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Proteomic Analysis of Exosomes from Human Neural Stem Cells by Flow Field-Flow Fractionation and Nanoflow Liquid Chromatography−Tandem Mass Spectrometry

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Department of Chemistry, Yonsei University, Seoul, 120-749, Korea, and Center for Genomics and Proteomics, Lee Gil Ya Cancer and Diabetes Center, Gachon University of Medicine and Science, Incheon, Korea
* To whom correspondence should be addressed. Myeong Hee Moon, Department of Chemistry, Yonsei University, Seoul, 120-749, South Korea. Phone, 82 2 2123 5634; fax, 82 2 364 7050; e-mail, [email protected]
†Yonsei University.
‡Gachon University of Medicine and Science.
Cite this: J. Proteome Res. 2008, 7, 8, 3475–3480
Publication Date (Web):June 21, 2008
https://doi.org/10.1021/pr800225z
Copyright © 2008 American Chemical Society

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    Abstract

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    Exosomes, small membrane vesicles secreted by a multitude of cell types, are involved in a wide range of physiological roles such as intercellular communication, membrane exchange between cells, and degradation as an alternative to lysosomes. Because of the small size of exosomes (30−100 nm) and the limitations of common separation procedures including ultracentrifugation and flow cytometry, size-based fractionation of exosomes has been challenging. In this study, we used flow field-flow fractionation (FlFFF) to fractionate exosomes according to differences in hydrodynamic diameter. The exosome fractions collected from FlFFF runs were examined by transmission electron microscopy (TEM) to morphologically confirm their identification as exosomes. Exosomal lysates of each fraction were digested and analyzed using nanoflow LC-ESI-MS-MS for protein identification. FIFFF, coupled with mass spectrometry, allows nanoscale size-based fractionation of exosomes and is more applicable to primary cells and stem cells since it requires much less starting material than conventional gel-based separation, in-gel digestion and the MS-MS method.

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