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Inhibition of Marburg Virus RNA Synthesis by a Synthetic Anti-VP35 Antibody

  • Parmeshwar Amatya
    Parmeshwar Amatya
    Department of Medicine, Washington University School of Medicine, 660 South Euclid Avenue, St. Louis, Missouri 63110, United States
    Department of Pathology and Immunology, Washington University School of Medicine, 660 South Euclid Avenue, St. Louis, Missouri 63110, United States
  • Nicole Wagner
    Nicole Wagner
    Department of Chemistry, Washington University in St. Louis, 1 Brookings Drive, St. Louis, Missouri 63130, United States
  • Gang Chen
    Gang Chen
    Donnelly Centre for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, 816-160 College Street, Toronto, Ontario M5S 3E1, Canada
    More by Gang Chen
  • Priya Luthra
    Priya Luthra
    Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, 100 Piedmont Avenue, Atlanta, Georgia 30303, United States
    More by Priya Luthra
  • Liuqing Shi
    Liuqing Shi
    Department of Chemistry, Washington University in St. Louis, 1 Brookings Drive, St. Louis, Missouri 63130, United States
    More by Liuqing Shi
  • Dominika Borek
    Dominika Borek
    Department of Biophysics, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, Texas 75390, United States
  • Alevtina Pavlenco
    Alevtina Pavlenco
    Donnelly Centre for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, 816-160 College Street, Toronto, Ontario M5S 3E1, Canada
  • Henry Rohrs
    Henry Rohrs
    Department of Chemistry, Washington University in St. Louis, 1 Brookings Drive, St. Louis, Missouri 63130, United States
    More by Henry Rohrs
  • Christopher F. Basler
    Christopher F. Basler
    Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, 100 Piedmont Avenue, Atlanta, Georgia 30303, United States
  • Sachdev S. Sidhu*
    Sachdev S. Sidhu
    Donnelly Centre for Cellular and Biomolecular Research, Banting and Best Department of Medical Research, University of Toronto, 816-160 College Street, Toronto, Ontario M5S 3E1, Canada
    *E-mail: [email protected] (S.S.S.).
  • Michael L. Gross*
    Michael L. Gross
    Department of Chemistry, Washington University in St. Louis, 1 Brookings Drive, St. Louis, Missouri 63130, United States
    *E-mail: [email protected] (M.L.G.).
  • , and 
  • Daisy W. Leung*
    Daisy W. Leung
    Department of Medicine, Washington University School of Medicine, 660 South Euclid Avenue, St. Louis, Missouri 63110, United States
    Department of Pathology and Immunology, Washington University School of Medicine, 660 South Euclid Avenue, St. Louis, Missouri 63110, United States
    *E-mail: [email protected] (D.W.L.).
Cite this: ACS Infect. Dis. 2019, 5, 8, 1385–1396
Publication Date (Web):May 23, 2019
https://doi.org/10.1021/acsinfecdis.9b00091
Copyright © 2019 American Chemical Society
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Supporting Info (1)»

Abstract

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Marburg virus causes sporadic outbreaks of severe hemorrhagic fever with high case fatality rates. Approved, effective, and safe therapeutic or prophylactic countermeasures are lacking. To address this, we used phage display to engineer a synthetic antibody, sFab H3, which binds the Marburg virus VP35 protein (mVP35). mVP35 is a critical cofactor of the viral replication complex and a viral immune antagonist. sFab H3 displayed high specificity for mVP35 and not for the closely related Ebola virus VP35. sFab H3 inhibited viral-RNA synthesis in a minigenome assay, suggesting its potential use as an antiviral. We characterized sFab H3 by a combination of biophysical and biochemical methods, and a crystal structure of the complex solved to 1.7 Å resolution defined the molecular interface between the sFab H3 and mVP35 interferon inhibitory domain. Our study identifies mVP35 as a therapeutic target using an approach that provides a framework for generating engineered Fabs targeting other viral proteins.

Supporting Information

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The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/acsinfecdis.9b00091.

  • Data-collection and -refinement statistics, peptide-coverage maps for mVP35 IID and sFab H3, HDX-MS heatmaps for mVP35 IID and sFab H3, HDX kinetic curves of mVP35 IID peptides, HDX kinetic curves of sFab H3 light-chain peptides, HDX kinetic curves of sFab H3 heavy-chain peptides, fluorescence-polarization assay for mVP35 IID binding to sFab H3 with dsRNA, and pull-down assay of eVP35 IID mutant binding to sFab H5 (PDF)

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