logo
CONTENT TYPES

Figure 1Loading Img

Two Modifications Formed by “Sulflower” C16S8 Molecules, Their Study by XRD and Optical Spectroscopy (Raman, IR, UV−Vis) Methods

View Author Information
A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilova street, 119991 Moscow, Russia, Department of Chemistry, Moscow State University, Leninskiye Gory, 119992 Moscow, Russia, and Department of Natural Sciences, New Mexico Highlands University, Las Vegas, New Mexico 87701
* Corresponding author. E-mail: [email protected]
†A. N. Nesmeyanov Institute of Organelement Compounds, Russian Academy of Sciences.
‡Moscow State University.
§New Mexico Highlands University.
Cite this: J. Phys. Chem. A 2008, 112, 43, 10949–10961
Publication Date (Web):October 7, 2008
https://doi.org/10.1021/jp806134u
Copyright © 2008 American Chemical Society
Article Views
1344
Altmetric
-
Citations
LEARN ABOUT THESE METRICS
Read OnlinePDF (2 MB)
Supporting Info (1)»

Abstract

Sublimation of sulflower, octathio[8]circulene C16S8 (1), on heating under high vacuum (∼10−5 Torr) leads to successive formation of two modifications: a white film (1W) and a red polycrystalline solid (1R). When kept at room temperature for several weeks, 1W spontaneously turns pink, reflecting the monotropic phase transition 1W1R. The accurate molecular and crystal structure of 1R has been studied using low-temperature (100 K) high-resolution single crystal X-ray analysis. The C16S8 molecule in crystal is strictly planar with nearly equalized bonds of each type (C−C, C−S, and C═C). The point symmetry group of the free molecule is D8h, and the crystal space group is P21/n. These data allowed group-theoretical analysis of vibrational normal modes to be accomplished. Investigation of the charge density distribution of 1R including Bader’s AIM approach has revealed rather strong intermolecular S···S, S···C, and C···C interactions of charge transfer and π-stacking types with overall lattice energy of 28.5 kcal/mol. The charge transfer due to the S···S interactions is the reason for the red coloration of 1R. The latter is reflected by its UV−vis spectrum exhibiting absorption bands in the visible region which are absent from that of 1W. Both modifications were studied comparatively by vibrational (Raman, IR) and electronic spectroscopies as well as XRD powder diffraction. All the results obtained are fully consistent and show that 1W is much less ordered than 1R with significantly weakened intermolecular interactions. Rationalizing of these results has led to an idea that 1W could be soluble, in contrast to 1R. Indeed, 1W appeared soluble in common solvents; this finding opens the way to the study of the chemistry of 1 and investigation of its electrooptical properties.

Supporting Information

ARTICLE SECTIONS
Jump To

Tables giving bond lengths and angles, topological parameters in critical points (3,−1), atomic charges, and volumes, parameters of selected diffraction peaks in the powder XRD patterns, and detailed analysis of the vibrational spectrum on the basis of computed and experimental data are presented. This material is available free of charge via the Internet at http://pubs.acs.org. Crystallographic data (excluding structure factors) for the structures reported in this paper have been deposited with the Cambridge Crystallographic Data Center as supplementary no. CCDC-685932. Copies of the data can be obtained free of charge on application to CCDC, 12 Union Road, Cambridge CB2 1EZ U.K. (Fax: (international) +44-1223/336-033; E-mail: deposit @ccdc.cam.ac.uk).

Terms & Conditions

Most electronic Supporting Information files are available without a subscription to ACS Web Editions. Such files may be downloaded by article for research use (if there is a public use license linked to the relevant article, that license may permit other uses). Permission may be obtained from ACS for other uses through requests via the RightsLink permission system: http://pubs.acs.org/page/copyright/permissions.html.

Cited By


This article is cited by 45 publications.

  1. Sergey A. Shteingolts, Robert R. Fayzullin. X-ray Charge Density Study of the Drug Methimazole with Z′ = 2: Differences in the Electronic Structure of the Thiourea Core due to Crystal Packing Effects. Crystal Growth & Design 2020, 20 (3) , 2074-2090. https://doi.org/10.1021/acs.cgd.9b01715
  2. Shohei Kato, Shuhei Akahori, Yuma Serizawa, Xu Lin, Mitsuaki Yamauchi, Shiki Yagai, Tsuneaki Sakurai, Wakana Matsuda, Shu Seki, Hiroshi Shinokubo, Yoshihiro Miyake. Systematic Synthesis of Tetrathia[8]circulenes: The Influence of Peripheral Substituents on the Structures and Properties in Solution and Solid States. The Journal of Organic Chemistry 2020, 85 (1) , 62-69. https://doi.org/10.1021/acs.joc.9b01655
  3. Qing Zhang, Zexing Cao. Persulfurated Coronene and Its Chalcogenide Analogues: Insight into Effects of Peripheral Substitution. The Journal of Physical Chemistry A 2019, 123 (47) , 10273-10280. https://doi.org/10.1021/acs.jpca.9b08401
  4. Denisa Cagardová, Ján Matúška, Peter Poliak, Vladimír Lukeš. Design of Novel Generations of Planar Sunflower Molecules: Theoretical Comparative Study of Electronic Structure and Charge Transport Characteristics. The Journal of Physical Chemistry C 2019, 123 (37) , 22752-22766. https://doi.org/10.1021/acs.jpcc.9b05598
  5. Shuhei Akahori, Hayato Sakai, Taku Hasobe, Hiroshi Shinokubo, and Yoshihiro Miyake . Synthesis and Photodynamics of Tetragermatetrathia[8]circulene. Organic Letters 2018, 20 (1) , 304-307. https://doi.org/10.1021/acs.orglett.7b03764
  6. Yuya Nagata, Shohei Kato, Yoshihiro Miyake, and Hiroshi Shinokubo . Synthesis of Tetraaza[8]circulenes from Tetrathia[8]circulenes through an SNAr-Based Process. Organic Letters 2017, 19 (10) , 2718-2721. https://doi.org/10.1021/acs.orglett.7b01074
  7. Takuya Fujimoto, Michio M. Matsushita, and Kunio Awaga . Ionic-Liquid Component Dependence of Carrier Injection and Mobility for Electric-Double-Layer Organic Thin-Film Transistors. The Journal of Physical Chemistry C 2012, 116 (8) , 5240-5245. https://doi.org/10.1021/jp2122642
  8. Vasily A. Migulin, Michael M. Krayushkin, Valery A. Barachevsky, Olga I. Kobeleva, Tatyana M. Valova, and Konstantin A. Lyssenko . Synthesis and Characterization of Nonsymmetric Cyclopentene-Based Dithienylethenes. The Journal of Organic Chemistry 2012, 77 (1) , 332-340. https://doi.org/10.1021/jo201966g
  9. I. S. Bushmarinov, I. V. Fedyanin, K. A. Lyssenko, V. L. Lapteva, S. A. Pisarev, V. A. Palyulin, N. S. Zefirov, and M. Yu. Antipin . The “Hockey Sticks” Effect Revisited: The Conformational and Electronic Properties of 3,7-Dithia-1,5-diazabicyclo[3.3.1]nonane from the QTAIM Perspective. The Journal of Physical Chemistry A 2011, 115 (45) , 12738-12745. https://doi.org/10.1021/jp203730b
  10. Brian Napolion, Frank Hagelberg, Ming-Ju Huang, John D. Watts, T. M. Simeon, Derricka Vereen, Wilbur L. Walters, and Quinton L. Williams . Theoretical Investigation into the Structural, Thermochemical, and Electronic Properties of the Decathio[10]circulene. The Journal of Physical Chemistry A 2011, 115 (31) , 8682-8690. https://doi.org/10.1021/jp1122773
  11. Andrzej Rajca, Makoto Miyasaka, Shuzhang Xiao, Przemysław J. Boratyński, Maren Pink and Suchada Rajca . Intramolecular Cyclization of Thiophene-Based [7]Helicenes to Quasi-[8]Circulenes. The Journal of Organic Chemistry 2009, 74 (23) , 9105-9111. https://doi.org/10.1021/jo902030u
  12. Vladimir I. Smirnov, Lidiya M. Sinegovskaya, Vladimir A. Shagun, Valentina S. Nikonova, Nikolai A. Korchevin, Igor B. Rozentsveig. 4,5,9,10-Tetrahydrocycloocta[1,2-c; 5,8-c′]dithiophene from bis(2-chloropropen-3-yl)sulfide: spectral and theoretical monitoring of the formation. Journal of Sulfur Chemistry 2021, 42 (3) , 241-250. https://doi.org/10.1080/17415993.2020.1844703
  13. Shuhei Akahori, Takahiro Sasamori, Hiroshi Shinokubo, Yoshihiro Miyake. Enthalpically and Entropically Favorable Self‐Assembly: Synthesis of C 4 h ‐Symmetric Tetraazatetrathia[8]circulenes by Regioselective Introduction of Pyridine Rings. Chemistry – A European Journal 2021, 27 (18) , 5675-5682. https://doi.org/10.1002/chem.202005077
  14. Nataliya N. Karaush-Karmazin, Gleb V. Baryshnikov, Artem V. Kuklin, Diana I. Saykova, Hans Ågren, Boris F. Minaev. Impact of molecular and packing structure on the charge-transport properties of hetero[8]circulenes. Journal of Materials Chemistry C 2021, 9 (4) , 1451-1466. https://doi.org/10.1039/D0TC03674A
  15. Yoshihiro Miyake, Hiroshi Shinokubo. Hetero[8]circulenes: synthetic progress and intrinsic properties. Chemical Communications 2020, 56 (100) , 15605-15614. https://doi.org/10.1039/D0CC06495E
  16. Hiroyasu Murase, Yuya Nagata, Shuhei Akahori, Hiroshi Shinokubo, Yoshihiro Miyake. Aggregation‐Induced Emission in Tetrathia[8]circulene Octaoxides via Restriction of the Dynamic Motion of their Negatively Curved π‐Frameworks. Chemistry – An Asian Journal 2020, 15 (22) , 3873-3877. https://doi.org/10.1002/asia.202001129
  17. Zandria Lamprecht, Frederick P. Malan, Israel Fernández, Simon Lotz, Daniela I. Bezuidenhout. Chelated Fischer carbene complexes of annulated thiophenes: synthesis, structure and electrochemistry. Dalton Transactions 2020, 49 (43) , 15339-15354. https://doi.org/10.1039/D0DT03298K
  18. G. V. Baryshnikov, R. R. Valiev, V. N. Cherepanov, N. N. Karaush-Karmazin, V. A. Minaeva, B. F. Minaev, H. Ågren. Aromaticity and photophysics of tetrasila- and tetragerma-annelated tetrathienylenes as new representatives of the hetero[8]circulene family. Physical Chemistry Chemical Physics 2019, 21 (18) , 9246-9254. https://doi.org/10.1039/C9CP01608B
  19. Valentina Minaeva, Nataliya Karaush-Karmazin, Gleb Baryshnikov, Boris Minaev. A complete characterization of vibrational IR and Raman spectra of the highly-symmetrical octathia[8]circulene. Vibrational Spectroscopy 2019, 100 , 107-116. https://doi.org/10.1016/j.vibspec.2018.11.006
  20. Tatyana N. Gribanova, Ruslan M. Minyaev, Vladimir I. Minkin, Alexander I. Boldyrev. Metalcarbonyl analogues of annelated cyclooctatetraene and cyclodecapentaene derivatives with a planar core cycle: a quantum chemical study. Physical Chemistry Chemical Physics 2018, 20 (44) , 27830-27837. https://doi.org/10.1039/C8CP05444D
  21. A. I. Konovalov, I. S. Antipin, V. A. Burilov, T. I. Madzhidov, A. R. Kurbangalieva, A. V. Nemtarev, S. E. Solovieva, I. I. Stoikov, V. A. Mamedov, L. Ya. Zakharova, E. L. Gavrilova, O. G. Sinyashin, I. A. Balova, A. V. Vasilyev, I. G. Zenkevich, M. Yu. Krasavin, M. A. Kuznetsov, A. P. Molchanov, M. S. Novikov, V. A. Nikolaev, L. L. Rodina, A. F. Khlebnikov, I. P. Beletskaya, S. Z. Vatsadze, S. P. Gromov, N. V. Zyk, A. T. Lebedev, D. A. Lemenovskii, V. S. Petrosyan, V. G. Nenaidenko, V. V. Negrebetskii, Yu. I. Baukov, T. A. Shmigol’, A. A. Korlyukov, A. S. Tikhomirov, A. E. Shchekotikhin, V. F. Traven’, L. G. Voskresenskii, F. I. Zubkov, O. A. Golubchikov, A. S. Semeikin, D. B. Berezin, P. A. Stuzhin, V. D. Filimonov, E. A. Krasnokutskaya, A. Yu. Fedorov, A. V. Nyuchev, V. Yu. Orlov, R. S. Begunov, A. I. Rusakov, A. V. Kolobov, E. R. Kofanov, O. V. Fedotova, A. Yu. Egorova, V. N. Charushin, O. N. Chupakhin, Yu. N. Klimochkin, V. A. Osyanin, A. N. Reznikov, A. S. Fisyuk, G. P. Sagitullina, A. V. Aksenov, N. A. Aksenov, M. K. Grachev, V. I. Maslennikova, M. P. Koroteev, A. K. Brel’, S. V. Lisina, S. M. Medvedeva, Kh. S. Shikhaliev, G. A. Suboch, M. S. Tovbis, L. M. Mironovich, S. M. Ivanov, S. V. Kurbatov, M. E. Kletskii, O. N. Burov, K. I. Kobrakov, D. N. Kuznetsov. Modern Trends of Organic Chemistry in Russian Universities. Russian Journal of Organic Chemistry 2018, 54 (2) , 157-371. https://doi.org/10.1134/S107042801802001X
  22. I. S. Antipin, M. A. Kazymova, M. A. Kuznetsov, A. V. Vasilyev, M. A. Ishchenko, A. A. Kiryushkin, L. M. Kuznetsova, S. V. Makarenko, V. A. Ostrovskii, M. L. Petrov, O. V. Solod, Yu. G. Trishin, I. P. Yakovlev, V. G. Nenaidenko, E. K. Beloglazkina, I. P. Beletskaya, Yu. A. Ustynyuk, P. A. Solov’ev, I. V. Ivanov, E. V. Malina, N. V. Sivova, V. V. Negrebetskii, Yu. I. Baukov, N. A. Pozharskaya, V. F. Traven’, A. E. Shchekotikhin, A. V. Varlamov, T. N. Borisova, Yu. A. Lesina, E. A. Krasnokutskaya, S. I. Rogozhnikov, S. N. Shurov, T. P. Kustova, M. V. Klyuev, O. G. Khelevina, P. A. Stuzhin, A. Yu. Fedorov, A. V. Gushchin, V. A. Dodonov, A. V. Kolobov, V. V. Plakhtinskii, V. Yu. Orlov, A. P. Kriven’ko, O. V. Fedotova, N. V. Pchelintseva, V. N. Charushin, O. N. Chupakhin, Yu. N. Klimochkin, A. Yu. Klimochkina, V. N. Kuryatnikov, Yu. A. Malinovskaya, A. S. Levina, O. E. Zhuravlev, L. I. Voronchikhina, A. S. Fisyuk, A. V. Aksenov, N. A. Aksenov, I. V. Aksenova. Organic chemistry. History and mutual relations of universities of Russia. Russian Journal of Organic Chemistry 2017, 53 (9) , 1275-1437. https://doi.org/10.1134/S1070428017090019
  23. Yuma Serizawa, Shuhei Akahori, Shohei Kato, Hayato Sakai, Taku Hasobe, Yoshihiro Miyake, Hiroshi Shinokubo. Synthesis of Tetrasilatetrathia[8]circulenes by a Fourfold Intramolecular Dehydrogenative Silylation of C−H Bonds. Chemistry - A European Journal 2017, 23 (29) , 6948-6952. https://doi.org/10.1002/chem.201700729
  24. Tatyana N. Gribanova, Ruslan M. Minyaev, Vladimir I. Minkin. Stabilization of non-standard conformations of the annulene rings in cyclobutadiene-framed [n]annulenes (n = 8, 10, 12, 14) and their beryllium sandwich-like complexes: a quantum chemical study. Structural Chemistry 2016, 27 (4) , 1229-1240. https://doi.org/10.1007/s11224-016-0748-3
  25. G V Baryshnikov, B F Minaev, V A Minaeva. Electronic structure, aromaticity and spectra of hetero[8]circulenes. Russian Chemical Reviews 2015, 84 (5) , 455-484. https://doi.org/10.1070/RCR4445
  26. W. D. Xiao, Y. Y. Zhang, L. Tao, K. Aït-Mansour, K. Y. Chernichenko, V. G. Nenajdenko, P. Ruffieux, S. X. Du, H.-J. Gao, R. Fasel. Impact of heterocirculene molecular symmetry upon two-dimensional crystallization. Scientific Reports 2015, 4 (1) https://doi.org/10.1038/srep05415
  27. Shohei Kato, Yuma Serizawa, Daisuke Sakamaki, Shu Seki, Yoshihiro Miyake, Hiroshi Shinokubo. Diversity-oriented synthesis of tetrathia[8]circulenes by sequential C–H borylation and annulation. Chemical Communications 2015, 51 (95) , 16944-16947. https://doi.org/10.1039/C5CC06921A
  28. N. N. Karaush, B. F. Minaev, G. V. Baryshnikov, V. A. Minaeva. A comparative study of the electronic structure and spectra of tetraoxa[8]circulene and octathio[8]circulene. Optics and Spectroscopy 2014, 116 (1) , 33-46. https://doi.org/10.1134/S0030400X13120084
  29. Gleb V. Baryshnikov, Boris F. Minaev, Valentina A. Minaeva, Valentine G. Nenajdenko. Single crystal architecture and absorption spectra of octathio[8]circulene and sym-tetraselenatetrathio[8]circulene: QTAIM and TD-DFT approach. Journal of Molecular Modeling 2013, 19 (10) , 4511-4519. https://doi.org/10.1007/s00894-013-1962-1
  30. N. G. Naumov, A. A. Korlyukov, D. A. Piryazev, A. V. Virovets, V. E. Fedorov. High-precision X-ray diffraction data, experimental and theoretical study of 2H-MoS2. Russian Chemical Bulletin 2013, 62 (8) , 1852-1857. https://doi.org/10.1007/s11172-013-0266-z
  31. Gleb V. Baryshnikov, Boris F. Minaev, Michael Pittelkow, Christian B. Nielsen, Roberto Salcedo. Nucleus-independent chemical shift criterion for aromaticity in π-extended tetraoxa[8]circulenes. Journal of Molecular Modeling 2013, 19 (2) , 847-850. https://doi.org/10.1007/s00894-012-1617-7
  32. T. K. Dickens, R. B. Mallion. π-Electron ring-currents and bond-currents in [10,5]-Coronene and related structures conforming to the ‘Annulene-Within-an-Annulene’ model. Physical Chemistry Chemical Physics 2013, 15 (21) , 8245. https://doi.org/10.1039/c3cp00053b
  33. Takuya Fujimoto, Kunio Awaga. Electric-double-layer field-effect transistors with ionic liquids. Physical Chemistry Chemical Physics 2013, 15 (23) , 8983. https://doi.org/10.1039/c3cp50755f
  34. V. G. Nenajdenko, E. S. Balenkova, K. Y. Chernichenko, S. S. Vshivenko. Synthesis of annulated oligothiophenes. Russian Chemical Bulletin 2012, 61 (7) , 1456-1462. https://doi.org/10.1007/s11172-012-0188-1
  35. V. G. Nenajdenko, E. S. Balenkova, N. A. Emelyanov. Synthesis of dithienopyrrole derivatives. Russian Chemical Bulletin 2012, 61 (7) , 1463-1468. https://doi.org/10.1007/s11172-012-0189-0
  36. Valentina A. Minaeva, Boris F. Minaev, Gleb V. Baryshnikov, Hans Ågren, Michael Pittelkow. Experimental and theoretical study of IR and Raman spectra of tetraoxa[8]circulenes. Vibrational Spectroscopy 2012, 61 , 156-166. https://doi.org/10.1016/j.vibspec.2012.02.005
  37. Konstantin A. Lyssenko. Analysis of supramolecular architectures: beyond molecular packing diagrams. Mendeleev Communications 2012, 22 (1) , 1-7. https://doi.org/10.1016/j.mencom.2012.01.001
  38. Xiao-Dan Tang, Yi Liao, Hong-Ze Gao, Yun Geng, Zhong-Min Su. Theoretical study of the bridging effect on the charge carrier transport properties of cyclooctatetrathiophene and its derivatives. Journal of Materials Chemistry 2012, 22 (14) , 6907. https://doi.org/10.1039/c2jm14871d
  39. Konstantin Chernichenko, Nikolai Emelyanov, Ilya Gridnev, Valentine G. Nenajdenko. Unusual thiophilic ring-opening of fused oligothiophenes with organolithium reagents. Tetrahedron 2011, 67 (36) , 6812-6818. https://doi.org/10.1016/j.tet.2011.06.082
  40. Paulina M. Dominiak, Enrique Espinosa, János G. Ángyán. Intermolecular Interaction Energies from Experimental Charge Density Studies. 2011,,, 387-433. https://doi.org/10.1007/978-90-481-3836-4_11
  41. Takuya Fujimoto, Michio M. Matsushita, Kunio Awaga. Dual-gate field-effect transistors of octathio[8]circulene thin-films with ionic liquid and SiO2 gate dielectrics. Applied Physics Letters 2010, 97 (12) , 123303. https://doi.org/10.1063/1.3491807
  42. Takuya Fujimoto, Michio M. Matsushita, Kunio Awaga. Electrochemical field-effect transistors of octathio[8]circulene robust thin films with ionic liquids. Chemical Physics Letters 2009, 483 (1-3) , 81-83. https://doi.org/10.1016/j.cplett.2009.10.050
  43. Juan Aragó, Pedro M. Viruela, Enrique Ortí. From linear quaterthiophene to sulflower: A comparative theoretical study. Journal of Molecular Structure: THEOCHEM 2009, 912 (1-3) , 27-31. https://doi.org/10.1016/j.theochem.2009.03.021
  44. K. A. Lyssenko, P. Yu. Barzilovich, Yu. V. Nelyubina, E. A. Astaf’ev, M. Yu. Antipin, S. M. Aldoshin. Charge transfer and hydrogen bond energy in glycinium salts. Russian Chemical Bulletin 2009, 58 (1) , 31-40. https://doi.org/10.1007/s11172-009-0005-7
  45. Sasmita Mohakud, Swapan K. Pati. Large carrier mobilities in octathio[8]circulene crystals: a theoretical study. Journal of Materials Chemistry 2009, 19 (25) , 4356. https://doi.org/10.1039/b901014a

Pair your accounts.

Export articles to Mendeley

Get article recommendations from ACS based on references in your Mendeley library.

Pair your accounts.

Export articles to Mendeley

Get article recommendations from ACS based on references in your Mendeley library.

You’ve supercharged your research process with ACS and Mendeley!

STEP 1:
Click to create an ACS ID

Please note: If you switch to a different device, you may be asked to login again with only your ACS ID.

Please note: If you switch to a different device, you may be asked to login again with only your ACS ID.

Please note: If you switch to a different device, you may be asked to login again with only your ACS ID.

MENDELEY PAIRING EXPIRED
Your Mendeley pairing has expired. Please reconnect

This website uses cookies to improve your user experience. By continuing to use the site, you are accepting our use of cookies. Read the ACS privacy policy.

CONTINUE