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Competition between Polar and Centrosymmetric Packings in Molecular Crystals: Analysis of Actual and Virtual Structures

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Department of Chemical Sciences, University of Naples ”Federico II”, Via Cintia, I-80126 Naples, Italy
Department of Chemical, Materials and Production Engineering, University of Naples “Federico II”, Piazzale Tecchio, I-80125 Naples, Italy
Cite this: Cryst. Growth Des. 2016, 16, 4, 2260–2265
Publication Date (Web):March 1, 2016
https://doi.org/10.1021/acs.cgd.6b00054
Copyright © 2016 American Chemical Society

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    Abstract

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    Imines obtained by condensation of 4-hydroxybenzohydrazide with aliphatic ketones are a rare example of a class of compounds showing a remarkable tendency to crystallize in acentric polar space groups (Pna21 or Cc). In fact, all of the (seven) compounds studied up to now show at least one polar polymorph. In some cases, polymorphism was detected, and a nonpolar centrosymmetric phase was also identified (P21/c or P21/n space group). With the aim to disclose the conditions that can favor the formation of acentric structures in molecular crystals, we report, in this paper, a theoretical analysis (ab initio density functional theory with periodic boundary) of the lattice energy and density of all the packing modes observed in the whole set of imines. The computational analysis has been performed by optimizing each compound in its own experimental packings (actual crystal structures) and also in the packings of the other compounds of the class (virtual structures). The experimental crystallographic data and the theoretical analysis suggest that two conformers, basically differing for the orientation of the phenolic H atom in the plane of the phenyl ring, compete, in solution, for the formation of polar or centrosymmetric packings. The transitions between polar and centrosymmetric polymorphs are of diffusive type, and single crystals are not preserved, while the transitions between different polar polymorphs can be of single-crystal-to-single-crystal type.

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    The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/acs.cgd.6b00054.

    • Analysis of the polymorphism of 4. Symmetry and topological analysis of H bonding patterns in relation with the different conformation of the imine molecules. Analysis of Hirshfeld fingerprint plots of 4ort and 4mon. Discussion of the optimized actual and virtual structures. 1H NMR spectrum of 4 (PDF)

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    CCDC 14170871417088 contains the supplementary crystallographic data for this paper. These data can be obtained free of charge via www.ccdc.cam.ac.uk/data_request/cif, or by emailing [email protected], or by contacting The Cambridge Crystallographic Data Centre, 12, Union Road, Cambridge CB2 1EZ, UK; fax: +44 1223 336033.

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    Cited By

    This article is cited by 11 publications.

    1. Emmanuele Parisi, Fabio Borbone, Antonio Carella, Stefano Lettieri, Amedeo Capobianco, Andrea Peluso, Roberto Centore. Winning Strategy toward Acentric Crystals: Transverse Dipole Moment Molecules. Crystal Growth & Design 2023, 23 (6) , 4538-4544. https://doi.org/10.1021/acs.cgd.3c00295
    2. Roberto Centore, Fabio Borbone, Antonio Carella, Mauro Causà, Sandra Fusco, Francesco Silvio Gentile, Emmanuele Parisi. Hierarchy of Intermolecular Interactions and Selective Topochemical Reactivity in Different Polymorphs of Fused-Ring Heteroaromatics. Crystal Growth & Design 2020, 20 (2) , 1229-1236. https://doi.org/10.1021/acs.cgd.9b01491
    3. Roberto Centore, Mauro Causà. Translating Microscopic Molecular Motion into Macroscopic Body Motion: Reversible Self-Reshaping in the Solid State Transition of an Organic Crystal. Crystal Growth & Design 2018, 18 (6) , 3535-3543. https://doi.org/10.1021/acs.cgd.8b00337
    4. Mingoo Jin, Toshiki Sumitani, Hiroyasu Sato, Tomohiro Seki, and Hajime Ito . Mechanical-Stimulation-Triggered and Solvent-Vapor-Induced Reverse Single-Crystal-to-Single-Crystal Phase Transitions with Alterations of the Luminescence Color. Journal of the American Chemical Society 2018, 140 (8) , 2875-2879. https://doi.org/10.1021/jacs.7b12455
    5. Francesco Silvio Gentile, Emmanuele Parisi, Roberto Centore. Journeys in crystal energy landscapes: actual and virtual structures in polymorphic 5-nitrobenzo[ c ][1,2,5]thiadiazole. CrystEngComm 2023, 25 (5) , 859-865. https://doi.org/10.1039/D2CE01619B
    6. Jesús A. Lara-Cerón, Víctor M. Jiménez-Pérez, Areli A. Molina-Paredes, Mario Sánchez, H. V. Rasika Dias, Pedro I. Ramírez-Montes, Blanca M. Muñoz-Flores. Preferential intermolecular interactions in a racemic mixture of amino acid Schiff base, conformational structures in solid state, and DFT studies. New Journal of Chemistry 2021, 45 (3) , 1727-1733. https://doi.org/10.1039/D0NJ04720A
    7. Mingoo Jin. Mechanical-Stimulation-Triggered and Solvent-Vapor-Induced Reverse Single-Crystal-to-Single-Crystal Phase Transitions with Alterations of the Luminescence Color. 2020, 127-156. https://doi.org/10.1007/978-981-15-4063-9_5
    8. Pierre Baillargeon, Tarik Rahem, Carl Amigo, Daniel Fortin, Yves L. Dory. Polar crystal of vanillylformamide through replacement of the alkene by an isosteric formamide group. IUCrData 2018, 3 (12) https://doi.org/10.1107/S2414314618016309
    9. Andrea Gionda, Giovanni Macetti, Laura Loconte, Silvia Rizzato, Ahmed M. Orlando, Carlo Gatti, Leonardo Lo Presti. A variable-temperature X-ray diffraction and theoretical study of conformational polymorphism in a complex organic molecule (DTC). RSC Advances 2018, 8 (67) , 38445-38454. https://doi.org/10.1039/C8RA08063A
    10. Mauro Causà, Roberto Centore. Actual and virtual structures in molecular crystals. CrystEngComm 2017, 19 (9) , 1320-1327. https://doi.org/10.1039/C7CE00075H
    11. Jacqueline M. Spaniol, Kraig A. Wheeler. Accessing Centnerszwer's quasiracemate – molecular shape controlled molecular recognition. RSC Advances 2016, 6 (69) , 64921-64929. https://doi.org/10.1039/C6RA08131B

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