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Glucose Modulation of Glucokinase Activation by Small Molecules
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    Glucose Modulation of Glucokinase Activation by Small Molecules
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    Biochemical Pharmacology, La Jolla Laboratories, Pfizer Global Research and Development, San Diego, California 92121
    †This work was supported by the Pfizer Global Research and Development La Jolla Postdoctoral Program.
    * To whom correspondence should be addressed. Phone: 858-526-4922 . Fax: 858-526-4240. E-mail: [email protected]
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    Biochemistry

    Cite this: Biochemistry 2008, 47, 17, 5028–5036
    Click to copy citationCitation copied!
    https://doi.org/10.1021/bi702516y
    Published March 28, 2008
    Copyright © 2008 American Chemical Society

    Abstract

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    Small molecule activators of glucokinase (GK) were used in kinetic and equilibrium binding studies to probe the biochemical basis for their allosteric effects. These small molecules decreased the glucose K0.5 (∼1 mM vs ∼8 mM) and the glucose cooperativity (Hill coefficient of 1.2 vs 1.7) and lowered the kcat to various degrees (62–95% of the control activity). These activators relieved GK’s inhibition from glucokinase regulatory protein (GKRP) in a glucose-dependent manner and activated GK to the same extent as control reactions in the absence of GKRP. In equilibrium binding studies, the intrinsic glucose affinity to the activator-bound enzyme was determined and demonstrated a 700-fold increase relative to the apoenzyme. This is consistent with a reduction in apparent glucose KD and the steady-state parameter K0.5 as a result of enzyme equilibrium shifting to the activator-bound form. The binding of small molecules to GK was dependent on glucose, consistent with the structural evidence for an allosteric binding site which is present in the glucose-induced, active enzyme form of GK and absent in the inactive apoenzyme [Kamata et al. (2004) Structure 12, 429–438]. A mechanistic model that brings together the kinetic and structural data is proposed which allows qualitative and quantitative analysis of the glucose-dependent GK regulation by small molecules. The regulation of GK activation by glucose may have an important implication for the discovery and design of GK activators as potential antidiabetic agents.

    Copyright © 2008 American Chemical Society

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    Supporting Information

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    Figures showing the representative traces for the DSC experiments, data for KD,GKA determinations by ITC and SPA, a table of kinetic parameters regarding GKRP inhibition, representative structures of previously published GKAs, appendices showing derivations of eqs 5 and 6, and details regarding the kinetic simulation. This material is available free of charge via the Internet at http://pubs.acs.org.

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    Cited By

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    This article is cited by 28 publications.

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    2. Joseph M. Bowler, Katherine L. Hervert, Mark L. Kearley, and Brian G. Miller . Small-Molecule Allosteric Activation of Human Glucokinase in the Absence of Glucose. ACS Medicinal Chemistry Letters 2013, 4 (7) , 580-584. https://doi.org/10.1021/ml400061x
    3. Mathias Antoine, Jean A. Boutin and Gilles Ferry. Binding Kinetics of Glucose and Allosteric Activators to Human Glucokinase Reveal Multiple Conformational States. Biochemistry 2009, 48 (23) , 5466-5482. https://doi.org/10.1021/bi900374c
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    16. Zhiguang Zhu, Fangfang Sun, Xiaozhou Zhang, Y.-H. Percival Zhang. Deep oxidation of glucose in enzymatic fuel cells through a synthetic enzymatic pathway containing a cascade of two thermostable dehydrogenases. Biosensors and Bioelectronics 2012, 36 (1) , 110-115. https://doi.org/10.1016/j.bios.2012.04.001
    17. B. Zelent, C. Buettger, J. Grimsby, R. Sarabu, J.M. Vanderkooi, A.J. Wand, F.M. Matschinsky. Thermal stabilty of glucokinase (GK) as influenced by the substrate glucose, an allosteric glucokinase activator drug (GKA) and the osmolytes glycerol and urea. Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 2012, 1824 (5) , 769-784. https://doi.org/10.1016/j.bbapap.2012.03.003
    18. Simone Baltrusch, Heike Schmitt, Anke Brix, Sara Langer, Sigurd Lenzen. Additive activation of glucokinase by the bifunctional enzyme 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase and the chemical activator LY2121260. Biochemical Pharmacology 2012, 83 (9) , 1300-1306. https://doi.org/10.1016/j.bcp.2012.01.020
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    20. Martin Lang, Markus H.-J. Seifert, Kristina K. Wolf, Andrea Aschenbrenner, Roland Baumgartner, Tanja Wieber, Viola Trentinaglia, Marcus Blisse, Nobumitsu Tajima, Tokuyuki Yamashita, Daniel Vitt, Hitoshi Noda. Discovery and hit-to-lead optimization of novel allosteric glucokinase activators. Bioorganic & Medicinal Chemistry Letters 2011, 21 (18) , 5417-5422. https://doi.org/10.1016/j.bmcl.2011.06.128
    21. . Allosteric Modulation of Enzyme Activity. 2011, 199-217. https://doi.org/10.1002/9781118084410.ch9
    22. Franz M. Matschinsky, Bogumil Zelent, Nicolai M. Doliba, Klaus H. Kaestner, Jane M. Vanderkooi, Joseph Grimsby, Steven J. Berthel, Ramakanth Sarabu. Research and Development of Glucokinase Activators for Diabetes Therapy: Theoretical and Practical Aspects. 2011, 357-401. https://doi.org/10.1007/978-3-642-17214-4_15
    23. Julie A Zorn, James A Wells. Turning enzymes ON with small molecules. Nature Chemical Biology 2010, 6 (3) , 179-188. https://doi.org/10.1038/nchembio.318
    24. Manojit Pal. Recent advances in glucokinase activators for the treatment of type 2 diabetes. Drug Discovery Today 2009, 14 (15-16) , 784-792. https://doi.org/10.1016/j.drudis.2009.05.013
    25. Franz M. Matschinsky. Assessing the potential of glucokinase activators in diabetes therapy. Nature Reviews Drug Discovery 2009, 8 (5) , 399-416. https://doi.org/10.1038/nrd2850
    26. Jefferson W Tilley. Glucokinase activators: Novo Nordisk's WO2008084044 and Array Biopharma's WO2008091770. Expert Opinion on Therapeutic Patents 2009, 19 (4) , 549-553. https://doi.org/10.1517/13543770902735824
    27. Anthony C. Bishop, Vincent L. Chen. Brought to life: targeted activation of enzyme function with small molecules. Journal of Chemical Biology 2009, 2 (1) , 1-9. https://doi.org/10.1007/s12154-008-0012-4
    28. Oliver Anderka, Janina Boyken, Ursula Aschenbach, Andreas Batzer, Oliver Boscheinen, Dieter Schmoll. Biophysical Characterization of the Interaction between Hepatic Glucokinase and Its Regulatory Protein. Journal of Biological Chemistry 2008, 283 (46) , 31333-31340. https://doi.org/10.1074/jbc.M805434200

    Biochemistry

    Cite this: Biochemistry 2008, 47, 17, 5028–5036
    Click to copy citationCitation copied!
    https://doi.org/10.1021/bi702516y
    Published March 28, 2008
    Copyright © 2008 American Chemical Society

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