ACS Publications. Most Trusted. Most Cited. Most Read

OR SEARCH CITATIONS

My Activity
Publications
CONTENT TYPES

Figure 1Loading Img
Download Hi-Res ImageDownload to MS-PowerPointCite This:Biochemistry 2015, 54, 2, 171-183
RETURN TO ISSUEPREVCurrent TopicNEXT

Clocks in Algae

View Author Information
SynthSys and School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3BF, United Kingdom
*SynthSys, University of Edinburgh, C. H. Waddington Building, The King’s Buildings, Mayfield Road, Edinburgh EH9 3BF, United Kingdom. E-mail: [email protected]. Telephone: +44 (0)131 651 3325.
Cite this: Biochemistry 2015, 54, 2, 171–183
Publication Date (Web):November 7, 2014
https://doi.org/10.1021/bi501089x
Copyright © 2014 American Chemical Society
Request reuse permissions

    Article Views

    2044

    Altmetric

    -

    Citations

    37
    LEARN ABOUT THESE METRICS
    Read OnlinePDF (2 MB)
    Get e-Alerts
    SUBJECTS:

    Abstract

    Abstract Image

    As major contributors to global oxygen levels and producers of fatty acids, carotenoids, sterols, and phycocolloids, algae have significant ecological and commercial roles. Early algal models have contributed much to our understanding of circadian clocks at physiological and biochemical levels. The genetic and molecular approaches that identified clock components in other taxa have not been as widely applied to algae. We review results from seven species: the chlorophytes Chlamydomonas reinhardtii, Ostreococcus tauri, and Acetabularia spp.; the dinoflagellates Lingulodinium polyedrum and Symbiodinium spp.; the euglenozoa Euglena gracilis; and the red alga Cyanidioschyzon merolae. The relative simplicity, experimental tractability, and ecological and evolutionary diversity of algal systems may now make them particularly useful in integrating quantitative data from “omic” technologies (e.g., genomics, transcriptomics, metabolomics, and proteomics) with computational and mathematical methods.

    Cited By

    This article is cited by 37 publications.

    1. Luíza Lane de Barros Dantas, Bethany M. Eldridge, Jack Dorling, Richard Dekeya, Deirdre A. Lynch, Antony N. Dodd. Circadian regulation of metabolism across photosynthetic organisms. The Plant Journal 2023, 2 https://doi.org/10.1111/tpj.16405
    2. Zeenat B Noordally, Matthew M Hindle, Sarah F Martin, Daniel D Seaton, T Ian Simpson, Thierry Le Bihan, Andrew J Millar, . A phospho-dawn of protein modification anticipates light onset in the picoeukaryote Ostreococcus tauri. Journal of Experimental Botany 2023, 2 https://doi.org/10.1093/jxb/erad290
    3. Paolo Pupillo, Francesca Sparla, Bruno A. Melandri, Paolo Trost. The circadian night depression of photosynthesis analyzed in a herb, Pulmonaria vallarsae. Day/night quantitative relationships. Photosynthesis Research 2022, 154 (2) , 143-153. https://doi.org/10.1007/s11120-022-00956-1
    4. Dinesh Balasaheb Jadhav, Yoshita Sriramkumar, Sougata Roy. The enigmatic clock of dinoflagellates, is it unique?. Frontiers in Microbiology 2022, 13 https://doi.org/10.3389/fmicb.2022.1004074
    5. Jan Petersen, Anxhela Rredhi, Julie Szyttenholm, Maria Mittag. Evolution of circadian clocks along the green lineage. Plant Physiology 2022, 190 (2) , 924-937. https://doi.org/10.1093/plphys/kiac141
    6. Shufeng Zhang, Yue Wu, Lin Lin, Dazhi Wang. Molecular insights into the circadian clock in marine diatoms. Acta Oceanologica Sinica 2022, 41 (8) , 87-98. https://doi.org/10.1007/s13131-021-1962-4
    7. Olivia H. Hewitt, Hisham M. Shaikh. The Rhythm of Many: Biological Rhythms in the Marine Environment, From Macro-Scale Planktonic Ecosystems to Micro-Scale Holobionts. Frontiers in Marine Science 2021, 8 https://doi.org/10.3389/fmars.2021.744169
    8. Shota Kato, Hong Gil Nam. The Cell Division Cycle of Euglena gracilis Indicates That the Level of Circadian Plasticity to the External Light Regime Changes in Prolonged-Stationary Cultures. Plants 2021, 10 (7) , 1475. https://doi.org/10.3390/plants10071475
    9. Sacha N. Coesel, Bryndan P. Durham, Ryan D. Groussman, Sarah K. Hu, David A. Caron, Rhonda L. Morales, François Ribalet, E. Virginia Armbrust. Diel transcriptional oscillations of light-sensitive regulatory elements in open-ocean eukaryotic plankton communities. Proceedings of the National Academy of Sciences 2021, 118 (6) https://doi.org/10.1073/pnas.2011038118
    10. Yohei Shimasaki, Koki Mukai, Yuki Takai, Xuchun Qiu, Yuji Oshima. Recent Progress in the Study of Peroxiredoxin in the Harmful Algal Bloom Species Chattonella marina. Antioxidants 2021, 10 (2) , 162. https://doi.org/10.3390/antiox10020162
    11. I. Pinto, S. Rodrigues, O.M. Lage, S.C. Antunes. Assessment of water quality in Aguieira reservoir: Ecotoxicological tools in addition to the Water Framework Directive. Ecotoxicology and Environmental Safety 2021, 208 , 111583. https://doi.org/10.1016/j.ecoenv.2020.111583
    12. Takuya Matsuo, Takahiro Iida, Ayumi Ohmura, Malavika Gururaj, Daisaku Kato, Risa Mutoh, Kunio Ihara, Masahiro Ishiura, . The role of ROC75 as a daytime component of the circadian oscillator in Chlamydomonas reinhardtii. PLOS Genetics 2020, 16 (6) , e1008814. https://doi.org/10.1371/journal.pgen.1008814
    13. Xuchun Qiu, Koki Mukai, Yohei Shimasaki, Min Wu, Chen Chen, Yijiang Lu, Hirofumi Ichinose, Takashi Nakashima, Yoko Kato-Unoki, Yuji Oshima. Diurnal variations in expression of photosynthesis-related proteins in the harmful Raphidophyceae Chattonella marina var. antiqua. Journal of Experimental Marine Biology and Ecology 2020, 527 , 151361. https://doi.org/10.1016/j.jembe.2020.151361
    14. Alexandre Barnett, Vona Méléder, Christine Dupuy, Johann Lavaud. The Vertical Migratory Rhythm of Intertidal Microphytobenthos in Sediment Depends on the Light Photoperiod, Intensity, and Spectrum: Evidence for a Positive Effect of Blue Wavelengths. Frontiers in Marine Science 2020, 7 https://doi.org/10.3389/fmars.2020.00212
    15. Michaela Böhm, Georg Kreimer. Orient in the World with a Single Eye: The Green Algal Eyespot and Phototaxis. 2020, 259-304. https://doi.org/10.1007/124_2020_38
    16. Daichi Morimoto, Sigitas Šulčius, Kento Tominaga, Takashi Yoshida. Predetermined clockwork microbial worlds: Current understanding of aquatic microbial diel response from model systems to complex environments. 2020, 163-191. https://doi.org/10.1016/bs.aambs.2020.06.001
    17. Lorraine Archer, Dónal Mc Gee, Andrea Paskuliakova, Gary R. McCoy, Thomas Smyth, Eoin Gillespie, Nicolas Touzet. Fatty acid profiling of new Irish microalgal isolates producing the high-value metabolites EPA and DHA. Algal Research 2019, 44 , 101671. https://doi.org/10.1016/j.algal.2019.101671
    18. Ramesh Kakarla, Booki Min. Sustainable electricity generation and ammonium removal by microbial fuel cell with a microalgae assisted cathode at various environmental conditions. Bioresource Technology 2019, 284 , 161-167. https://doi.org/10.1016/j.biortech.2019.03.111
    19. Eric Poliner, Cameron Cummings, Linsey Newton, Eva M. Farré. Identification of circadian rhythms in Nannochloropsis species using bioluminescence reporter lines. The Plant Journal 2019, 99 (1) , 112-127. https://doi.org/10.1111/tpj.14314
    20. Rossella Annunziata, Andrés Ritter, Antonio Emidio Fortunato, Alessandro Manzotti, Soizic Cheminant-Navarro, Nicolas Agier, Marie J. J. Huysman, Per Winge, Atle M. Bones, François-Yves Bouget, Marco Cosentino Lagomarsino, Jean-Pierre Bouly, Angela Falciatore. bHLH-PAS protein RITMO1 regulates diel biological rhythms in the marine diatom Phaeodactylum tricornutum. Proceedings of the National Academy of Sciences 2019, 116 (26) , 13137-13142. https://doi.org/10.1073/pnas.1819660116
    21. Eun Jae Kim, Woongsic Jung, Suyoun Lim, Sanghee Kim, Han-Gu Choi, Se Jong Han. Lipid Production by Arctic Microalga Chlamydomonas sp. KNF0008 at Low Temperatures. Applied Biochemistry and Biotechnology 2019, 188 (2) , 326-337. https://doi.org/10.1007/s12010-018-2921-1
    22. Daniela Strenkert, Stefan Schmollinger, Sean D. Gallaher, Patrice A. Salomé, Samuel O. Purvine, Carrie D. Nicora, Tabea Mettler-Altmann, Eric Soubeyrand, Andreas P. M. Weber, Mary S. Lipton, Gilles J. Basset, Sabeeha S. Merchant. Multiomics resolution of molecular events during a day in the life of Chlamydomonas. Proceedings of the National Academy of Sciences 2019, 116 (6) , 2374-2383. https://doi.org/10.1073/pnas.1815238116
    23. Ibrahim Halil Kavakli, Nuri Ozturk, Seref Gul. DNA repair by photolyases. 2019, 1-19. https://doi.org/10.1016/bs.apcsb.2018.10.003
    24. Sarah D'Adamo, Gino Schiano di Visconte, Gavin Lowe, Joanna Szaub‐Newton, Tracey Beacham, Andrew Landels, Michael J. Allen, Andrew Spicer, Michiel Matthijs. Engineering the unicellular alga Phaeodactylum tricornutum for high‐value plant triterpenoid production. Plant Biotechnology Journal 2019, 17 (1) , 75-87. https://doi.org/10.1111/pbi.12948
    25. Richard T. Smith, D. James Gilmour. The influence of exogenous organic carbon assimilation and photoperiod on the carbon and lipid metabolism of Chlamydomonas reinhardtii. Algal Research 2018, 31 , 122-137. https://doi.org/10.1016/j.algal.2018.01.020
    26. Evelyne Derelle, Sheree Yau, Hervé Moreau, Nigel H. Grimsley, . Prasinovirus Attack of Ostreococcus Is Furtive by Day but Savage by Night. Journal of Virology 2018, 92 (4) https://doi.org/10.1128/JVI.01703-17
    27. Volker Wagner, Maria Mittag. Growth of Chlamydomonas reinhardtii under Circadian Conditions. BIO-PROTOCOL 2018, 8 (16) https://doi.org/10.21769/BioProtoc.2982
    28. Marianne Jaubert, Jean-Pierre Bouly, Maurizio Ribera d’Alcalà, Angela Falciatore. Light sensing and responses in marine microalgae. Current Opinion in Plant Biology 2017, 37 , 70-77. https://doi.org/10.1016/j.pbi.2017.03.005
    29. Paul Brouwer, Andrea Bräutigam, Valerie A. Buijs, Anne O. E. Tazelaar, Adrie van der Werf, Urte Schlüter, Gert-Jan Reichart, Anthony Bolger, Björn Usadel, Andreas P. M. Weber, Henriette Schluepmann. Metabolic Adaptation, a Specialized Leaf Organ Structure and Vascular Responses to Diurnal N2 Fixation by Nostoc azollae Sustain the Astonishing Productivity of Azolla Ferns without Nitrogen Fertilizer. Frontiers in Plant Science 2017, 8 https://doi.org/10.3389/fpls.2017.00442
    30. Martin Egli. Architecture and mechanism of the central gear in an ancient molecular timer. Journal of The Royal Society Interface 2017, 14 (128) , 20161065. https://doi.org/10.1098/rsif.2016.1065
    31. Sarah R. Smith, Jeroen T. F. Gillard, Adam B. Kustka, John P. McCrow, Jonathan H. Badger, Hong Zheng, Ashley M. New, Chris L. Dupont, Toshihiro Obata, Alisdair R. Fernie, Andrew E. Allen, . Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation. PLOS Genetics 2016, 12 (12) , e1006490. https://doi.org/10.1371/journal.pgen.1006490
    32. Bruno MC Martins, Arijit K Das, Liliana Antunes, James CW Locke. Frequency doubling in the cyanobacterial circadian clock. Molecular Systems Biology 2016, 12 (12) https://doi.org/10.15252/msb.20167087
    33. Elizabeth A. C. Heath-Heckman. The Metronome of Symbiosis: Interactions Between Microbes and the Host Circadian Clock. Integrative and Comparative Biology 2016, 56 (5) , 776-783. https://doi.org/10.1093/icb/icw067
    34. Shigekatsu Suzuki, Ken-Ichiro Ishida, Yoshihisa Hirakawa. Diurnal Transcriptional Regulation of Endosymbiotically Derived Genes in the Chlorarachniophyte Bigelowiella natans. Genome Biology and Evolution 2016, 8 (9) , 2672-2682. https://doi.org/10.1093/gbe/evw188
    35. Andrew J. Millar. The Intracellular Dynamics of Circadian Clocks Reach for the Light of Ecology and Evolution. Annual Review of Plant Biology 2016, 67 (1) , 595-618. https://doi.org/10.1146/annurev-arplant-043014-115619
    36. Stephanie Mijangos-Moreno, Alwin Poot-Aké, Andrea Sarro-Ramírez, Ramsés Jiménez-Moreno, Elda Pacheco-Pantoja, Pedro Aquino-Hernández, Mireille Salas-Crisóstomo, Oscar Arias-Carrión, Eric Murillo-Rodríguez. Circadian and sleep-deprivation variations of monophosphorylated MAP-Kinase in hypothalamus and pons of rats. Biological Rhythm Research 2015, 46 (5) , 763-770. https://doi.org/10.1080/09291016.2015.1052651
    37. Eric A. Johnson, Juliette T.J. Lecomte. The Haemoglobins of Algae. 2015, 177-234. https://doi.org/10.1016/bs.ampbs.2015.08.003
    Download PDF

    Pair your accounts.

    Export articles to Mendeley

    Get article recommendations from ACS based on references in your Mendeley library.

    Pair your accounts.

    Export articles to Mendeley

    Get article recommendations from ACS based on references in your Mendeley library.

    You’ve supercharged your research process with ACS and Mendeley!

    STEP 1:
    Click to create an ACS ID

    Please note: If you switch to a different device, you may be asked to login again with only your ACS ID.

    Please note: If you switch to a different device, you may be asked to login again with only your ACS ID.

    Please note: If you switch to a different device, you may be asked to login again with only your ACS ID.

    MENDELEY PAIRING EXPIRED
    Your Mendeley pairing has expired. Please reconnect