afa4f3e29dc910f3435b7Spectroscopic molecular-fingerprint profiling of salivaBuchan, Emma; Kelleher, Liam; Clancy, Michael; Stanley Rickard, Jonathan James; Oppenheimer, Pola GoldbergAnalytica Chimica Acta (2021), 1185 (), 339074CODEN: ACACAM; ISSN:0003-2670. (Elsevier B.V.)Saliva anal. has been gaining interest as a potential non-invasive source of disease indicative biomarkers due to being a complex biofluid correlating with blood-based constituents on a mol. level. For saliva to cement its usage for anal. applications, it is paramount to gain underpinning mol. knowledge and establish a 'baseline' of the salivary compn. in healthy individuals as well as characterize how these factors are impacting its performance as potential anal. biofluid. Here, we have systematically studied the mol. spectral fingerprint of saliva, including the changes assocd. with gender, age, and time. Via hybrid artificial neural network algorithms and Raman spectroscopy, we have developed a non-destructive mol. profiling approach enabling the assessment of salivary spectral changes yielding the detn. of gender and age of the biofluid source. Our classification algorithm successfully identified the gender and age from saliva with high classification accuracy. Discernible spectral mol. 'barcodes' were subsequently constructed for each class and found to primarily stem from amino acid, protein, and lipid changes in saliva. This unique combination of Raman spectroscopy and advanced machine learning techniques lays the platform for a variety of applications in forensics and biosensing.
- 51Maiti, K. S. Two-dimensional Infrared Spectroscopy Reveals Better Insights of Structure and Dynamics of Protein. Molecules 2021, 26, 6893, DOI: 10.3390/molecules26226893There is no corresponding record for this reference.
- 52Takamura, A.; Watanabe, K.; Akutsu, T.; Ozawa, T. Soft and Robust Identification of Body Fluid Using Fourier Transform Infrared Spectroscopy and Chemometric Strategies for Forensic Analysis. Sci. Rep. 2018, 8, 8459, DOI: 10.1038/s41598-018-26873-952https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A280%3ADC%252BC1Mbis1Chsg%253D%253D&md5=9780ee2e4bb8ddb6b4af6641bd6ca8d3Soft and Robust Identification of Body Fluid Using Fourier Transform Infrared Spectroscopy and Chemometric Strategies for Forensic AnalysisTakamura Ayari; Watanabe Ken; Akutsu Tomoko; Takamura Ayari; Ozawa TakeakiScientific reports (2018), 8 (1), 8459 ISSN:.Body fluid (BF) identification is a critical part of a criminal investigation because of its ability to suggest how the crime was committed and to provide reliable origins of DNA. In contrast to current methods using serological and biochemical techniques, vibrational spectroscopic approaches provide alternative advantages for forensic BF identification, such as non-destructivity and versatility for various BF types and analytical interests. However, unexplored issues remain for its practical application to forensics; for example, a specific BF needs to be discriminated from all other suspicious materials as well as other BFs, and the method should be applicable even to aged BF samples. Herein, we describe an innovative modeling method for discriminating the ATR FT-IR spectra of various BFs, including peripheral blood, saliva, semen, urine and sweat, to meet the practical demands described above. Spectra from unexpected non-BF samples were efficiently excluded as outliers by adopting the Q-statistics technique. The robustness of the models against aged BFs was significantly improved by using the discrimination scheme of a dichotomous classification tree with hierarchical clustering. The present study advances the use of vibrational spectroscopy and a chemometric strategy for forensic BF identification.
- 53Apolonski, A.; Roy, S.; Lampe, R.; Sankar Maiti, K. Molecular identification of bio-fluids in gas phase using infrared spectroscopy. Appl. Opt. 2020, 59, E36– E41, DOI: 10.1364/AO.388362There is no corresponding record for this reference.
- 54Mochalski, P.; King, J.; Unterkofler, K.; Amann, A. Stability of selected volatile breath constituents in Tedlar, Kynar and Flexfilm sampling bags. Analyst 2013, 138, 1405– 1418, DOI: 10.1039/c2an36193kThere is no corresponding record for this reference.
- 55Baker, J. The Machine in the Nursery: Incubator Technology and the Origins of Newborn Intensive Care; Johns Hopkins Introductory Studies in the History Series; Johns Hopkins University Press: Baltimore, MD, 1996.There is no corresponding record for this reference.
- 56Kidman, A. M.; Manley, B. J.; Boland, R. A.; Malhotra, A. Higher versus lower nasal continuous positive airway pressure for extubation of extremely preterm infants in Australia (ÉCLAT): a multicentre, randomised, superiority trial. Lancet Child & Adolescent Health 2023, 7, 844– 851, DOI: 10.1016/S2352-4642(23)00235-3There is no corresponding record for this reference.
- 57Rocha, G.; Soares, P.; Gonçalves, A.; Silva, A. I. Respiratory Care for the Ventilated Neonate. Canadian Respiratory Journal 2018, 2018, 1– 12, DOI: 10.1155/2018/7472964There is no corresponding record for this reference.
- 58Maiti, K. S.; Lewton, M.; Fill, E.; Apolonski, A. Sensitive spectroscopic breath analysis by water condensation. Journal of Breath Research 2018, 12, 046003, DOI: 10.1088/1752-7163/aad207There is no corresponding record for this reference.
- 59Apolonski, A.; Maiti, K. S. Towards a standard operating procedure for revealing hidden volatile organic compounds in breath: the Fourier-transform IR spectroscopy case. Appl. Opt. 2021, 60, 4217– 4224, DOI: 10.1364/AO.421994There is no corresponding record for this reference.
- 60Roy, S.; Maiti, K. S. Baseline correction for the infrared spectra of exhaled breath. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 2024, 318, 124473, DOI: 10.1016/j.saa.2024.124473There is no corresponding record for this reference.
- 61Johnson, T. J.; Sams, R. L.; Sharpe, S. W. The PNNL quantitative infrared database for gas-phase sensing: a spectral library for environmental, hazmat, and public safety standoff detection. Chemical and Biological Point Sensors for Homeland Defense 2004, 159– 167, DOI: 10.1117/12.515604There is no corresponding record for this reference.
- 62Gordon, I.E.; Rothman, L.S.; Hill, C.; Kochanov, R.V.; Tan, Y.; Bernath, P.F.; Birk, M.; Boudon, V.; Campargue, A.; Chance, K.V.; Drouin, B.J.; Flaud, J.-M.; Gamache, R.R.; Hodges, J.T.; Jacquemart, D.; Perevalov, V.I.; Perrin, A.; Shine, K.P.; Smith, M.-A.H.; Tennyson, J.; Toon, G.C.; Tran, H.; Tyuterev, V.G.; Barbe, A.; Csaszar, A.G.; Devi, V.M.; Furtenbacher, T.; Harrison, J.J.; Hartmann, J.-M.; Jolly, A.; Johnson, T.J.; Karman, T.; Kleiner, I.; Kyuberis, A.A.; Loos, J.; Lyulin, O.M.; Massie, S.T.; Mikhailenko, S.N.; Moazzen-Ahmadi, N.; Muller, H.S.P.; Naumenko, O.V.; Nikitin, A.V.; Polyansky, O.L.; Rey, M.; Rotger, M.; Sharpe, S.W.; Sung, K.; Starikova, E.; Tashkun, S.A.; Auwera, J. V.; Wagner, G.; Wilzewski, J.; Wcisło, P.; Yu, S.; Zak, E.J. The HITRAN2016 molecular spectroscopic database. J. Quant. Spectrosc. Radiat. Transfer 2017, 203, 3– 69, DOI: 10.1016/j.jqsrt.2017.06.03862https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A528%3ADC%252BC2sXhtlKqtLbP&md5=93638425d6455d66541f48987b374a51The HITRAN2016 molecular spectroscopic databaseGordon, I. E.; Rothman, L. S.; Hill, C.; Kochanov, R. V.; Tan, Y.; Bernath, P. F.; Birk, M.; Boudon, V.; Campargue, A.; Chance, K. V.; Drouin, B. J.; Flaud, J.-M.; Gamache, R. R.; Hodges, J. T.; Jacquemart, D.; Perevalov, V. I.; Perrin, A.; Shine, K. P.; Smith, M.-A. H.; Tennyson, J.; Toon, G. C.; Tran, H.; Tyuterev, V. G.; Barbe, A.; Csaszar, A. G.; Devi, V. M.; Furtenbacher, T.; Harrison, J. J.; Hartmann, J.-M.; Jolly, A.; Johnson, T. J.; Karman, T.; Kleiner, I.; Kyuberis, A. A.; Loos, J.; Lyulin, O. M.; Massie, S. T.; Mikhailenko, S. N.; Moazzen-Ahmadi, N.; Muller, H. S. P.; Naumenko, O. V.; Nikitin, A. V.; Polyansky, O. L.; Rey, M.; Rotger, M.; Sharpe, S. W.; Sung, K.; Starikova, E.; Tashkun, S. A.; Vander Auwera, J.; Wagner, G.; Wilzewski, J.; Wcislo, P.; Yu, S.; Zak, E. J.Journal of Quantitative Spectroscopy & Radiative Transfer (2017), 203 (), 3-69CODEN: JQSRAE; ISSN:0022-4073. (Elsevier Ltd.)This paper describes the contents of the 2016 edition of the HITRAN mol. spectroscopic compilation. The new edition replaces the previous HITRAN edition of 2012 and its updates during the intervening years. The HITRAN mol. absorption compilation is composed of five major components: the traditional line-by-line spectroscopic parameters required for high-resoln. radiative-transfer codes, IR absorption cross-sections for mols. not yet amenable to representation in a line-by-line form, collision-induced absorption data, aerosol indexes of refraction, and general tables such as partition sums that apply globally to the data. The new HITRAN is greatly extended in terms of accuracy, spectral coverage, addnl. absorption phenomena, added line-shape formalisms, and validity. Moreover, mols., isotopologues, and perturbing gases have been added that address the issues of atmospheres beyond the Earth. Of considerable note, exptl. IR cross-sections for almost 300 addnl. mols. important in different areas of atm. science have been added to the database. The compilation can be accessed through www.hitran.org. Most of the HITRAN data have now been cast into an underlying relational database structure that offers many advantages over the long-standing sequential text-based structure. The new structure empowers the user in many ways. It enables the incorporation of an extended set of fundamental parameters per transition, sophisticated line-shape formalisms, easy user-defined output formats, and very convenient searching, filtering, and plotting of data. A powerful application programming interface making use of structured query language (SQL) features for higher-level applications of HITRAN is also provided.
- 63Kramida, A.; Ralchenko, Yu.; Reader, J.; and NIST ASD Team NIST Atomic Spectra Database (ver. 5.7.1), [Online]. Available: https://physics.nist.gov/asd [2017, April 9]. National Institute of Standards and Technology: Gaithersburg, MD, 2019.There is no corresponding record for this reference.
- 64Gelin, M. F.; Blokhin, A. P.; Ostrozhenkova, E.; Apolonski, A.; Maiti, K. S. Theory helps experiment to reveal VOCs in human breath. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 2021, 258, 119785, DOI: 10.1016/j.saa.2021.119785There is no corresponding record for this reference.
- 65Quanjer, P.; Tammeling, G.; Cotes, J.; Pedersen, O.; Peslin, R.; Yernault, J.-C. Lung volumes and forced ventilatory flows. Eur. Respir. J. 1993, 6, 5– 40, DOI: 10.1183/09041950.005s169365https://chemport.cas.org/services/resolver?origin=ACS&resolution=options&coi=1%3ACAS%3A280%3ADC%252BC2cvovV2hsw%253D%253D&md5=2c79a67dc047746b91a4f60d93647020Lung volumes and forced ventilatory flowsQuanjer P H; Tammeling G J; Cotes J E; Pedersen O F; Peslin R; Yernault J CThe European respiratory journal (1993), 6 Suppl 16 (), 5-40 ISSN:0903-1936.There is no expanded citation for this reference.
- 66Cheng, W.; Dan, L.; Deng, X.; Feng, J.; Global Monthly Gridded Atmospheric Carbon Dioxide Concentrations under the Historical and Future Scenarios; Scientific Data, 2022, 9.There is no corresponding record for this reference.
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