Influence of Sulfoxide Group Placement on Polypeptide Conformational StabilityClick to copy article linkArticle link copied!
- Eric G. GharakhanianEric G. GharakhanianDepartment of Chemistry and Biochemistry, University of California Los Angeles, Los Angeles, California 90095, United StatesMore by Eric G. Gharakhanian
- Ehab BahrunEhab BahrunDepartment of Chemistry and Biochemistry, University of California Los Angeles, Los Angeles, California 90095, United StatesMore by Ehab Bahrun
- Timothy J. Deming*Timothy J. Deming*[email protected]Department of Chemistry and Biochemistry and Department of Bioengineering, University of California Los Angeles, Los Angeles, California 90095, United StatesMore by Timothy J. Deming
Abstract

The synthesis of a homologous series containing five new nonionic sulfoxide containing polypeptides was described. Sulfoxide groups bestowed water solubility for all homologues, which allowed their use as a model for study of helix–coil transitions in water while avoiding contributions from charged groups or phase separation. Polypeptides were found to adopt chain conformations in water that were dependent on distance of sulfoxides from chain backbones, overall side-chain lengths, and solvent. These results allow preparation of polypeptide segments with different chain conformations without changing chemical functionality for potential use in structural studies and functional applications.
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(20)
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(6)
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(5)
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(5)
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(24)
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(11)
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(41)
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(41)
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(31)
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(14)
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(13)
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(20)
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(8)
, 1445-1449. https://doi.org/10.1039/C9PY01857C
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