Substituent Effects in the Binding of Alkali Metal Ions to Pyridines Studied by Threshold Collision-Induced Dissociation and ab Initio Theory: The Aminopyridines
Abstract
Threshold collision-induced dissociation of M+(x-aminopyridine) with xenon is studied using guided ion beam mass spectrometry. M+ include the following alkali metal ions: Li+, Na+, and K+. All three structural isomers are examined, x = ortho, meta, and para. In all cases, the primary product corresponds to endothermic loss of the intact x-aminopyridine molecule, with minor production of MXe+ formed by ligand exchange. The cross section thresholds are interpreted to yield zero and 298 K bond dissociation energies for M+−x-aminopyridine after accounting for the effects of multiple ion-molecule collisions, internal energy of the reactant ions, and dissociation lifetimes. Ab initio calculations at the MP2(full)/6-31G* level of theory are used to determine the structures of these complexes and provide molecular constants necessary for the thermodynamic analysis of the experimental data. Theoretical bond dissociation energies are determined from single point calculations at the MP2(full)/6-311+G(2d,2p) level using the MP2(full)/6-31G* optimized geometries. Excellent agreement between theory and experiment is found for the Na+ and K+ systems, whereas the theoretical bond dissociation energies to Li+ systems are systematically low but still within experimental error. The measured bond energies are compared among the systems examined here, and to the analogous methyl-substituted systems examined in a previous study, to determine the influence of the position and the nature of the substituent on the binding and factors that control the strength of such binding.
Cited By
This article is cited by 36 publications.
- M. T. Rodgers , P. B. Armentrout . Cationic Noncovalent Interactions: Energetics and Periodic Trends. Chemical Reviews 2016, 116 (9) , 5642-5687. https://doi.org/10.1021/acs.chemrev.5b00688
- C. A. Austin and M. T. Rodgers . Alkali Metal Cation–Hexacyclen Complexes: Effects of Alkali Metal Cation Size on the Structure and Binding Energy. The Journal of Physical Chemistry A 2014, 118 (29) , 5488-5500. https://doi.org/10.1021/jp502275q
- Yu Chen, M. T. Rodgers. Structural and Energetic Effects in the Molecular Recognition of Acetylated Amino Acids by 18-Crown-6. Journal of the American Society for Mass Spectrometry 2012, 23 (11) , 2020-2030. https://doi.org/10.1007/s13361-012-0466-z
- Yu Chen and M. T. Rodgers . Structural and Energetic Effects in the Molecular Recognition of Amino Acids by 18-Crown-6. Journal of the American Chemical Society 2012, 134 (13) , 5863-5875. https://doi.org/10.1021/ja211021h
- Yu Chen and M. T. Rodgers . Structural and Energetic Effects in the Molecular Recognition of Protonated Peptidomimetic Bases by 18-Crown-6. Journal of the American Chemical Society 2012, 134 (4) , 2313-2324. https://doi.org/10.1021/ja2102345
- A. L. Heaton and P. B. Armentrout. Experimental and Theoretical Studies of Sodium Cation Interactions with d-Arabinose, Xylose, Glucose, and Galactose. The Journal of Physical Chemistry A 2008, 112 (41) , 10156-10167. https://doi.org/10.1021/jp804113q
- A. L. Heaton and P. B. Armentrout. Experimental and Theoretical Studies of Potassium Cation Interactions with the Acidic Amino Acids and Their Amide Derivatives. The Journal of Physical Chemistry B 2008, 112 (38) , 12056-12065. https://doi.org/10.1021/jp802427n
- A. L. Heaton,, R. M. Moision, and, P. B. Armentrout. Experimental and Theoretical Studies of Sodium Cation Interactions with the Acidic Amino Acids and Their Amide Derivatives. The Journal of Physical Chemistry A 2008, 112 (15) , 3319-3327. https://doi.org/10.1021/jp711649g
- R. M. Moision, P. B. Armentrout. An electrospray ionization source for thermochemical investigation with the guided ion beam mass spectrometer. Journal of the American Society for Mass Spectrometry 2007, 18 (6) , 1124-1134. https://doi.org/10.1016/j.jasms.2007.03.011
- N. S. Rannulu,, R. Amunugama,, Zhibo Yang, and, M. T. Rodgers. Influence of s and d Orbital Occupation on the Binding of Metal Ions to Imidazole. The Journal of Physical Chemistry A 2004, 108 (30) , 6385-6396. https://doi.org/10.1021/jp048500s
- Simon Petrie. Chemistry in Stringland: One-Dimensional Complexes of Main-Group Metal Ions with the Ligands NC2nX (X = N, CH; n = 0, 1, 2, 3). The Journal of Physical Chemistry A 2003, 107 (48) , 10441-10449. https://doi.org/10.1021/jp0361226
- Hai-Chuan Liu,, Shihe Yang,, Xin-Hao Zhang, and, Yun-Dong Wu. Unusual Chemistry of the Complex Mg•+(2-Fluoropyridine) Activated by the Photoexcitation of Mg•+. Journal of the American Chemical Society 2003, 125 (40) , 12351-12357. https://doi.org/10.1021/ja036476a
- R. Amunugama and, M. T. Rodgers. Influence of Substituents on Cation−π Interactions. 2. Absolute Binding Energies of Alkali Metal Cation−Fluorobenzene Complexes Determined by Threshold Collision-Induced Dissociation and Theoretical Studies. The Journal of Physical Chemistry A 2002, 106 (39) , 9092-9103. https://doi.org/10.1021/jp020459a
- R. M. Moision and, P. B. Armentrout. Experimental and Theoretical Dissection of Sodium Cation/Glycine Interactions. The Journal of Physical Chemistry A 2002, 106 (43) , 10350-10362. https://doi.org/10.1021/jp0216373
- R. Amunugama and, M. T. Rodgers. Influence of Substituents on Cation−π Interactions. 1. Absolute Binding Energies of Alkali Metal Cation−Toluene Complexes Determined by Threshold Collision-Induced Dissociation and Theoretical Studies. The Journal of Physical Chemistry A 2002, 106 (22) , 5529-5539. https://doi.org/10.1021/jp014307b
- Y. Chu, Z. Yang, M. T. Rodgers. Solvation of copper ions by acetone. Structures and sequential binding energies of Cu+(acetone)x, x = 1–4 from collision-induced dissociation and theoretical studies. Journal of the American Society for Mass Spectrometry 2002, 13 (5) , 453-468. https://doi.org/10.1016/S1044-0305(02)00355-0
- H. Huang and, M. T. Rodgers. Sigma versus Pi Interactions in Alkali Metal Ion Binding to Azoles: Threshold Collision-Induced Dissociation and ab Initio Theory Studies. The Journal of Physical Chemistry A 2002, 106 (16) , 4277-4289. https://doi.org/10.1021/jp013630b
- M. T. Rodgers and, P. B. Armentrout. Influence of d Orbital Occupation on the Binding of Metal Ions to Adenine. Journal of the American Chemical Society 2002, 124 (11) , 2678-2691. https://doi.org/10.1021/ja011278+
- A. B. Valina,, R. Amunugama,, H. Huang, and, M. T. Rodgers. Collision-Induced Dissociation and Theoretical Studies of Na+−Acetonitrile Complexes. The Journal of Physical Chemistry A 2001, 105 (49) , 11057-11068. https://doi.org/10.1021/jp0128123
- G. Vitale,, A. B. Valina,, H. Huang,, R. Amunugama, and, M. T. Rodgers. Solvation of Copper Ions by Acetonitrile. Structures and Sequential Binding Energies of Cu+(CH3CN)x, x = 1−5, from Collision-Induced Dissociation and Theoretical Studies. The Journal of Physical Chemistry A 2001, 105 (50) , 11351-11364. https://doi.org/10.1021/jp0132432
- R. Amunugama and, M. T. Rodgers. Periodic Trends in the Binding of Metal Ions to Pyrimidine Studied by Threshold Collision-Induced Dissociation and Density Functional Theory. The Journal of Physical Chemistry A 2001, 105 (43) , 9883-9892. https://doi.org/10.1021/jp010663i
- C.A. Austin, M.T. Rodgers. Intrinsic affinities of alkali metal cations for diaza-18-crown-6: Effects of alkali metal cation size and donor atoms on the binding energies. International Journal of Mass Spectrometry 2015, 377 , 64-72. https://doi.org/10.1016/j.ijms.2014.06.033
- . Gas‐Phase Cation Affinity and Basicity Scales. 2009, 323-399. https://doi.org/10.1002/9780470681909.ch6
- Nuwan Hallowita, Estima Udonkang, Chunhai Ruan, C.E. Frieler, M.T. Rodgers. Inductive effects on cation–π interactions: Structures and bond dissociation energies of alkali metal cation–halobenzene complexes. International Journal of Mass Spectrometry 2009, 283 (1-3) , 35-47. https://doi.org/10.1016/j.ijms.2009.01.006
- Xu Wang, Dong-Sheng Yang. Bonding and structures of copper-aminopyridine complexes — High-resolution electron spectroscopy and ab initio calculations. Canadian Journal of Chemistry 2009, 87 (1) , 297-306. https://doi.org/10.1139/v08-146
- M.T. Rodgers, P.B. Armentrout. A critical evaluation of the experimental and theoretical determination of lithium cation affinities. International Journal of Mass Spectrometry 2007, 267 (1-3) , 167-182. https://doi.org/10.1016/j.ijms.2007.02.034
- Zhibo Yang, Chunhai Ruan, H. Ahmed, M.T. Rodgers. Probing the potential energy landscape for dissociation of protonated indole via threshold collision-induced dissociation and theoretical studies. International Journal of Mass Spectrometry 2007, 265 (2-3) , 388-400. https://doi.org/10.1016/j.ijms.2007.06.016
- Zhibo Yang, M.T. Rodgers. Influence of methylation on the properties of uracil and its noncovalent interactions with alkali metal ions. International Journal of Mass Spectrometry 2005, 241 (2-3) , 225-242. https://doi.org/10.1016/j.ijms.2004.11.018
- Michael J.Y. Jarvis, Voislav Blagojevic, Gregory K. Koyanagi, Diethard K. Bohme. Gas-Phase Kinetic Measurements of the Ligation of Ni + , Cu + , Ni(Pyrrole) 1,2 + and Cu(Pyrrole) 1,2 + with CO 2 , D 2 O, NH 3 and NO. European Journal of Mass Spectrometry 2004, 10 (6) , 949-961. https://doi.org/10.1255/ejms.694
- Lorenza Operti, Roberto Rabezzana. Gas-phase ion thermochemistry in organometallic systems. Mass Spectrometry Reviews 2003, 22 (6) , 407-428. https://doi.org/10.1002/mas.10065
- R Amunugama, M.T Rodgers. Influence of substituents on cation-π interactions. 3.. International Journal of Mass Spectrometry 2003, 227 (3) , 339-360. https://doi.org/10.1016/S1387-3806(03)00104-0
- R Amunugama, M.T Rodgers. Cation-π interactions with a model for an extended π network. International Journal of Mass Spectrometry 2003, 227 (1) , 1-20. https://doi.org/10.1016/S1387-3806(03)00039-3
- Lisa A. Hayes, Angelina M. Chappell, Emily E. Jellen, Victor Ryzhov. Binding of metalloporphyrins to model nitrogen bases: collision-induced dissociation and ion–molecule reaction studies. International Journal of Mass Spectrometry 2003, 227 (1) , 111-120. https://doi.org/10.1016/S1387-3806(03)00045-9
- Michael J.Y. Jarvis, Luca F. Pisterzi, Voislav Blagojevic, Gregory K. Koyanagi, Diethard K. Bohme. Gas-phase kinetic measurements and quantum chemical calculations of the ligation of Ni+, Cu+, Ni+(pyrrole)1,2 and Cu+(pyrrole)1,2 with O2 and CO. International Journal of Mass Spectrometry 2003, 227 (1) , 161-173. https://doi.org/10.1016/S1387-3806(03)00046-0
- P. B. Armentrout. Threshold Collision-Induced Dissociations for the Determination of Accurate Gas-Phase Binding Energies and Reaction Barriers. 2003, 233-262. https://doi.org/10.1007/3-540-36113-8_7
- Tom Waters, Richard A. J. O'Hair. 9 Organic gas phase ion chemistry. Annu. Rep. Prog. Chem., Sect. B: Org. Chem. 2002, 98 , 433-501. https://doi.org/10.1039/B110377F