Communication

Selective Recognition of Unnatural Imidazopyridopyrimidine:Naphthyridine Base Pairs Consisting of Four Hydrogen Bonds by the Klenow Fragment

Graduate School of Pharmaceutical Sciences, Hokkaido University, Sapporo, Japan
J. Am. Chem. Soc., 2009, 131 (5), pp 1644–1645
DOI: 10.1021/ja807391g
Publication Date (Web): January 15, 2009
Copyright © 2009 American Chemical Society

Abstract

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In this work, we investigated how thermally stable ImON:NaNO and ImNO:NaON pairs are recognized by the Klenow fragment (KF). As a result, these complementary base pairs, especially the ImNO:NaON pair, were recognized selectively due to the four hydrogen bonds between the nucleobases and the shape complementarity of the Im:Na pair similar to the purine:pyrimidine base pair.

Synthesis of noncanonical nucleoside 5′-triphosphates and conditions applied in enzymatic incorporation. This material is available free of charge via the Internet at http://pubs.acs.org.

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Article Views: 1,341 Times
Received 18 September 2008
Published online 15 January 2009
Published in print 11 February 2009
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