New fluorescent probe for protein and nucleoprotein conformation. Binding of 7-(p-methoxybenzylamino)-4-nitrobenzoxadiazole to bovine trypsinogen and bacterial ribosomes

R. A. Kenner, and A. A. Aboderin

Biochemistry, 1971, 10 (24), pp 4433–4440

DOI: 10.1021/bi00800a013

Publication Date: November 1971

Cite this:Biochemistry 10, 24, 4433-4440

Note: In lieu of an abstract, this is the article's first page.

Click to increase image size

View: PDF | PDF w/ Links

Citing Articles
Related Content

Citation data is made available by participants in Crossref's Cited-by Linking service. For a more comprehensive list of citations to this article, users are encouraged to perform a search inSciFinder.

Deepening the Topology of the Translocator Protein Binding Site by Novel N,N-Dialkyl-2-arylindol-3-ylglyoxylamides
Elisabetta Barresi, Agostino Bruno, Sabrina Taliani, Sandro Cosconati, Eleonora Da Pozzo, Silvia Salerno, Francesca Simorini, Simona Daniele, Chiara Giacomelli, Anna Maria Marini, Concettina La Motta, Luciana Marinelli, Barbara Cosimelli, Ettore Novellino, Giovanni Greco, Federico Da Settimo, and Claudia Martini
Journal of Medicinal Chemistry 2015 58 (15), 6081-6092
Abstract | Full Text HTML | PDF | PDF w/ Links
Aggregation-Induced Emission Enhancement in Organic Ion Pairs
Jean-François Lamère, Nathalie Saffon, Isabelle Dos Santos and Suzanne Fery-Forgues
Langmuir 2010 26 (12), 10210-10217
Abstract | Full Text HTML | PDF | PDF w/ Links
Fluorescent Analogs of Biomolecular Building Blocks: Design, Properties, and Applications
Renatus W. Sinkeldam, Nicholas J. Greco and Yitzhak Tor
Chemical Reviews 2010 110 (5), 2579-2619
Abstract | Full Text HTML | PDF | PDF w/ Links
Aggregation-Induced Emission Enhancement in Organic Ion Pairs
Jean-François Lamère, Nathalie Saffon, Isabelle Dos Santos and Suzanne Fery-Forgues
Langmuir 0 (proofing),
Abstract | Full Text HTML
Fluorescent Analogs of Biomolecular Building Blocks: Design, Properties, and Applications
Renatus W. Sinkeldam, Nicholas J. Greco and Yitzhak Tor
Chemical Reviews 0 (proofing),
Abstract | Full Text HTML
Chemically Induced Dynamic Electron Polarization Studies of a pH-Dependent Free Radical Cage Formed in a Photoinitiator Labeled Poly(methacrylic acid)
Ashok Maliakal, Matthias Weber, Nicholas J. Turro, Mark M. Green, Sung Yun Yang, Scott Pearsall, and Myung-Jin Lee
Macromolecules 2002 35 (24), 9151-9155
Abstract | Full Text HTML | PDF | PDF w/ Links
A Leucine Zipper Motif in the Ectodomain of Sendai Virus Fusion Protein Assembles in Solution and in Membranes and Specifically Binds Biologically-Active Peptides and the Virus
Jimut Kanti Ghosh, Michael Ovadia, and Yechiel Shai
Biochemistry 1997 36 (49), 15451-15462
Abstract | Full Text HTML | PDF | PDF w/ Links
Coassembly of Synthetic Segments of Shaker K⁺ Channel within Phospholipid Membranes
Hadas Peled-Zehavi, Isaiah T. Arkin, Donald M. Engelman, and Yechiel Shai
Biochemistry 1996 35 (21), 6828-6838
Abstract | Full Text HTML | PDF | PDF w/ Links
Nature of the “Hypercoiled” Form of Poly(methacrylic acid) in Water at Low pH
Herbert Morawetz
Macromolecules 1996 29 (7), 2689-2690
Abstract | Full Text HTML | PDF | PDF w/ Links
Interaction of the Mammalian Antibacterial Peptide Cecropin P1 with Phospholipid Vesicles
Ehud Gazit, Anita Boman, Hans G. Boman, and Yechiel Shai
Biochemistry 1995 34 (36), 11479-11488
Abstract | PDF | PDF w/ Links
Synthetic peptides corresponding to the four P regions of Electrophorus electricus Na+ channel: interaction with and organization in model phospholipid membranes
Yehonathan Pouny and Yechiel Shai
Biochemistry 1995 34 (23), 7712-7721
Abstract | PDF | PDF w/ Links
Spectrum of Antimicrobial Activity and Assembly of Dermaseptin-b and Its Precursor Form in Phospholipid Membranes
Jacob Strahilevitz, Amram Mor, Pierre Nicolas, and Yechiel Shai
Biochemistry 1994 33 (36), 10951-10960
Abstract | PDF | PDF w/ Links
Mode of Action of the Antibacterial Cecropin B2: A Spectrofluorometric Study
Ehud Gazit, Won-Jae Lee, Paul T. Brey, and Yechiel Shai
Biochemistry 1994 33 (35), 10681-10692
Abstract | PDF | PDF w/ Links
Secondary Structure and Membrane Localization of Synthetic Segments and a Truncated Form of the IsK (minK) Protein
Iris Ben-Efraim, Jacob Strahilevitz, Diana Bach, and Yechiel Shai
Biochemistry 1994 33 (22), 6966-6973
Abstract | PDF | PDF w/ Links
Synthetic S-2 and H-5 Segments of the Shaker K+ Channel: Secondary Structure, Membrane Interaction, and Assembly within Phospholipid Membranes
Hadas Peled and Yechiel Shai
Biochemistry 1994 33 (23), 7211-7219
Abstract | PDF | PDF w/ Links
Structural characterization, membrane interaction, and specific assembly within phospholipid membranes of hydrophobic segments from Bacillus thuringiensis var. israelensis cytolytic toxin
Ehud Gazit and Yechiel Shai
Biochemistry 1993 32 (46), 12363-12371
Abstract | PDF | PDF w/ Links
Membrane interaction and self-assembly within phospholipid membranes of synthetic segments corresponding to the H-5 region of the shaker potassium channel
Hadas Peled and Yechiel Shai
Biochemistry 1993 32 (31), 7879-7885
Abstract | PDF | PDF w/ Links
Structural and functional characterization of the .alpha.5 segment of Bacillus thuringiensis .delta.-endotoxin
Ehud Gazit and Yechiel Shai
Biochemistry 1993 32 (13), 3429-3436
Abstract | PDF | PDF w/ Links
Spectroscopic and functional characterization of the putative transmembrane segment of the minK potassium channel
Iris Ben-Efraim, Diana Bach, and Yechiel Shai
Biochemistry 1993 32 (9), 2371-2377
Abstract | PDF | PDF w/ Links
Interaction of antimicrobial dermaseptin and its fluorescently labeled analogs with phospholipid membranes
Yehonathan Pouny, Doron Rapaport, Amram Mor, Pierre Nicolas, and Yechiel Shai
Biochemistry 1992 31 (49), 12416-12423
Abstract | PDF | PDF w/ Links
Determination of the transbilayer distribution of fluorescent lipid analogs by nonradiative fluorescence resonance energy transfer
David E. Wolf, Anthony P. Winiski, Anthony E. Ting, Kristine M. Bocian, Richard E. Pagano
Biochemistry 1992 31 (11), 2865-2873
Abstract | PDF
Spectroscopic and immunochemical studies with nitrobenzoxadiazolealanine, a fluorescent dinitrophenyl analog
Doron Lancet and Israel Pecht
Biochemistry 1977 16 (23), 5150-5157
Abstract | PDF | PDF w/ Links
Relation between fluorescence and conformation of iεNAD⁺ bound to dehydrogenases
Pier L. Luisi, Antonio Baici, Francis J. Bonner, and Akintola A. Aboderin
Biochemistry 1975 14 (2), 362-368
Abstract | PDF | PDF w/ Links
Fluorescent probe studies of haptoglobin type 1-1
Salvatore F. Russo and Wendy W. C. Chen
Biochemistry 1974 13 (26), 5300-5304
Abstract | PDF | PDF w/ Links
Use of newer amino group reagents for the detection and determination of kanamycin
David M. Benjamin, John J. McCormack, and Dieter W. Gump
Analytical Chemistry 1973 45 (8), 1531-1534
Abstract | PDF | PDF w/ Links
Database of Absorption and Fluorescence Spectra of >300 Common Compounds for use in PhotochemCAD
Masahiko Taniguchi, Jonathan S. Lindsey
Photochemistry and Photobiology 2018 94 (2), 290-327
Cholesterol: Revisiting its fluorescent journey on 200th anniversary of Chevruel’s “cholesterine”
Arunima Chaudhuri, Deepak Anand
Biomedical Spectroscopy and Imaging 2017 6 (1-2), 1-24
Electrochemical quenching of the fluorescence produced by NBD-labelled cell penetrating peptides: A contribution to the study of their internalization in large unilamellar vesicles
Raquel de Oliveira, Mathieu Durand, Lylian Challier, Pierluca Messina, Jean Marie Swiecicki, Margherita Di Pisa, Gérard Chassaing, Solange Lavielle, Olivier Buriez, Eric Labbé
Journal of Electroanalytical Chemistry 2017 788, 225-231
Design Principles for SuCESsFul Biosensors: Specific Fluorophore/Analyte Binding and Minimization of Fluorophore/Scaffold Interactions
Seymour de Picciotto, Paige M. Dickson, Michael W. Traxlmayr, Bryan S. Marques, Elke Socher, Sixing Zhao, Stephanie Cheung, Jonathan D. Kiefer, A. Joshua Wand, Linda G. Griffith, Barbara Imperiali, K. Dane Wittrup
Journal of Molecular Biology 2016 428 (20), 4228-4241
Naturally Occurring and Synthetic Fluorescent Biomolecular Building Blocks
Renatus W. Sinkeldam, Yitzhak Tor
2016,15-39
‘Turn On/Off’ fluorescence probe for the screening of unactivated Bruton’s tyrosine kinase
Wataru Kawahata, Tokiko Asami, Ikuo Fujii, Masaaki Sawa
Bioorganic & Medicinal Chemistry Letters 2015 25 (10), 2141-2145
Tuning the hydrophobicity overcomes unfavorable deprotonation making octylamino-substituted 7-nitrobenz-2-oxa-1,3-diazole (n-octylamino-NBD) a protonophore and uncoupler of oxidative phosphorylation in mitochondria
Stepan S. Denisov, Elena A. Kotova, Ljudmila S. Khailova, Galina A. Korshunova, Yuri N. Antonenko
Bioelectrochemistry 2014 98, 30-38
Fluorescent Sensory Microparticles that “Light-up” Consisting of a Silica Core and a Molecularly Imprinted Polymer (MIP) Shell
Wei Wan, Mustafa Biyikal, Ricarda Wagner, Börje Sellergren, Knut Rurack
Angewandte Chemie International Edition 2013 52 (27), 7023-7027
Sensorische Mikropartikel aus einem Silicatkern und einem molekular geprägten Polymer als Schale mit aufleuchtender Fluoreszenz
Wei Wan, Mustafa Biyikal, Ricarda Wagner, Börje Sellergren, Knut Rurack
Angewandte Chemie 2013 125 (27), 7161-7165
Fluorescence Technologies for Monitoring Interactions Between Biological Molecules In Vitro
Sebastien. Deshayes, Gilles. Divita
2013,109-143
A Synthetic S6 Segment Derived from KvAP Channel Self-assembles, Permeabilizes Lipid Vesicles, and Exhibits Ion Channel Activity in Bilayer Lipid Membrane
Richa Verma, Chetan Malik, Sarfuddin Azmi, Saurabh Srivastava, Subhendu Ghosh, Jimut Kanti Ghosh
Journal of Biological Chemistry 2011 286 (28), 24828-24841
Phospholipid membrane-interaction of a peptide from S4 segment of KvAP K+ channel and the influence of the positive charges and an identified heptad repeat in its interaction with a S3 peptide
Richa Verma, Jimut Kanti Ghosh
Biochimie 2011 93 (6), 1001-1011
Structural and functional changes in a synthetic S5 segment of KvLQT1 channel as a result of a conserved amino acid substitution that occurs in LQT1 syndrome of human
Richa Verma, Jimut Kanti Ghosh
Biochimica et Biophysica Acta (BBA) - Biomembranes 2010 1798 (3), 461-470
The Influence of Neuroactive Steroid Lipophilicity on GABA A Receptor Modulation: Evidence for a Low-Affinity Interaction
Mariangela Chisari, Lawrence N. Eisenman, Kathiresan Krishnan, Achintya K. Bandyopadhyaya, Cunde Wang, Amanda Taylor, Ann Benz, Douglas F. Covey, Charles F. Zorumski, Steven Mennerick
Journal of Neurophysiology 2009 102 (2), 1254-1264
A peptide derived from the putative transmembrane domain in the tail region of E. coli toxin hemolysin E assembles in phospholipid membrane and exhibits lytic activity to human red blood cells: Plausible implications in the toxic activity of the protein
Sharada Prasad Yadav, Aqeel Ahmad, Brijesh Kumar Pandey, Dharamsheela Singh, Neeta Asthana, Richa Verma, Raj Kamal Tripathi, Jimut Kanti Ghosh
Biochimica et Biophysica Acta (BBA) - Biomembranes 2009 1788 (2), 538-550
Effects on Membrane Capacitance of Steroids with Antagonist Properties at GABAA Receptors
Steven Mennerick, Michael Lamberta, Hong-Jin Shu, Joshua Hogins, Cunde Wang, Douglas F. Covey, Lawrence N. Eisenman, Charles F. Zorumski
Biophysical Journal 2008 95 (1), 176-185
Bactericidal Permeability-Increasing Protein in Host Defence Against Gram-negative Bacteria and Endotoxin
Peter Elsbach
2007,176-196
Addition of a small hydrophobic segment from the head region to an amphipathic leucine zipper like motif of E. coli toxin hemolysin E enhances the peptide-induced permeability of zwitterionic lipid vesicles
Sharada Prasad Yadav, Aqeel Ahmad, Jimut Kanti Ghosh
Biochimica et Biophysica Acta (BBA) - Biomembranes 2007 1768 (6), 1574-1582
Identification and Characterization of an Amphipathic Leucine Zipper-like Motif in Escherichia coli Toxin Hemolysin E
Sharada Prasad Yadav, Bijoy Kundu, Jimut Kanti Ghosh
Journal of Biological Chemistry 2003 278 (51), 51023-51034
Synthesis of 4-aryloxy-7-nitrobenzofurazan derivatives from 4-chloro-7-nitrobenzofurazan and various phenoxide anions (including pharmaceuticals) in the presence of crown ethers
Marioara Bem, Miron Caproiu, Dan Stoicescu, Titus Constantinescu, Alexandru Balaban
Open Chemistry 2003 1 (3),
Syntheses and Characterizations of 4-(3,17 .BETA.-Dihydroxyestra-1,3,5(10)-trien-6.ALPHA.- and 6.BETA.-yl)amino-7-nitro-2,1,3-benzoxadiazoles as Fluorescent Probes.
Tomoyuki OE, Miki IKUTA, Toshimasa TOYO’OKA
Analytical Sciences 2002 18 (2), 161-165
Dual Labeling of a Binding Protein Allows for Specific Fluorescence Detection of Native Protein
Amelie Karlström, Per-Åke Nygren
Analytical Biochemistry 2001 295 (1), 22-30
Mechanism of the binding, insertion and destabilization of phospholipid bilayer membranes by α-helical antimicrobial and cell non-selective membrane-lytic peptides
Yechiel Shai
Biochimica et Biophysica Acta (BBA) - Biomembranes 1999 1462 (1-2), 55-70
Direct Evidence that the N-Terminal Heptad Repeat of Sendai Virus Fusion Protein Participates in Membrane Fusion
Jimut Kanti Ghosh, Yechiel Shai
Journal of Molecular Biology 1999 292 (3), 531-546
A Novel Bi-Functional Fluorescent Probe for Hydrophobicity and Alkali Metal Ions.
Tomoyuki OE, Mitsuru MORITA, Toshimasa TOYO’OKA
Analytical Sciences 1999 15 (10), 1021-1023
Structure-Function Study of a Heptad Repeat Positioned Near the Transmembrane Domain of Sendai Virus Fusion Protein Which Blocks Virus-Cell Fusion
Jimut Kanti Ghosh, Sergio Gerardo Peisajovich, Michael Ovadia, Yechiel Shai
Journal of Biological Chemistry 1998 273 (42), 27182-27190
A Peptide Derived from a Conserved Domain of Sendai Virus Fusion Protein Inhibits Virus-Cell Fusion
Jimut Kanti Ghosh, Yechiel Shai
Journal of Biological Chemistry 1998 273 (13), 7252-7259
Selective Cytotoxicity of Dermaseptin S3 toward Intraerythrocytic Plasmodium falciparum and the Underlying Molecular Basis
Jimut Kanti Ghosh, Dan Shaool, Philippe Guillaud, Liliane Cic?ron, Dominique Mazier, Irina Kustanovich, Yechiel Shai, Amram Mor
Journal of Biological Chemistry 1997 272 (50), 31609-31616
Complexation Studies of Water-soluble Calixarenes and Auramine O Dye
Yuling Zhang, Rezik A. Agbaria, Isiah M. Warner
Supramolecular Chemistry 1997 8 (4), 309-318
Fluorescent and biotinylated analogues of docetaxel: Synthesis and biological evaluation
Joëlle Dubois, Marie-Thérèse Le Goff, Françoise Guéritte-Voegelein, Daniel Guénard, Yvette Tollon, Michel Wright
Bioorganic & Medicinal Chemistry 1995 3 (10), 1357-1368
The Assembly and Organization of the ?5 and ?7 Helices from the Pore-forming Domain of Bacillusthuringiensis ?-Endotoxin
Ehud Gazit, Yechiel Shai
Journal of Biological Chemistry 1995 270 (6), 2571-2578
Mechanisms for the modulation of membrane bilayer properties by amphipathic helical peptides
Richard M. Epand, Yechiel Shai, Jere P. Segrest, G. M. Anantharamiah
Biopolymers 1995 37 (5), 319-338
Secretory proteins move through the endoplasmic reticulum membrane via an aqueous, gated pore
Kathleen S. Crowley, Shuren Liao, Veronica E. Worrell, Gregory D. Reinhart, Arthur E. Johnson
Cell 1994 78 (3), 461-471
A galactose-binding T-cell mitogenic lectin from the seeds of Telfairia occidentalis
R. Adetoro Togun, Theresa Animashaun, John E. Kay, Akintola A. Aboderin
Phytochemistry 1994 35 (5), 1125-1130
Pardaxin: channel formation by a shark repellant peptide from fish
Yechiel Shai
Toxicology 1994 87 (1-3), 109-129
The signal sequence moves through a ribosomal tunnel into a noncytoplasmic aqueous environment at the ER membrane early in translocation
Kathleen S. Crowley, Gregory D. Reinhart, Arthur E. Johnson
Cell 1993 73 (6), 1101-1115
Effect of humidity on the fluorescence properties of a medium- sensitive fluorophore in a hydrophilic polymer film
Soichi Otsuki, Kimihiro Adachi
Journal of Photochemistry and Photobiology A: Chemistry 1993 71 (2), 169-173
Drastic changes in the fluorescence properties of NBD probes with the polarity of the medium: involvement of a TICT state?
Suzanne Fery-Forgues, Jean-Pierre Fayet, André Lopez
Journal of Photochemistry and Photobiology A: Chemistry 1993 70 (3), 229-243
Modification of gelsolin with 4-fluoro-7-nitrobenz-2-oxa-1,3-diazole
Yukio DOI, Tomoko HASHIMOTO, Hisako YAMAGUCHI, Aline VERTUT-DOI
European Journal of Biochemistry 1991 199 (2), 277-283
Chemistry and biology of N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)-labeled lipids: fluorescent probes of biological and model membranes
Amitabha Chattopadhyay
Chemistry and Physics of Lipids 1990 53 (1), 1-15
Chapter 17 Multiple Spectral Parameter Imaging
A. Waggoner, R.De Biasio, P. Conrad, G.R. Bright, L. Ernst, K. Ryan, M. Nederlof, D. Taylor
1989,449-478
UV-VIS- und IR-spektroskopische Untersuchungen an N-substituierten 4-Amino-7-nitrobenz-2,1,3-oxadiazolen
H. Heberer, H. Matschiner
Journal f�r Praktische Chemie 1986 328 (2), 261-274
Polymer-bound flavins: 5. Characterization by static and time-resolved fluorescence techniques
J.P.C Bootsma, G Challa, A.J.W.G Visser, F Müller
Polymer 1985 26 (6), 951-958
Lipid-specific fluorescent probes in studies of biological membranes
L.D. Bergelson, Jul.G. Molotkovsky, Y.M. Manevich
Chemistry and Physics of Lipids 1985 37 (2), 165-195
Derivatisierung von Aminen mit 4-substituierten 7-Nitrobenz-2,1,3-oxadiazolen
H. Heberer, H. Kersting, H. Matschiner
Journal f�r Praktische Chemie 1985 327 (3), 487-504
Formation of a conformationally changed C1r, a subcomponent of the first component of human complement, as an intermediate of its autoactivation reaction
Yoshinori Kasahara, Kazuhiko Takahashi, Shigeharu Nagasawa, Jiro Koyama
FEBS Letters 1982 141 (1), 128-131
Ammonium 4-chloro-7-sulfobenzofurazan: A new fluorigenic thiol-specific reagent
John L. Andrews, Peter Ghosh, Bela Ternai, Michael W. Whitehouse
Archives of Biochemistry and Biophysics 1982 214 (1), 386-396
Selective arylation of cysteine-237 of rabbit muscle aldolase with 4-chloro-7-nitrobenzofurazan
Pierre Wong, Edwin T. Harper
Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology 1982 700 (1), 33-41
Optical Spectroscopy of Proteins
CHARLES R. CANTOR, SERGE N. TIMASHEFF
1982,145-306
Benzofurazans and benzofuroxans: Biochemical and pharmacological properties
Peter Ghosh, Bela Ternai, Michael Whitehouse
Medicinal Research Reviews 1981 1 (2), 159-187
NEW REACTION OF 4-CHLORO-7-NITROBENZOFURAZAN WITH AMINES AT HIGH LOCAL CONCENTRATIONS
JAKE BELLO, HELEN PATRZYC
International Journal of Peptide and Protein Research 1980 15 (5), 464-470
Instrumentation for differential fluorescence spectroscopy
Keith A. Bostian
Analytical Biochemistry 1977 82 (2), 353-361
Fluorescence properties of 2′ (or 3′)-O-(2,4,6-trinitrophenyl) adenosine 5′-triphosphate and its use in the study of binding to heavy meromyosin ATPase
T. Hiratsuka
Biochimica et Biophysica Acta (BBA) - Protein Structure 1976 453 (1), 293-297
Reaction of chicken egg white lysozyme with 7-chloro-4-nitrobenz-2-oxa-1,3-diazole
A.A. Aboderin, E. Boedefeld, P.L. Luisi
Biochimica et Biophysica Acta (BBA) - Protein Structure 1973 328 (1), 20-30
Base-promoted cleavage of α-N-NBD-peptides
A.A. Aboderin, R.E.K. Semakula
FEBS Letters 1973 34 (1), 90-94
Molecular interactions and structure as analysed by fluorescence relaxation spectroscopy
Rudolf Rigler, Måns Ehrenberg
Quarterly Reviews of Biophysics 1973 6 (02), 139
A protein-nucleic acid crosslink in 30s ribosomes
R.A. Kenner
Biochemical and Biophysical Research Communications 1973 51 (4), 932-938

Article

New fluorescent probe for protein and nucleoprotein conformation. Binding of 7-(p-methoxybenzylamino)-4-nitrobenzoxadiazole to bovine trypsinogen and bacterial ribosomes

Explore by:

Metrics

This website uses cookies to improve your user experience. By continuing to use the site, you are accepting our use of cookies. Read the ACS privacy policy.

Products

User Resources

Support

Partners